Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 4.1e-54 214.5 114 100.0
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 6.0e-37 157.5 115 80.9
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 5.6e-27 124.4 114 65.8
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 9.6e-27 123.6 112 65.2
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 1.1e-25 120.2 114 62.3
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 4.0e-25 118.2 113 61.9
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 4.4e-24 114.8 113 63.7
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 4.4e-24 114.8 113 61.9
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 4.4e-24 114.8 117 59.8
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 4.9e-23 111.3 112 62.5
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 6.4e-23 110.9 112 62.5
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 1.1e-22 110.2 112 59.8
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 1.1e-22 110.2 117 58.1
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 1.1e-22 110.2 110 62.7
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 1.9e-22 109.4 114 60.5
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.9e-22 109.4 113 63.7
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 3.2e-22 108.6 81 76.5
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 3.2e-22 108.6 113 57.5
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 5.4e-22 107.8 112 60.7
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 5.4e-22 107.8 110 60.9
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 5.4e-22 107.8 110 60.9
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 5.4e-22 107.8 110 60.9
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 5.4e-22 107.8 113 62.8
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 1.2e-21 106.7 114 57.9
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 1.2e-21 106.7 112 58.0
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 1.2e-21 106.7 114 56.1
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 1.6e-21 106.3 113 60.2
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 1.6e-21 106.3 110 61.8
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 1.6e-21 106.3 115 58.3
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 4.6e-21 104.8 112 58.9
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 6.0e-21 104.4 111 57.7
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 2.3e-20 102.4 113 60.2
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 5.1e-20 101.3 112 58.0
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 6.6e-20 100.9 113 56.6
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 2.5e-19 99.0 110 59.1
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 2.5e-19 99.0 114 58.8
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 4.3e-19 98.2 114 57.0
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 4.3e-19 98.2 111 57.7
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 5.6e-19 97.8 115 56.5
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 1.3e-18 96.7 110 56.4
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 1.6e-18 96.3 113 56.6
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 2.1e-18 95.9 112 55.4
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 2.1e-18 95.9 116 55.2
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 3.6e-18 95.1 112 55.4
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 3.6e-18 95.1 115 53.9
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 8.1e-18 94.0 115 53.0
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 8.1e-18 94.0 84 64.3
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 1.1e-17 93.6 83 65.1
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 1.4e-17 93.2 122 48.4
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 2.4e-17 92.4 110 54.5
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 3.1e-17 92.0 110 57.3
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 5.3e-17 91.3 114 51.8
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 6.9e-17 90.9 111 51.4
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 9.0e-17 90.5 83 63.9
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 1.2e-16 90.1 116 53.4
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 1.5e-16 89.7 110 53.6
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 3.4e-16 88.6 115 53.9
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 4.5e-16 88.2 122 48.4
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 5.8e-16 87.8 83 61.4
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 7.6e-16 87.4 84 60.7
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 7.6e-16 87.4 116 50.9
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 9.9e-16 87.0 128 46.9
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 1.3e-15 86.7 115 49.6
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 1.7e-15 86.3 115 48.7
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 8.4e-15 84.0 110 50.0
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 1.1e-14 83.6 113 48.7
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 1.1e-14 83.6 81 63.0
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 1.4e-14 83.2 110 49.1
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 1.4e-14 83.2 113 49.6
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 1.9e-14 82.8 114 49.1
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 1.9e-14 82.8 130 49.2
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 5.4e-14 81.3 110 50.0
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 5.4e-14 81.3 110 49.1
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 9.3e-14 80.5 122 47.5
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 1.2e-13 80.1 110 49.1
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 1.2e-13 80.1 120 49.2
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 1.6e-13 79.7 114 48.2
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 2.1e-13 79.3 75 61.3
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 2.7e-13 79.0 110 46.4
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 3.5e-13 78.6 110 46.4
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 3.5e-13 78.6 110 46.4
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 3.5e-13 78.6 110 46.4
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 4.6e-13 78.2 129 41.9
Lju2566A1T42 Lonicera japonica HOM05D006579 ORTHO05D007783 4.6e-13 78.2 113 49.6
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 4.6e-13 78.2 110 50.0
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 7.9e-13 77.4 121 45.5
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 7.9e-13 77.4 110 45.5
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 7.9e-13 77.4 110 45.5
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 2.3e-12 75.9 110 45.5
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 2.3e-12 75.9 116 49.1
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 2.3e-12 75.9 81 58.0
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 3.0e-12 75.5 130 44.6
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 3.9e-12 75.1 115 42.6
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 3.9e-12 75.1 115 42.6
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 3.9e-12 75.1 96 51.0
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 8.7e-12 73.9 113 45.1
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 4.3e-11 71.6 132 42.4
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 5.6e-11 71.2 110 44.5
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 5.6e-11 71.2 110 44.5
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 5.6e-11 71.2 110 44.5
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 5.6e-11 71.2 110 44.5
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 5.6e-11 71.2 120 40.8
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 7.4e-11 70.9 113 46.0
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 1.6e-10 69.7 126 42.1
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 4.8e-10 68.2 127 41.7
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 8.1e-10 67.4 110 42.7
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 3.4e-08 62.0 114 43.9
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 2.2e-07 59.3 41 80.5
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 9.3e-06 53.9 99 39.4


User provided reference genes

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