Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr0082s0280 Medicago truncatula HOM05D002965 ORTHO05D010183 4.3e-40 167.5 84 100.0
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 4.3e-40 167.5 84 100.0
RcHm_v2.0_MTg0499241 Rosa chinensis HOM05D002965 ORTHO05D010183 4.3e-40 167.5 84 100.0
TPR.G40481 Trifolium pratense HOM05D002965 ORTHO05D010183 5.6e-40 167.2 83 100.0
CsaV3_UNG209220 Cucumis sativus L. HOM05D002965 ORTHO05D010183 2.1e-39 165.2 82 100.0
arahy.Tifrunner.gnm1.ann1.CG3D8R Arachis hypogaea HOM05D002965 ORTHO05D010183 2.8e-39 164.9 84 98.8
arahy.Tifrunner.gnm1.ann1.EP7E6M Arachis hypogaea HOM05D002965 ORTHO05D010183 2.8e-39 164.9 84 98.8
arahy.Tifrunner.gnm1.ann1.I1QAK6 Arachis hypogaea HOM05D002965 ORTHO05D010183 2.8e-39 164.9 84 98.8
Sp3g25630 Schrenkiella parvula HOM05D002965 ORTHO05D010183 2.8e-39 164.9 83 98.8
CAN.G309.4 Capsicum annuum HOM05D002965 ORTHO05D010183 4.7e-39 164.1 83 98.8
Medtr5g040110 Medicago truncatula HOM05D002965 ORTHO05D010183 4.7e-39 164.1 83 98.8
Cpa.g.sc263.23 Carica papaya HOM05D002965 ORTHO05D010183 1.4e-38 162.5 83 97.6
Dinv06704 Davidia involucrata HOM05D002965 ORTHO05D010183 1.8e-38 162.2 84 97.6
Potri.007G061981 Populus trichocarpa HOM05D002965 ORTHO05D010183 1.8e-38 162.2 82 98.8
Hma1.2p1_1338F.1_g276549 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 2.3e-38 161.8 83 97.6
Hma1.2p1_1338F.1_g276560 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 2.3e-38 161.8 83 97.6
Actinidia10888 Actinidia chinensis HOM05D002965 ORTHO05D010183 3.0e-38 161.4 84 97.6
HanXRQChr08g0212281 Helianthus annuus HOM05D002965 ORTHO05D010183 4.0e-38 161.0 83 97.6
HanXRQMTg0579441 Helianthus annuus HOM05D002965 ORTHO05D010183 4.0e-38 161.0 83 97.6
LjContig00315g0010995 Lotus japonicus HOM05D002965 ORTHO05D010183 4.0e-38 161.0 80 100.0
QL05p039661 Quercus lobata HOM05D002965 ORTHO05D010183 6.8e-38 160.2 83 96.4
Lsat_1_v5_gn_4_66041 Lactuca sativa HOM05D002965 ORTHO05D010183 2.0e-37 158.7 83 96.4
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 3.4e-37 157.9 80 98.8
Sed0028066 Sechium edule HOM05D002965 ORTHO05D010183 4.4e-37 157.5 81 96.3
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 5.7e-37 157.1 78 100.0
Aqoxy1G02687 Aquilegia oxysepala HOM05D002965 ORTHO05D010183 7.5e-37 156.8 83 95.2
SalBow1G8555 Salvia bowleyana HOM05D002965 ORTHO05D010183 1.3e-36 156.0 83 95.2
unitig_87.g27935 Utricularia gibba HOM05D002965 ORTHO05D010183 9.2e-35 149.8 80 92.5
MELO3C031425.2 Cucumis melo HOM05D002965 ORTHO05D010183 2.7e-34 148.3 80 88.8
SHI48910 Sapria himalayana HOM05D002965 ORTHO05D010183 3.5e-34 147.9 78 93.6
CAN.G1439.3 Capsicum annuum HOM05D002965 ORTHO05D010183 1.0e-33 146.4 83 89.2
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 1.3e-33 146.0 78 94.9
Nitab4.5_0005613g0040 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.3e-33 146.0 79 92.4
Nitab4.5_0005831g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 2.5e-32 141.7 83 89.2
Hma1.2p1_0204F.1_g086870 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 4.3e-32 141.0 83 85.5
CAN.G1576.4 Capsicum annuum HOM05D002965 ORTHO05D010183 5.6e-32 140.6 83 88.0
BNapus_Darmor_BZH_scaffold_234p00020 Brassica napus HOM05D002965 ORTHO05D010183 5.8e-29 130.6 66 98.5
BolSC28t60382H Brassica oleracea HOM05D002965 ORTHO05D010183 5.8e-29 130.6 66 98.5
BolSC28t60415H Brassica oleracea HOM05D002965 ORTHO05D010183 5.8e-29 130.6 66 98.5
BraSC177t45752Z Brassica rapa HOM05D002965 ORTHO05D010183 5.8e-29 130.6 66 98.5
SGA_v2.0_scaffold479G52282 Striga asiatica HOM05D002965 ORTHO05D010183 5.8e-29 130.6 68 95.6
Nitab4.5_0000172g1470 Nicotiana tabacum HOM05D002965 ORTHO05D010183 9.8e-29 129.8 79 83.5
Hma1.2p1_0713F.1_g207720 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.7e-28 129.0 69 95.7
Solyc00g118690.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 9.2e-27 123.2 63 98.4
BraSC48t46251Z Brassica rapa HOM05D002965 ORTHO05D010183 4.6e-26 120.9 64 95.3
VMungo0647G1384 Vigna mungo HOM05D002965 ORTHO05D010183 1.1e-24 116.3 58 98.3
CAN.G1061.19 Capsicum annuum HOM05D002965 ORTHO05D010183 2.5e-24 115.2 58 98.3
CAN.G285.11 Capsicum annuum HOM05D002965 ORTHO05D010183 2.5e-24 115.2 58 98.3
Peaxi162Scf00197g00037 Petunia axillaris HOM05D002965 ORTHO05D010183 2.5e-24 115.2 81 76.5
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 2.5e-24 115.2 58 98.3
Lalb_Chr00c21g0405781 Lupinus albus HOM05D002965 ORTHO05D010183 3.3e-24 114.8 56 100.0
CAN.G390.19 Capsicum annuum HOM05D002965 ORTHO05D010183 9.5e-24 113.2 68 86.8
Nitab4.5_0001796g0410 Nicotiana tabacum HOM05D002965 ORTHO05D010183 2.8e-23 111.7 56 96.4
SabraMtG0001800 Salix brachista HOM05D001325 ORTHO05D001540 8.1e-23 110.2 59 93.2
CDE02G3239 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 2.3e-22 108.6 70 78.6
ECA039G0012 Erigeron canadensis HOM05D002965 ORTHO05D010183 8.9e-22 106.7 55 96.4
Cfa022987 Carpinus fangiana HOM05D002965 ORTHO05D010183 1.5e-21 105.9 53 98.1
Nitab4.5_0002558g0140 Nicotiana tabacum HOM05D002965 ORTHO05D010183 2.9e-20 101.7 60 85.0
ATMG01120 Arabidopsis thaliana HOM05D002965 ORTHO05D010183 1.1e-19 99.8 49 98.0
Nitab4.5_0001761g0080 Nicotiana tabacum HOM05D002965 ORTHO05D010183 2.3e-17 92.0 46 97.8
Hma1.2p1_0000F.1_g000060 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 3.9e-17 91.3 50 88.0
Psat6g191080 Pisum sativum HOM05D002965 ORTHO05D010183 4.3e-16 87.8 48 87.5
SMO053G0011 Selaginella moellendorffii HOM05D002965 ORTHO05D010183 7.6e-13 77.0 52 71.2
Sopen05g007970 Solanum pennellii HOM05D002965 ORTHO05D010183 6.4e-12 73.9 36 97.2
CSS0026545 Camellia sinensis var. sinensis HOM05D002965 ORTHO05D010183 2.4e-11 72.0 56 69.6
Mapoly0013s0013 Marchantia polymorpha HOM05D002965 ORTHO05D010183 3.2e-11 71.6 50 68.0
Dinv34203 Davidia involucrata HOM05D002965 ORTHO05D010183 9.2e-11 70.1 40 85.0
SHI41349 Sapria himalayana HOM05D037518 ORTHO05D010183 1.2e-10 69.7 36 91.7
CDE02G2102 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 2.1e-10 68.9 47 72.3
BolC7t41501H Brassica oleracea HOM05D002965 ORTHO05D010183 2.7e-10 68.6 36 88.9
QL02p008127 Quercus lobata HOM05D003783 ORTHO05D004568 5.6e-08 60.8 38 78.9
Solyc10g018950.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 5.6e-08 60.8 40 75.0
Nitab4.5_0002418g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.8e-06 55.8 28 92.9


User provided reference genes

Program Settings