Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 2.8e-111 405.2 191 100.0
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 2.8e-111 405.2 191 100.0
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 1.2e-106 389.8 191 96.9
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 1.7e-105 386.0 191 96.9
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 2.3e-105 385.6 191 96.3
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 5.0e-105 384.4 191 96.3
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 5.0e-105 384.4 191 96.3
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 5.0e-105 384.4 191 96.3
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 1.5e-104 382.9 189 96.8
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 1.9e-104 382.5 191 96.3
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 1.9e-104 382.5 191 96.3
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 1.9e-104 382.5 191 96.3
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 1.9e-104 382.5 191 96.3
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 1.9e-104 382.5 191 96.3
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 2.5e-104 382.1 191 95.8
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 4.3e-104 381.3 188 95.7
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 4.3e-104 381.3 191 95.8
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 4.3e-104 381.3 191 95.8
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 5.6e-104 380.9 191 95.8
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 1.6e-103 379.4 191 95.3
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 1.6e-103 379.4 191 95.8
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 1.6e-103 379.4 191 95.8
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 1.6e-103 379.4 191 95.8
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 2.8e-103 378.6 188 94.7
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 2.8e-103 378.6 191 95.3
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 2.8e-103 378.6 191 95.3
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.0e-102 376.7 184 97.3
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 3.1e-102 375.2 191 94.2
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 5.2e-102 374.4 191 94.8
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 5.8e-101 370.9 188 94.1
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 3.2e-99 365.2 191 92.1
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 5.4e-99 364.4 191 92.7
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 2.0e-98 362.5 179 96.1
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 2.5e-96 355.5 191 90.1
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 4.7e-95 351.3 170 98.2
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 5.2e-94 347.8 189 89.9
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 2.0e-93 345.9 188 87.2
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 4.4e-93 344.7 170 97.1
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 7.5e-93 344.0 170 97.1
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 9.8e-93 343.6 170 97.1
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 3.7e-92 341.7 186 88.2
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 3.7e-92 341.7 186 88.2
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 6.4e-92 340.9 170 95.3
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 8.3e-92 340.5 168 97.0
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 8.3e-92 340.5 170 95.9
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 1.1e-91 340.1 170 95.9
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 3.2e-91 338.6 167 97.0
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 5.4e-91 337.8 168 96.4
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 5.4e-91 337.8 170 95.9
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 1.2e-90 336.7 170 95.3
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 2.1e-90 335.9 170 95.3
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 2.1e-90 335.9 170 95.3
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 2.7e-90 335.5 166 96.4
Hma1.2p1_1099F.1_g256790 Hydrangea macrophylla HOM05D001560 ORTHO05D004675 4.7e-87 324.7 165 94.5
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-85 319.7 170 90.6
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 4.4e-85 318.2 177 87.6
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 8.4e-84 313.9 160 93.1
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 1.4e-83 313.2 185 82.7
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 7.1e-83 310.8 163 91.4
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 9.2e-83 310.5 170 89.4
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 4.6e-82 308.1 166 89.8
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 2.3e-81 305.8 191 81.2
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 5.1e-81 304.7 168 87.5
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 7.3e-80 300.8 190 77.9
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-79 299.7 179 82.1
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-78 297.0 177 81.4
SHI40934 Sapria himalayana HOM05D001560 ORTHO05D004675 3.1e-78 295.4 165 86.7
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 4.4e-77 291.6 164 86.0
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 7.6e-77 290.8 170 84.1
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 4.9e-76 288.1 153 91.5
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-75 286.2 169 84.0
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 2.4e-75 285.8 164 85.4
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 2.1e-74 282.7 141 96.5
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 2.1e-74 282.7 141 96.5
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 1.3e-73 280.0 146 93.2
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 6.6e-73 277.7 188 71.8
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 9.0e-70 267.3 135 94.8
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 2.6e-69 265.8 138 93.5
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 3.2e-67 258.8 135 91.9
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 2.3e-65 252.7 170 77.6
SHI52730 Sapria himalayana HOM05D001560 ORTHO05D004675 2.3e-65 252.7 142 85.9
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 3.0e-65 252.3 138 89.1
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 3.0e-65 252.3 138 89.1
SHI39080 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-64 249.6 155 80.6
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 3.3e-64 248.8 132 90.2
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 2.8e-63 245.7 148 81.8
SHI35188 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-62 243.4 131 88.5
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 6.9e-62 241.1 124 93.5
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 3.2e-59 232.3 136 84.6
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 2.1e-58 229.6 192 66.1
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 6.7e-57 224.6 192 65.6
BraSC177t45760Z Brassica rapa HOM05D001560 ORTHO05D004675 2.5e-56 222.6 136 82.4
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-55 219.9 138 81.9
SHI50434 Sapria himalayana HOM05D001560 ORTHO05D004675 2.1e-55 219.5 135 82.2
Sc13g0007750 Simmondsia chinensis HOM05D001560 ORTHO05D004675 3.7e-55 218.8 185 63.8
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 4.8e-55 218.4 127 84.3
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 6.9e-54 214.5 114 91.2
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 1.7e-52 209.9 100 98.0
SHI35332 Sapria himalayana HOM05D001560 ORTHO05D004675 1.7e-52 209.9 112 89.3
Nitab4.5_0001152g0360 Nicotiana tabacum HOM05D001560 ORTHO05D004675 3.8e-52 208.8 148 73.0
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 1.4e-51 206.8 99 98.0
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 3.2e-51 205.7 109 90.8
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 9.3e-51 204.1 97 97.9
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 1.2e-50 203.8 96 99.0
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 1.6e-50 203.4 99 97.0
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 1.3e-49 200.3 145 62.8
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 8.7e-49 197.6 103 91.3
Solyc08g065620.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 5.7e-48 194.9 102 91.2
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 7.4e-48 194.5 146 59.6
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-47 193.4 115 84.3
BraSC48t46227Z Brassica rapa HOM05D001560 ORTHO05D004675 3.7e-47 192.2 109 87.2
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 5.9e-45 184.9 100 88.0
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 2.2e-44 183.0 99 87.9
SHI54988 Sapria himalayana HOM05D001560 ORTHO05D004675 2.1e-42 176.4 96 87.5
Solyc03g061560.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 2.1e-42 176.4 102 84.3
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 3.6e-42 175.6 94 88.3
Solyc01g020470.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 6.1e-42 174.9 143 65.0
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 5.1e-41 171.8 79 98.7
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.5e-40 169.5 108 78.7
Os12g0422971 Oryza sativa ssp. japonica HOM05D001560 ORTHO05D004675 2.2e-39 166.4 89 89.9
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-38 164.1 87 86.2
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-38 164.1 87 86.2
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 1.0e-36 157.5 74 98.6
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 1.0e-36 157.5 74 98.6
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 1.7e-36 156.8 129 65.1
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 3.8e-36 155.6 172 51.2
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 5.0e-36 155.2 132 62.1
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 6.5e-36 154.8 74 97.3
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 6.5e-36 154.8 74 97.3
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 6.5e-36 154.8 74 97.3
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 6.5e-36 154.8 74 97.3
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 7.2e-35 151.4 74 93.2
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 2.7e-34 149.4 71 95.8
SMO053G0006 Selaginella moellendorffii HOM05D001560 ORTHO05D004675 1.4e-33 147.1 175 45.1
Solyc08g029250.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.4e-33 147.1 150 56.0
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 5.1e-33 145.2 72 93.1
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 8.8e-33 144.4 81 84.0
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 4.4e-32 142.1 74 89.2
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 9.7e-32 141.0 74 89.2
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-31 139.8 74 89.2
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 2.8e-31 139.4 74 87.8
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 3.7e-31 139.0 74 87.8
TPR.G20383 Trifolium pratense HOM05D001560 ORTHO05D004675 4.8e-31 138.7 86 77.9
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 8.2e-31 137.9 74 86.5
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-30 136.7 72 88.9
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 4.1e-30 135.6 70 90.0
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 5.3e-30 135.2 74 86.5
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-29 133.7 72 86.1
Manes.01G049510 Manihot esculenta HOM05D001560 ORTHO05D004675 2.6e-29 132.9 68 89.7
SHI49835 Sapria himalayana HOM05D001560 ORTHO05D004675 3.4e-29 132.5 135 57.8
SHI50380 Sapria himalayana HOM05D001560 ORTHO05D004675 3.4e-29 132.5 135 57.8
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-28 131.0 74 85.1
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-28 129.8 74 85.1
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 5.0e-28 128.6 71 85.9
TPR.G15690 Trifolium pratense HOM05D001560 ORTHO05D004675 1.9e-27 126.7 64 95.3
SHI38099 Sapria himalayana HOM05D001560 ORTHO05D004675 3.2e-27 125.9 74 82.4
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 7.4e-24 114.8 64 84.4
C01p34850 Brassica napus HOM05D001560 ORTHO05D004675 2.8e-23 112.8 57 93.0
PGSC0003DMG400020882 Solanum tuberosum HOM05D001560 ORTHO05D004675 6.3e-23 111.7 69 79.7
Prupe.2G039100 Prunus persica HOM05D001560 ORTHO05D004675 1.3e-20 104.0 61 86.9
SHI33106 Sapria himalayana HOM05D000743 ORTHO05D000580 2.9e-20 102.8 59 88.1
CsaV3_5G015880 Cucumis sativus L. HOM05D001560 ORTHO05D004675 2.5e-19 99.8 72 69.4
BraSC48t46315Z Brassica rapa HOM05D001560 ORTHO05D004675 5.5e-19 98.6 51 92.2
SHI44216 Sapria himalayana HOM05D001560 ORTHO05D004675 3.0e-17 92.8 69 68.1
SHI35323 Sapria himalayana HOM05D001560 ORTHO05D004675 5.2e-17 92.0 58 77.6
Nitab4.5_0019346g0010 Nicotiana tabacum HOM05D001560 ORTHO05D004675 9.7e-16 87.8 44 93.2
SHI36269 Sapria himalayana HOM05D001560 ORTHO05D004675 2.8e-15 86.3 111 47.7
Nitab4.5_0001152g0580 Nicotiana tabacum HOM05D001560 ORTHO05D004675 3.5e-13 79.3 45 80.0
SHI38481 Sapria himalayana HOM05D001560 ORTHO05D004675 8.5e-12 74.7 181 33.7
SHI33107 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-11 73.9 50 72.0
EL10Ac7g17432 Beta vulgaris HOM05D001560 ORTHO05D004675 2.3e-09 66.6 35 85.7
Nitab4.5_0003709g0080 Nicotiana tabacum HOM05D012582 ORTHO05D011721 5.7e-08 62.0 30 93.3
DCAR_022732 Daucus carota HOM05D001560 ORTHO05D004675 9.8e-08 61.2 30 90.0
SHI35288 Sapria himalayana HOM05D001560 ORTHO05D004675 9.8e-08 61.2 34 82.4
SHI36570 Sapria himalayana HOM05D001560 ORTHO05D004675 3.1e-06 56.2 33 81.8
Medtr8g059730 Medicago truncatula HOM05D001560 ORTHO05D004675 7.0e-06 55.1 43 58.1


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