Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_MTg0498181 Rosa chinensis HOM05D008466 ORTHO05D010817 1.2e-29 132.5 67 100.0
Potri.007G062442 Populus trichocarpa HOM05D008466 ORTHO05D010817 1.6e-29 132.1 66 100.0
Lalb_Chr00c21g0406001 Lupinus albus HOM05D008466 ORTHO05D010817 2.7e-29 131.3 67 98.5
Lalb_Chr00c39g0409011 Lupinus albus HOM05D008466 ORTHO05D010817 2.7e-29 131.3 67 98.5
Lalb_Chr00c39g0409191 Lupinus albus HOM05D008466 ORTHO05D010817 2.7e-29 131.3 67 98.5
Lalb_Chr18g0049571 Lupinus albus HOM05D008466 ORTHO05D010817 2.7e-29 131.3 67 98.5
Nitab4.5_0014136g0010 Nicotiana tabacum HOM05D008466 ORTHO05D010817 7.8e-29 129.8 66 98.5
LjContig00315g0013151 Lotus japonicus HOM05D008466 ORTHO05D010817 2.3e-28 128.3 67 97.0
TPR.G7441 Trifolium pratense HOM05D008466 ORTHO05D010817 2.3e-28 128.3 67 97.0
Nitab4.5_0010033g0120 Nicotiana tabacum HOM05D008466 ORTHO05D010817 6.6e-28 126.7 66 95.5
CiPaw.11G081100 Carya illinoinensis HOM05D008466 ORTHO05D010817 1.1e-27 125.9 65 96.9
Medtr8g059750 Medicago truncatula HOM05D008466 ORTHO05D010817 1.9e-27 125.2 67 95.5
Nitab4.5_0000172g1700 Nicotiana tabacum HOM05D008466 ORTHO05D010817 1.9e-27 125.2 66 93.9
A04p09550 Brassica napus HOM05D008466 ORTHO05D010817 3.3e-27 124.4 66 95.5
BolSC28t60321H Brassica oleracea HOM05D008466 ORTHO05D010817 3.3e-27 124.4 66 95.5
BraSC48t46287Z Brassica rapa HOM05D008466 ORTHO05D010817 3.3e-27 124.4 66 95.5
BraSC48t46336Z Brassica rapa HOM05D008466 ORTHO05D010817 3.3e-27 124.4 66 95.5
Nitab4.5_0001952g0260 Nicotiana tabacum HOM05D008466 ORTHO05D010817 1.6e-26 122.1 66 92.4
Nitab4.5_0000580g0160 Nicotiana tabacum HOM05D008466 ORTHO05D010817 4.0e-25 117.5 66 89.4
Zm00001eb187490 Zea mays HOM05D008466 ORTHO05D010817 6.9e-25 116.7 65 92.3
Zm00001eb436220 Zea mays HOM05D008466 ORTHO05D010817 6.9e-25 116.7 65 92.3
Zm00001eb436270 Zea mays HOM05D008466 ORTHO05D010817 6.9e-25 116.7 65 92.3
Zm00001eb436350 Zea mays HOM05D008466 ORTHO05D010817 6.9e-25 116.7 65 92.3
Zm00001eb436460 Zea mays HOM05D008466 ORTHO05D010817 6.9e-25 116.7 65 92.3
Zm00001eb436500 Zea mays HOM05D008466 ORTHO05D010817 6.9e-25 116.7 65 92.3
arahy.Tifrunner.gnm1.ann1.GWEJ34 Arachis hypogaea HOM05D008466 ORTHO05D010817 2.9e-23 111.3 58 96.6
VMungo0565G0006 Vigna mungo HOM05D008466 ORTHO05D010817 4.9e-23 110.5 58 96.6
Glyma.01G136900 Glycine max HOM05D008466 ORTHO05D010817 1.9e-22 108.6 65 84.6
ATMG00285 Arabidopsis thaliana HOM05D008466 ORTHO05D010817 5.4e-22 107.1 57 96.5
SEGI_14764 Sequoiadendron giganteum HOM05D008466 ORTHO05D010817 7.1e-22 106.7 66 83.3
Peaxi162Scf00651g00634 Petunia axillaris HOM05D008466 ORTHO05D010817 2.1e-21 105.1 51 100.0
SalBow1G0863 Salvia bowleyana HOM05D008466 ORTHO05D010817 7.9e-21 103.2 58 91.4
Mapoly0157s0028 Marchantia polymorpha HOM05D008466 ORTHO05D010817 1.6e-18 95.5 58 86.2
CDE02G0407 Ceratophyllum demersum HOM05D008466 ORTHO05D010817 2.8e-18 94.7 48 100.0
arahy.Tifrunner.gnm1.ann1.48KRUQ Arachis hypogaea HOM05D008466 ORTHO05D010817 3.1e-17 91.3 47 97.9
Medtr2g040780 Medicago truncatula HOM05D008466 ORTHO05D010817 3.1e-17 91.3 47 97.9
Nitab4.5_0002325g0090 Nicotiana tabacum HOM05D008466 ORTHO05D010817 3.4e-16 87.8 54 85.2
Nitab4.5_0000031g0180 Nicotiana tabacum HOM05D008466 ORTHO05D011423 8.7e-12 73.2 63 63.5
Haze_26858 Corylus avellana HOM05D000729 ORTHO05D001063 4.0e-09 64.3 58 56.9
BolSC28t60423H Brassica oleracea HOM05D008466 ORTHO05D010817 2.6e-08 61.6 36 86.1
Gorai.001G167700 Gossypium raimondii HOM05D008466 ORTHO05D010817 1.1e-06 56.2 44 65.9


User provided reference genes

Program Settings