Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0242971 Rosa chinensis HOM05D000097 ORTHO05D009232 2.6e-91 338.6 156 100.0
RcHm_v2.0_Chr7g0243171 Rosa chinensis HOM05D012044 ORTHO05D009232 4.5e-19 98.6 56 83.9
RcHm_v2.0_Chr7g0243041 Rosa chinensis HOM05D012044 ORTHO05D009232 1.0e-18 97.4 55 83.6
FvH4_5g37090 Fragaria vesca HOM05D000097 ORTHO05D009232 9.1e-12 74.3 65 61.5
FAN08G0420 Fragaria x ananassa HOM05D000097 ORTHO05D009232 1.0e-10 70.9 61 62.3
FvH4_5g36330 Fragaria vesca HOM05D000097 ORTHO05D000041 1.3e-10 70.5 54 63.0
FAN08G2061 Fragaria x ananassa HOM05D000097 ORTHO05D009232 2.2e-10 69.7 64 50.0
Prupe.2G080300 Prunus persica HOM05D000097 ORTHO05D000041 2.7e-08 62.8 60 51.7
Prupe.2G033900 Prunus persica HOM05D000097 ORTHO05D000041 6.1e-08 61.6 60 55.0
MD09G1088100 Malus domestica HOM05D000097 ORTHO05D000041 1.4e-07 60.5 59 55.9
RcHm_v2.0_Chr7g0214651 Rosa chinensis HOM05D000097 ORTHO05D009232 1.8e-07 60.1 59 50.8
RcHm_v2.0_Chr7g0230661 Rosa chinensis HOM05D000097 ORTHO05D000041 1.8e-07 60.1 60 48.3
MD17G1077100 Malus domestica HOM05D000097 ORTHO05D000041 5.2e-07 58.5 59 55.9
FvH4_1g02950 Fragaria vesca HOM05D000097 ORTHO05D000041 8.8e-07 57.8 59 49.2
FAN13G1601 Fragaria x ananassa HOM05D000097 ORTHO05D000041 8.8e-07 57.8 59 49.2
Prupe.2G080900 Prunus persica HOM05D000097 ORTHO05D000041 1.2e-06 57.4 63 47.6
Prupe.2G081100 Prunus persica HOM05D000097 ORTHO05D000041 1.2e-06 57.4 63 47.6
FAN28G0864 Fragaria x ananassa HOM05D000097 ORTHO05D000041 2.0e-06 56.6 59 47.5
MD17G1078100 Malus domestica HOM05D000097 ORTHO05D000041 2.0e-06 56.6 59 54.2
MD09G1088000 Malus domestica HOM05D000097 ORTHO05D000041 2.6e-06 56.2 59 54.2
MD17G1077800 Malus domestica HOM05D000097 ORTHO05D000041 7.5e-06 54.7 52 55.8
MD00G1011500 Malus domestica HOM05D000097 ORTHO05D000041 9.7e-06 54.3 52 48.1
MD17G1028400 Malus domestica HOM05D000097 ORTHO05D000041 9.7e-06 54.3 63 42.9


User provided reference genes

Program Settings