Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0242251 Rosa chinensis HOM05D006997 ORTHO05D008713 1.4e-43 179.1 84 100.0
RcHm_v2.0_Chr3g0492071 Rosa chinensis HOM05D006997 ORTHO05D008713 2.7e-42 174.9 83 97.6
Haze_18264 Corylus avellana HOM05D006997 ORTHO05D008713 7.8e-42 173.3 83 95.2
DCAR_012882 Daucus carota HOM05D006997 ORTHO05D008713 1.0e-41 172.9 83 94.0
VMungo1309G1562 Vigna mungo HOM05D006997 ORTHO05D008713 1.0e-41 172.9 83 96.4
Potri.002G100700 Populus trichocarpa HOM05D006997 ORTHO05D008713 1.7e-41 172.2 83 94.0
CiPaw.15G045900 Carya illinoinensis HOM05D006997 ORTHO05D008713 2.3e-41 171.8 83 94.0
Phvul.009G033100 Phaseolus vulgaris HOM05D006997 ORTHO05D008713 2.3e-41 171.8 83 95.2
FvH4_5g36560 Fragaria vesca HOM05D006997 ORTHO05D008713 3.8e-41 171.0 83 95.2
FAN08G2563 Fragaria x ananassa HOM05D006997 ORTHO05D008713 3.8e-41 171.0 83 95.2
FAN18G0565 Fragaria x ananassa HOM05D006997 ORTHO05D008713 3.8e-41 171.0 83 95.2
Prupe.1G523100 Prunus persica HOM05D006997 ORTHO05D008713 3.8e-41 171.0 83 94.0
Actinidia10345 Actinidia chinensis HOM05D006997 ORTHO05D008713 5.0e-41 170.6 83 92.8
arahy.Tifrunner.gnm1.ann1.2V06JV Arachis hypogaea HOM05D006997 ORTHO05D008713 5.0e-41 170.6 83 94.0
arahy.Tifrunner.gnm1.ann1.50RG73 Arachis hypogaea HOM05D006997 ORTHO05D008713 5.0e-41 170.6 83 94.0
arahy.Tifrunner.gnm1.ann1.M6BDRX Arachis hypogaea HOM05D006997 ORTHO05D008713 5.0e-41 170.6 83 94.0
CSS0033006 Camellia sinensis var. sinensis HOM05D006997 ORTHO05D008713 5.0e-41 170.6 83 94.0
CSS0036565 Camellia sinensis var. sinensis HOM05D006997 ORTHO05D008713 5.0e-41 170.6 83 94.0
FAN13G2131 Fragaria x ananassa HOM05D006997 ORTHO05D008713 5.0e-41 170.6 83 94.0
Nn5g29994 Nelumbo nucifera HOM05D006997 ORTHO05D008713 5.0e-41 170.6 83 94.0
MD15G1376400 Malus domestica HOM05D006997 ORTHO05D008713 6.6e-41 170.2 83 94.0
Glyma.04G099000 Glycine max HOM05D006997 ORTHO05D008713 8.6e-41 169.9 83 92.8
Gohir.A01G132700 Gossypium hirsutum HOM05D006997 ORTHO05D008713 8.6e-41 169.9 83 94.0
Gohir.D01G115600 Gossypium hirsutum HOM05D006997 ORTHO05D008713 1.1e-40 169.5 83 94.0
Gorai.002G141200 Gossypium raimondii HOM05D006997 ORTHO05D008713 1.1e-40 169.5 83 94.0
MBI02_g10710_MAGBIO Magnolia biondii HOM05D006997 ORTHO05D008713 1.1e-40 169.5 83 91.6
GSVIVG01009084001 Vitis vinifera HOM05D006997 ORTHO05D008713 1.1e-40 169.5 83 92.8
Nitab4.5_0000786g0050 Nicotiana tabacum HOM05D006997 ORTHO05D008713 1.5e-40 169.1 83 91.6
Nitab4.5_0005108g0030 Nicotiana tabacum HOM05D006997 ORTHO05D008713 1.5e-40 169.1 83 92.8
Actinidia30795 Actinidia chinensis HOM05D006997 ORTHO05D008713 1.9e-40 168.7 83 90.4
ClCG11G014320 Citrullus lanatus HOM05D006997 ORTHO05D008713 1.9e-40 168.7 83 92.8
Cc10_g06680 Coffea canephora HOM05D006997 ORTHO05D008713 1.9e-40 168.7 83 92.8
MELO3C003553.2 Cucumis melo HOM05D006997 ORTHO05D008713 1.9e-40 168.7 83 92.8
Lj4C96G9 Lonicera japonica HOM05D006997 ORTHO05D008713 1.9e-40 168.7 83 91.6
MD08G1188600 Malus domestica HOM05D006997 ORTHO05D008713 1.9e-40 168.7 83 92.8
COL.COLO4_12006 Corchorus olitorius HOM05D006997 ORTHO05D008713 2.5e-40 168.3 83 92.8
Thecc.08G101800 Theobroma cacao HOM05D006997 ORTHO05D008713 2.5e-40 168.3 83 92.8
Cpa.g.sc36.182 Carica papaya HOM05D006997 ORTHO05D008713 3.3e-40 167.9 83 91.6
Lj1g0014637 Lotus japonicus HOM05D006997 ORTHO05D008713 3.3e-40 167.9 83 90.4
Peaxi162Scf00030g02415 Petunia axillaris HOM05D006997 ORTHO05D008713 3.3e-40 167.9 83 91.6
Glyma.06G100700 Glycine max HOM05D006997 ORTHO05D008713 4.3e-40 167.5 83 91.6
PGSC0003DMG400030838 Solanum tuberosum HOM05D006997 ORTHO05D008713 4.3e-40 167.5 83 91.6
CsaV3_3G047700 Cucumis sativus L. HOM05D006997 ORTHO05D008713 5.6e-40 167.2 83 91.6
Hund26989 Selenicereus undatus HOM05D006997 ORTHO05D008713 5.6e-40 167.2 83 92.8
Atru.chr13.1117 Acer truncatum HOM05D006997 ORTHO05D008713 7.3e-40 166.8 83 90.4
Ciclev10001423m.g Citrus clementina HOM05D006997 ORTHO05D008713 7.3e-40 166.8 83 91.6
Rhsim06G0078000 Rhododendron simsii HOM05D006997 ORTHO05D008713 7.3e-40 166.8 83 89.2
SalBow1G8133 Salvia bowleyana HOM05D006997 ORTHO05D008713 7.3e-40 166.8 83 89.2
Sed0013982 Sechium edule HOM05D006997 ORTHO05D008713 7.3e-40 166.8 83 90.4
Solyc04g074710.3 Solanum lycopersicum HOM05D006997 ORTHO05D008713 7.3e-40 166.8 83 90.4
Manes.02G149000 Manihot esculenta HOM05D006997 ORTHO05D008713 9.5e-40 166.4 83 90.4
QL02p002364 Quercus lobata HOM05D006997 ORTHO05D008713 9.5e-40 166.4 83 90.4
Sopen04g029680 Solanum pennellii HOM05D006997 ORTHO05D008713 9.5e-40 166.4 83 90.4
PGR042G3947 Punica granatum HOM05D006997 ORTHO05D008713 1.2e-39 166.0 83 89.2
TPR.G18644 Trifolium pratense HOM05D006997 ORTHO05D008713 1.2e-39 166.0 83 90.4
TWI56G0051 Tripterygium wilfordii HOM05D006997 ORTHO05D008713 1.2e-39 166.0 83 91.6
CAN.G857.15 Capsicum annuum HOM05D006997 ORTHO05D008713 1.6e-39 165.6 83 90.4
Medtr5g099370 Medicago truncatula HOM05D006997 ORTHO05D008713 2.1e-39 165.2 83 90.4
Psat2g000280 Pisum sativum HOM05D006997 ORTHO05D008713 2.1e-39 165.2 83 90.4
vmacro21291 Vaccinium macrocarpon HOM05D006997 ORTHO05D008713 2.1e-39 165.2 83 89.2
ECA247G1028 Erigeron canadensis HOM05D006997 ORTHO05D008713 2.8e-39 164.9 83 89.2
CANSAT54G2489 Cannabis sativa HOM05D006997 ORTHO05D008713 3.6e-39 164.5 83 91.6
Duzib093G0368 Durio zibethinus HOM05D006997 ORTHO05D008713 4.7e-39 164.1 83 90.4
HanXRQChr02g0039281 Helianthus annuus HOM05D006997 ORTHO05D008713 6.1e-39 163.7 83 88.0
Lsat_1_v5_gn_1_3100 Lactuca sativa HOM05D006997 ORTHO05D008713 6.1e-39 163.7 83 89.2
Eucgr.F00379 Eucalyptus grandis HOM05D006997 ORTHO05D008713 8.0e-39 163.3 83 89.2
ATR0684G208 Amborella trichopoda HOM05D006997 ORTHO05D008713 1.4e-38 162.5 83 89.2
SGA_v2.0_scaffold28G11904 Striga asiatica HOM05D006997 ORTHO05D008713 1.8e-38 162.2 83 88.0
Duzib116G0677 Durio zibethinus HOM05D006997 ORTHO05D008713 3.0e-38 161.4 83 88.0
TAR381G0945 Trochodendron aralioides HOM05D006997 ORTHO05D008713 3.0e-38 161.4 83 86.7
Migut.N02878 Erythranthe guttata HOM05D006997 ORTHO05D008713 6.8e-38 160.2 83 88.0
Migut.O00787 Erythranthe guttata HOM05D006997 ORTHO05D008713 6.8e-38 160.2 83 88.0
arahy.Tifrunner.gnm1.ann1.I4BPU4 Arachis hypogaea HOM05D006997 ORTHO05D008713 8.9e-38 159.8 82 89.0
HPP92_005985 Vanilla planifolia HOM05D006997 ORTHO05D008713 1.2e-37 159.5 83 90.4
Hma1.2p1_1613F.1_g293656 Hydrangea macrophylla HOM05D006997 ORTHO05D008713 1.5e-37 159.1 83 85.5
Lalb_Chr08g0242211 Lupinus albus HOM05D006997 ORTHO05D008713 1.5e-37 159.1 83 86.7
PSO170G4713 Papaver somniferum HOM05D006997 ORTHO05D008713 1.5e-37 159.1 83 86.7
PSO700G0253 Papaver somniferum HOM05D006997 ORTHO05D008713 1.5e-37 159.1 83 86.7
arahy.Tifrunner.gnm1.ann1.I3UG1J Arachis hypogaea HOM05D006997 ORTHO05D008713 3.4e-37 157.9 83 86.7
SMO203G0247 Selaginella moellendorffii HOM05D006997 ORTHO05D008713 1.3e-36 156.0 83 85.5
PSO447G0258 Papaver somniferum HOM05D006997 ORTHO05D008713 2.9e-36 154.8 83 84.3
THA.LOC104806793 Tarenaya hassleriana HOM05D006997 ORTHO05D008713 3.2e-35 151.4 83 83.1
AagrBONN_evm.TU.Sc2ySwM_228.3329 Anthoceros agrestis HOM05D006997 ORTHO05D008713 1.2e-34 149.4 83 80.7
Mapoly0028s0040 Marchantia polymorpha HOM05D006997 ORTHO05D008713 8.6e-33 143.3 83 75.9
Pp3c2_7910 Physcomitrium patens HOM05D006997 ORTHO05D008713 8.6e-33 143.3 83 75.9
arahy.Tifrunner.gnm1.ann1.U0EC22 Arachis hypogaea HOM05D006997 ORTHO05D008713 2.1e-31 138.7 71 88.7
Cre12.g558400 Chlamydomonas reinhardtii HOM05D006997 ORTHO05D008713 1.5e-29 132.5 78 75.6
CDE10G0812 Ceratophyllum demersum HOM05D006997 ORTHO05D008713 5.8e-29 130.6 65 87.7
Aqoxy5G01920 Aquilegia oxysepala HOM05D006997 ORTHO05D008713 3.7e-28 127.9 64 90.6
arahy.Tifrunner.gnm1.ann1.G6707F Arachis hypogaea HOM05D006997 ORTHO05D008713 6.4e-28 127.1 70 84.3
Ca_20316_v3 Cicer arietinum L. HOM05D006997 ORTHO05D008713 7.0e-27 123.6 64 85.9
PRCOL_00000168 Prasinoderma coloniale HOM05D006997 ORTHO05D008713 9.2e-27 123.2 83 63.9
Aqoxy605s001 Aquilegia oxysepala HOM05D006997 ORTHO05D008713 1.2e-26 122.9 62 90.3
arahy.Tifrunner.gnm1.ann1.L1DSY1 Arachis hypogaea HOM05D006997 ORTHO05D008713 2.7e-26 121.7 65 86.2
Phvul.001G070300 Phaseolus vulgaris HOM05D006997 ORTHO05D008713 4.6e-26 120.9 61 88.5
CBR_g19661 Chara braunii HOM05D006997 ORTHO05D008713 3.0e-25 118.2 72 77.8
MCO01G675 Micromonas commoda HOM05D006997 ORTHO05D008713 8.1e-23 110.2 69 71.0
SEGI_19393 Sequoiadendron giganteum HOM05D006997 ORTHO05D008713 1.1e-14 83.2 38 97.4
CDE10G0159 Ceratophyllum demersum HOM05D006997 ORTHO05D008713 4.0e-14 81.3 37 97.3
SHI35102 Sapria himalayana HOM05D006997 ORTHO05D008713 3.4e-13 78.2 37 91.9
SEGI_15027 Sequoiadendron giganteum HOM05D006997 ORTHO05D008713 1.3e-09 66.2 36 77.8
AUR62018973 Chenopodium quinoa HOM05D006997 ORTHO05D008713 8.7e-09 63.5 33 81.8


User provided reference genes

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