Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0239621 Rosa chinensis HOM05D009149 ORTHO05D343652 4.8e-83 311.2 170 100.0
RcHm_v2.0_Chr4g0410311 Rosa chinensis HOM05D009149 ORTHO05D346462 8.2e-75 283.9 169 91.7
RcHm_v2.0_Chr7g0194611 Rosa chinensis HOM05D009149 ORTHO05D003639 1.2e-68 263.5 165 88.5
RcHm_v2.0_Chr3g0456181 Rosa chinensis HOM05D009149 ORTHO05D343218 1.7e-51 206.5 127 87.4
RcHm_v2.0_Chr1g0333001 Rosa chinensis HOM05D009149 ORTHO05D348537 6.6e-48 194.5 121 90.1
RcHm_v2.0_Chr6g0291271 Rosa chinensis HOM05D009149 ORTHO05D003639 3.2e-34 149.1 161 59.0
RcHm_v2.0_Chr6g0250961 Rosa chinensis HOM05D009149 ORTHO05D341017 4.1e-34 148.7 91 87.9
RcHm_v2.0_Chr2g0131351 Rosa chinensis HOM05D009149 ORTHO05D003639 4.6e-33 145.2 160 58.1
RcHm_v2.0_Chr1g0335991 Rosa chinensis HOM05D009149 ORTHO05D003639 1.3e-32 143.7 160 57.5
RcHm_v2.0_Chr1g0350201 Rosa chinensis HOM05D009149 ORTHO05D003639 3.0e-32 142.5 151 59.6
RcHm_v2.0_Chr3g0496201 Rosa chinensis HOM05D009149 ORTHO05D345317 3.3e-31 139.0 103 77.7
RcHm_v2.0_Chr3g0493631 Rosa chinensis HOM05D009149 ORTHO05D003639 2.5e-23 112.8 113 61.1
RcHm_v2.0_Chr2g0105531 Rosa chinensis HOM05D009149 ORTHO05D003639 1.4e-21 107.1 120 57.5
RcHm_v2.0_Chr7g0225431 Rosa chinensis HOM05D009149 ORTHO05D346959 1.2e-20 104.0 118 56.8
RcHm_v2.0_Chr2g0131661 Rosa chinensis HOM05D009149 ORTHO05D003639 7.8e-17 91.3 54 90.7
RcHm_v2.0_Chr5g0053911 Rosa chinensis HOM05D009149 ORTHO05D342424 4.3e-07 58.9 46 67.4


User provided reference genes

Program Settings