Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0239391 Rosa chinensis HOM05D001711 ORTHO05D002211 5.8e-130 467.6 246 100.0
FAN18G3682 Fragaria x ananassa HOM05D001711 ORTHO05D002211 2.4e-107 392.5 253 85.8
FAN13G1847 Fragaria x ananassa HOM05D001711 ORTHO05D002211 2.6e-106 389.0 251 85.3
FAN08G3322 Fragaria x ananassa HOM05D001711 ORTHO05D002211 4.6e-103 378.3 253 83.8
FAN04G2057 Fragaria x ananassa HOM05D001711 ORTHO05D002211 8.5e-97 357.5 257 79.4
FvH4_5g37690 Fragaria vesca HOM05D001711 ORTHO05D002211 2.6e-77 292.7 250 68.0
MD08G1181100 Malus domestica HOM05D001711 ORTHO05D002211 3.9e-33 146.0 271 46.9
MD15G1366700 Malus domestica HOM05D001711 ORTHO05D002211 7.8e-26 121.7 265 43.8
Prupe.1G514600 Prunus persica HOM05D001711 ORTHO05D002211 1.7e-25 120.6 274 40.1
Thecc.08G108900 Theobroma cacao HOM05D001711 ORTHO05D002211 6.4e-20 102.1 301 38.5
COL.COLO4_16423 Corchorus olitorius HOM05D001711 ORTHO05D002211 1.4e-19 100.9 297 34.3
Duzib041G0392 Durio zibethinus HOM05D001711 ORTHO05D002211 7.1e-19 98.6 296 35.1
Gohir.A06G036500 Gossypium hirsutum HOM05D001711 ORTHO05D002211 2.1e-18 97.1 256 38.7
Gohir.D06G037300 Gossypium hirsutum HOM05D001711 ORTHO05D002211 2.1e-18 97.1 256 38.7
Gorai.010G042200 Gossypium raimondii HOM05D001711 ORTHO05D002211 2.1e-18 97.1 256 38.7
Duzib093G1498 Durio zibethinus HOM05D001711 ORTHO05D002211 2.7e-18 96.7 287 36.9
Cpa.g.sc36.121 Carica papaya HOM05D001711 ORTHO05D002211 3.5e-18 96.3 317 35.0
Duzib116G0637 Durio zibethinus HOM05D001711 ORTHO05D002211 3.5e-18 96.3 305 37.0
Gohir.A01G127900 Gossypium hirsutum HOM05D001711 ORTHO05D002211 6.0e-18 95.5 293 34.8
Lalb_Chr17g0344161 Lupinus albus HOM05D001711 ORTHO05D002211 2.3e-17 93.6 270 35.6
Gorai.002G139900 Gossypium raimondii HOM05D001711 ORTHO05D002211 3.9e-17 92.8 293 34.1
CiPaw.07G181000 Carya illinoinensis HOM05D001711 ORTHO05D002211 1.1e-16 91.3 267 35.6
Gohir.D01G114600 Gossypium hirsutum HOM05D001711 ORTHO05D002211 1.9e-16 90.5 293 34.1
CiPaw.08G044200 Carya illinoinensis HOM05D001711 ORTHO05D002211 4.3e-16 89.4 267 37.1
Sabra02G0074900 Salix brachista HOM05D001711 ORTHO05D002211 1.6e-15 87.4 273 35.2
Gohir.A05G227701 Gossypium hirsutum HOM05D001711 ORTHO05D002211 1.8e-14 84.0 264 35.6
Potri.002G094900 Populus trichocarpa HOM05D001711 ORTHO05D002211 2.4e-14 83.6 272 37.1
Thecc.01G103300 Theobroma cacao HOM05D001711 ORTHO05D002211 9.0e-14 81.6 290 30.0
Dinv44762 Davidia involucrata HOM05D001711 ORTHO05D002211 2.6e-13 80.1 266 36.5
Manes.18G068450 Manihot esculenta HOM05D001711 ORTHO05D002211 7.6e-13 78.6 292 33.6
CiPaw.03G140800 Carya illinoinensis HOM05D001711 ORTHO05D002211 1.3e-12 77.8 281 29.5
Actinidia10315 Actinidia chinensis HOM05D001711 ORTHO05D002211 1.7e-12 77.4 258 31.4
TAR625G1352 Trochodendron aralioides HOM05D001711 ORTHO05D002211 4.9e-12 75.9 264 34.1
Haze_22252 Corylus avellana HOM05D001711 ORTHO05D002211 1.4e-11 74.3 194 40.7
Glyma.14G172200 Glycine max HOM05D001711 ORTHO05D002211 1.4e-11 74.3 285 32.6
Sabra05G0125200 Salix brachista HOM05D001711 ORTHO05D002211 1.9e-11 73.9 288 33.3
Manes.02G153400 Manihot esculenta HOM05D001711 ORTHO05D002211 3.2e-11 73.2 288 32.6
Phvul.008G172700 Phaseolus vulgaris HOM05D001711 ORTHO05D002211 3.2e-11 73.2 278 32.0
Hma1.2p1_0237F.1_g099350 Hydrangea macrophylla HOM05D001711 ORTHO05D002211 4.2e-11 72.8 264 31.4
TAR628G0933 Trochodendron aralioides HOM05D001711 ORTHO05D002211 4.2e-11 72.8 276 34.4
Actinidia30765 Actinidia chinensis HOM05D001711 ORTHO05D002211 7.1e-11 72.0 208 34.1
Rhsim06G0083300 Rhododendron simsii HOM05D001711 ORTHO05D002211 7.1e-11 72.0 279 31.9
Gorai.009G238300 Gossypium raimondii HOM05D001711 ORTHO05D002211 9.3e-11 71.6 265 32.8
QL12p036488 Quercus lobata HOM05D001711 ORTHO05D002211 1.2e-10 71.2 201 35.3
Cpa.g.sc568.1 Carica papaya HOM05D001711 ORTHO05D002211 1.6e-10 70.9 304 28.9
Cc10_g07360 Coffea canephora HOM05D001711 ORTHO05D002211 1.6e-10 70.9 278 29.9
Oeu024536.1 Olea europaea HOM05D001711 ORTHO05D002211 1.6e-10 70.9 121 47.9
Manes.13G093500 Manihot esculenta HOM05D001711 ORTHO05D002211 3.5e-10 69.7 289 27.0
Peaxi162Scf00041g10112 Petunia axillaris HOM05D001711 ORTHO05D002211 4.6e-10 69.3 293 30.4
CiPaw.04G098500 Carya illinoinensis HOM05D001711 ORTHO05D002211 6.0e-10 68.9 290 32.8
VMungo0647G0712 Vigna mungo HOM05D001711 ORTHO05D002211 6.0e-10 68.9 279 32.6
Gohir.A11G200700 Gossypium hirsutum HOM05D001711 ORTHO05D002211 1.3e-09 67.8 270 29.6
Gohir.D05G230150 Gossypium hirsutum HOM05D001711 ORTHO05D002211 2.3e-09 67.0 177 38.4
Gorai.011G113000 Gossypium raimondii HOM05D001711 ORTHO05D002211 2.3e-09 67.0 269 30.1
Manes.12G136100 Manihot esculenta HOM05D001711 ORTHO05D002211 2.3e-09 67.0 288 28.5
TWI56G0363 Tripterygium wilfordii HOM05D001711 ORTHO05D002211 3.0e-09 66.6 64 62.5
Gorai.008G104800 Gossypium raimondii HOM05D001711 ORTHO05D002211 3.9e-09 66.2 274 31.0
Potri.005G166100 Populus trichocarpa HOM05D001711 ORTHO05D002211 3.9e-09 66.2 274 29.9
Solyc04g073950.2 Solanum lycopersicum HOM05D001711 ORTHO05D002211 3.9e-09 66.2 300 30.3
Medtr5g063310 Medicago truncatula HOM05D001711 ORTHO05D002211 5.1e-09 65.9 274 30.7
Gohir.D11G222400 Gossypium hirsutum HOM05D001711 ORTHO05D002211 8.7e-09 65.1 270 29.6
Duzib264G0635 Durio zibethinus HOM05D001711 ORTHO05D002211 1.1e-08 64.7 295 27.1
PSO541G5177 Papaver somniferum HOM05D001711 ORTHO05D002211 1.9e-08 63.9 277 30.3
Gohir.D12G096700 Gossypium hirsutum HOM05D001711 ORTHO05D002211 3.3e-08 63.2 274 31.8
Nn1g05328 Nelumbo nucifera HOM05D001711 ORTHO05D002211 3.3e-08 63.2 318 30.5
TWI12G1474 Tripterygium wilfordii HOM05D001711 ORTHO05D002211 3.3e-08 63.2 101 45.5
Dinv13025 Davidia involucrata HOM05D001711 ORTHO05D002211 4.3e-08 62.8 161 37.9
Lalb_Chr10g0102311 Lupinus albus HOM05D001711 ORTHO05D002211 4.3e-08 62.8 199 37.7
Oeu054843.1 Olea europaea HOM05D001711 ORTHO05D002211 4.3e-08 62.8 262 30.9
CAN.G1261.2 Capsicum annuum HOM05D001711 ORTHO05D002211 5.6e-08 62.4 307 29.6
Gorai.007G240000 Gossypium raimondii HOM05D001711 ORTHO05D002211 5.6e-08 62.4 275 29.5
Nitab4.5_0008140g0010 Nicotiana tabacum HOM05D001711 ORTHO05D002211 5.6e-08 62.4 228 34.2
Ciclev10001250m.g Citrus clementina HOM05D001711 ORTHO05D002211 7.4e-08 62.0 271 29.9
Sopen04g029150 Solanum pennellii HOM05D001711 ORTHO05D002211 7.4e-08 62.0 293 30.4
PGSC0003DMG400017724 Solanum tuberosum HOM05D001711 ORTHO05D002211 1.6e-07 60.8 289 31.1
QL06p049857 Quercus lobata HOM05D001711 ORTHO05D002211 4.8e-07 59.3 167 37.1
Gohir.A12G093700 Gossypium hirsutum HOM05D001711 ORTHO05D002211 6.2e-07 58.9 278 29.5
Hma1.2p1_0047F.1_g027920 Hydrangea macrophylla HOM05D001711 ORTHO05D002211 6.2e-07 58.9 290 25.9
MBI02_g08736_MAGBIO Magnolia biondii HOM05D001711 ORTHO05D002211 6.2e-07 58.9 305 29.8
Aqoxy6G01489 Aquilegia oxysepala HOM05D001711 ORTHO05D002211 8.1e-07 58.5 285 28.1
MSTRG.22150 Avicennia marina HOM05D001711 ORTHO05D002211 1.8e-06 57.4 139 38.8
TPR.G14352 Trifolium pratense HOM05D001711 ORTHO05D002211 1.8e-06 57.4 185 35.7
Gohir.D10G103300 Gossypium hirsutum HOM05D001711 ORTHO05D002211 3.1e-06 56.6 206 30.6
Oeu012912.1 Olea europaea HOM05D001711 ORTHO05D002211 3.1e-06 56.6 56 58.9
TWI53G1699 Tripterygium wilfordii HOM05D001711 ORTHO05D002211 3.1e-06 56.6 286 29.4
Lalb_Chr04g0253171 Lupinus albus HOM05D001711 ORTHO05D002211 4.0e-06 56.2 272 31.2
Aqoxy5G01952 Aquilegia oxysepala HOM05D001711 ORTHO05D002211 6.9e-06 55.5 205 33.7
MSTRG.24971 Avicennia marina HOM05D001711 ORTHO05D002211 6.9e-06 55.5 280 31.8
SalBow7G4583 Salvia bowleyana HOM05D001711 ORTHO05D002211 6.9e-06 55.5 98 43.9


User provided reference genes

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