Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0239361 Rosa chinensis HOM05D018137 ORTHO05D340413 1.7e-81 305.8 142 100.0
RcHm_v2.0_Chr1g0363721 Rosa chinensis HOM05D018137 ORTHO05D343934 1.3e-44 183.3 158 60.1
RcHm_v2.0_Chr4g0405391 Rosa chinensis HOM05D018137 ORTHO05D348924 4.4e-29 131.7 80 80.0
RcHm_v2.0_Chr5g0042021 Rosa chinensis HOM05D018137 ORTHO05D342665 9.7e-29 130.6 125 61.6
RcHm_v2.0_Chr5g0057351 Rosa chinensis HOM05D006059 ORTHO05D010613 2.0e-10 69.7 146 37.7
RcHm_v2.0_Chr6g0279821 Rosa chinensis HOM05D006059 ORTHO05D010613 2.9e-09 65.9 128 38.3
FAN02G0158 Fragaria x ananassa HOM05D006059 ORTHO05D207876 2.5e-08 62.8 143 32.9
RcHm_v2.0_Chr2g0158851 Rosa chinensis HOM05D018137 ORTHO05D346799 2.5e-08 62.8 57 57.9
FAN11G1542 Fragaria x ananassa HOM05D006059 ORTHO05D210510 5.6e-08 61.6 129 34.1
FvH4_5g36190 Fragaria vesca HOM05D006059 ORTHO05D046011 7.3e-08 61.2 95 42.1
RcHm_v2.0_Chr1g0329821 Rosa chinensis HOM05D003336 ORTHO05D003807 9.5e-08 60.8 45 66.7
RcHm_v2.0_Chr2g0161601 Rosa chinensis HOM05D006059 ORTHO05D010613 1.6e-07 60.1 100 39.0
RcHm_v2.0_Chr7g0227101 Rosa chinensis HOM05D006059 ORTHO05D010613 3.6e-07 58.9 80 45.0
FvH4_3g36310 Fragaria vesca HOM05D006059 ORTHO05D000610 6.1e-07 58.2 142 34.5
RcHm_v2.0_Chr2g0175631 Rosa chinensis HOM05D013926 ORTHO05D020985 6.1e-07 58.2 100 39.0
FAN25G3455 Fragaria x ananassa HOM05D006059 ORTHO05D207604 1.4e-06 57.0 131 31.3
FAN12G1423 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.8e-06 56.6 111 34.2
RcHm_v2.0_Chr4g0388241 Rosa chinensis HOM05D013926 ORTHO05D020985 1.8e-06 56.6 100 39.0
RcHm_v2.0_Chr7g0195521 Rosa chinensis HOM05D013926 ORTHO05D020985 1.8e-06 56.6 100 39.0
FAN18G3353 Fragaria x ananassa HOM05D006059 ORTHO05D010613 5.2e-06 55.1 131 31.3
FAN10G3573 Fragaria x ananassa HOM05D006059 ORTHO05D019147 6.8e-06 54.7 120 35.0


User provided reference genes

Program Settings