Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0239141 Rosa chinensis HOM05D008833 ORTHO05D010662 2.0e-47 192.2 102 100.0
RcHm_v2.0_Chr5g0038961 Rosa chinensis HOM05D008833 ORTHO05D000167 5.7e-23 110.9 100 58.0
RcHm_v2.0_Chr4g0413301 Rosa chinensis HOM05D008833 ORTHO05D010662 1.3e-22 109.8 100 59.0
RcHm_v2.0_Chr2g0122921 Rosa chinensis HOM05D008833 ORTHO05D000167 1.4e-21 106.3 100 53.0
RcHm_v2.0_Chr5g0047711 Rosa chinensis HOM05D008833 ORTHO05D000167 7.3e-18 94.0 100 51.0
RcHm_v2.0_Chr2g0142781 Rosa chinensis HOM05D008833 ORTHO05D010662 4.0e-16 88.2 101 42.6
RcHm_v2.0_Chr5g0044391 Rosa chinensis HOM05D008833 ORTHO05D010662 6.8e-16 87.4 101 43.6
RcHm_v2.0_Chr2g0135511 Rosa chinensis HOM05D008833 ORTHO05D010662 2.0e-15 85.9 101 41.6
RcHm_v2.0_Chr5g0046251 Rosa chinensis HOM05D008833 ORTHO05D010662 4.4e-15 84.7 100 42.0
RcHm_v2.0_Chr1g0320561 Rosa chinensis HOM05D008833 ORTHO05D010662 4.9e-14 81.3 87 50.6
RcHm_v2.0_Chr6g0276431 Rosa chinensis HOM05D008833 ORTHO05D010662 4.9e-14 81.3 96 42.7
FvH4_4g02431 Fragaria vesca HOM05D028367 ORTHO05D029428 6.4e-14 80.9 78 53.8
FvH4_3g02852 Fragaria vesca HOM05D045608 ORTHO05D010662 3.2e-13 78.6 67 56.7
RcHm_v2.0_Chr3g0478611 Rosa chinensis HOM05D000003 ORTHO05D000004 3.9e-11 71.6 99 39.4
RcHm_v2.0_Chr1g0337971 Rosa chinensis HOM05D008833 ORTHO05D010662 8.6e-11 70.5 74 43.2
RcHm_v2.0_Chr1g0339401 Rosa chinensis HOM05D008833 ORTHO05D010662 8.6e-11 70.5 74 43.2
FvH4_6g24151 Fragaria vesca HOM05D045608 ORTHO05D010662 4.3e-10 68.2 67 49.3
FvH4_4g07171 Fragaria vesca HOM05D008833 ORTHO05D012679 1.6e-09 66.2 100 33.0
RcHm_v2.0_Chr7g0227851 Rosa chinensis HOM05D008833 ORTHO05D000167 1.6e-09 66.2 101 32.7
FvH4_3g28461 Fragaria vesca HOM05D000003 ORTHO05D014631 4.7e-09 64.7 96 35.4
RcHm_v2.0_Chr2g0107121 Rosa chinensis HOM05D008833 ORTHO05D010662 4.7e-09 64.7 95 41.1
TWI36G1323 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 6.8e-08 60.8 96 34.4
FvH4_1g18471 Fragaria vesca HOM05D016749 ORTHO05D019194 1.5e-07 59.7 37 70.3
FvH4_4g13701 Fragaria vesca HOM05D013595 ORTHO05D010662 1.5e-07 59.7 96 36.5
FAN27G1320 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.6e-07 58.9 89 38.2
FAN28G1122 Fragaria x ananassa HOM05D013595 ORTHO05D010662 2.6e-07 58.9 94 35.1
FvH4_2g19503 Fragaria vesca HOM05D000003 ORTHO05D006737 4.4e-07 58.2 96 33.3
FAN15G0370 Fragaria x ananassa HOM05D013595 ORTHO05D010662 4.4e-07 58.2 94 34.0
FvH4_1g19421 Fragaria vesca HOM05D000003 ORTHO05D006737 1.3e-06 56.6 89 33.7
FvH4_3g20371 Fragaria vesca HOM05D000003 ORTHO05D000004 1.7e-06 56.2 87 33.3
FvH4_3g27973 Fragaria vesca HOM05D000003 ORTHO05D006737 2.2e-06 55.8 89 36.0
FvH4_6g12311 Fragaria vesca HOM05D000003 ORTHO05D000004 2.2e-06 55.8 88 36.4
RcHm_v2.0_Chr1g0314431 Rosa chinensis HOM05D000003 ORTHO05D006737 2.2e-06 55.8 84 35.7
FvH4_3g32552 Fragaria vesca HOM05D000003 ORTHO05D006737 2.9e-06 55.5 83 37.3
FvH4_4g20982 Fragaria vesca HOM05D000003 ORTHO05D006737 4.9e-06 54.7 87 33.3
FAN13G1105 Fragaria x ananassa HOM05D000003 ORTHO05D006737 4.9e-06 54.7 85 40.0
FAN18G0619 Fragaria x ananassa HOM05D000003 ORTHO05D006737 4.9e-06 54.7 85 40.0
Haze_05932 Corylus avellana HOM05D009031 ORTHO05D000167 6.4e-06 54.3 82 34.1
FvH4_1g27751 Fragaria vesca HOM05D013595 ORTHO05D010662 6.4e-06 54.3 92 32.6
FAN19G0394 Fragaria x ananassa HOM05D000003 ORTHO05D006737 8.3e-06 53.9 89 32.6
FAN19G1043 Fragaria x ananassa HOM05D000003 ORTHO05D006737 8.3e-06 53.9 89 32.6


User provided reference genes

Program Settings