Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0235961 Rosa chinensis HOM05D005210 ORTHO05D010286 2.3e-72 275.4 136 100.0
RcHm_v2.0_MTg0499091 Rosa chinensis HOM05D005210 ORTHO05D010286 2.3e-72 275.4 136 100.0
Hma1.2p1_0066F.1_g036150 Hydrangea macrophylla HOM05D005210 ORTHO05D010286 9.5e-66 253.4 134 94.0
Lj2P1229T95 Lonicera japonica HOM05D005210 ORTHO05D010286 9.9e-63 243.4 134 90.3
ClCG09G013030 Citrullus lanatus HOM05D005210 ORTHO05D010286 1.3e-62 243.0 134 89.6
FAN17G0417 Fragaria x ananassa HOM05D005210 ORTHO05D010286 2.2e-62 242.3 136 90.4
EL10Ac6g14456 Beta vulgaris HOM05D005210 ORTHO05D010286 1.4e-61 239.6 135 88.9
Dinv06682 Davidia involucrata HOM05D005210 ORTHO05D010080 1.9e-61 239.2 125 92.8
Solyc00g025290.1 Solanum lycopersicum HOM05D005210 ORTHO05D010286 2.1e-60 235.7 135 86.7
PGSC0003DMG400041193 Solanum tuberosum HOM05D005210 ORTHO05D010286 2.1e-60 235.7 135 86.7
AUR62042343 Chenopodium quinoa HOM05D005210 ORTHO05D010286 6.0e-60 234.2 135 88.1
AUR62043906 Chenopodium quinoa HOM05D005210 ORTHO05D010286 6.0e-60 234.2 135 88.1
SalBow1G3053 Salvia bowleyana HOM05D005210 ORTHO05D010286 1.7e-59 232.6 135 87.4
Actinidia34888 Actinidia chinensis HOM05D005210 ORTHO05D010080 5.1e-59 231.1 122 93.4
Cfa021370 Carpinus fangiana HOM05D002864 ORTHO05D008485 5.1e-59 231.1 122 93.4
RhsimMtG0002800 Rhododendron simsii HOM05D002864 ORTHO05D008485 3.3e-58 228.4 127 88.2
arahy.Tifrunner.gnm1.ann1.QPLA3G Arachis hypogaea HOM05D005210 ORTHO05D010080 5.2e-56 221.1 118 92.4
Ah.10g028400 Amaranthus hybridus HOM05D005210 ORTHO05D010286 5.8e-55 217.6 129 85.3
CAN.G1.5 Capsicum annuum HOM05D005210 ORTHO05D010286 3.5e-52 208.4 134 79.9
SabraMtG0001200 Salix brachista HOM05D005210 ORTHO05D010286 1.0e-51 206.8 115 90.4
Peaxi162Scf00489g00022 Petunia axillaris HOM05D005210 ORTHO05D011782 5.1e-43 177.9 99 87.9
Nitab4.5_0007225g0020 Nicotiana tabacum HOM05D005210 ORTHO05D010286 3.3e-42 175.3 101 84.2
CAN.G85.24 Capsicum annuum HOM05D005210 ORTHO05D010286 9.6e-42 173.7 97 86.6
LjContig00439g0018526 Lotus japonicus HOM05D005210 ORTHO05D010286 2.8e-41 172.2 127 73.2
Lsat_1_v5_gn_2_41741 Lactuca sativa HOM05D005210 ORTHO05D010286 1.2e-39 166.8 141 68.8
Lsat_1_v5_gn_6_2961 Lactuca sativa HOM05D005210 ORTHO05D010286 1.2e-39 166.8 141 68.8
Lsat_1_v5_gn_5_16200 Lactuca sativa HOM05D005210 ORTHO05D010286 4.5e-39 164.9 139 69.1
Sopen11g014320 Solanum pennellii HOM05D005210 ORTHO05D010286 3.2e-37 158.7 91 85.7
Lsat_1_v5_gn_5_16401 Lactuca sativa HOM05D005210 ORTHO05D010286 2.1e-36 156.0 138 65.9
CARHR283020 Cardamine hirsuta HOM05D005210 ORTHO05D010286 3.0e-35 152.1 85 87.1
ATMG00660 Arabidopsis thaliana HOM05D005210 ORTHO05D010286 3.9e-35 151.8 85 87.1
HanXRQMTg0579401 Helianthus annuus HOM05D005210 ORTHO05D010286 3.7e-33 145.2 83 86.7
HanXRQChr14g0460771 Helianthus annuus HOM05D005210 ORTHO05D010286 1.1e-32 143.7 83 85.5
arahy.Tifrunner.gnm1.ann1.2DSY3L Arachis hypogaea HOM05D005210 ORTHO05D010286 1.4e-24 116.7 57 94.7
Nitab4.5_0009709g0010 Nicotiana tabacum HOM05D005210 ORTHO05D010286 2.4e-24 115.9 79 73.4
TPR.G28261 Trifolium pratense HOM05D005210 ORTHO05D010286 2.0e-23 112.8 57 94.7
ECA039G0011 Erigeron canadensis HOM05D005210 ORTHO05D010286 7.6e-23 110.9 54 94.4
Lsat_1_v5_gn_0_34981 Lactuca sativa HOM05D005210 ORTHO05D010286 7.6e-23 110.9 54 94.4
Glyma.12G155200 Glycine max HOM05D005210 ORTHO05D010286 1.1e-21 107.1 57 91.2
Manes.16G058078 Manihot esculenta HOM05D005210 ORTHO05D010286 2.3e-19 99.4 58 87.9
Oeu002130.1 Olea europaea HOM05D005210 ORTHO05D010286 3.0e-19 99.0 93 60.2
unitig_87.g27938 Utricularia gibba HOM05D005210 ORTHO05D010286 8.8e-19 97.4 66 77.3
BraSC48t46322Z Brassica rapa HOM05D005210 ORTHO05D010286 2.0e-15 86.3 90 57.8
TPR.G24723 Trifolium pratense HOM05D005210 ORTHO05D010286 3.4e-15 85.5 99 51.5
MELO3C030616.2 Cucumis melo HOM05D005210 ORTHO05D010286 1.9e-13 79.7 53 79.2
SHI11895 Sapria himalayana HOM05D005210 ORTHO05D010286 6.1e-12 74.7 60 68.3
Thhalv10023031m.g Eutrema salsugineum HOM05D005210 ORTHO05D010286 3.7e-09 65.5 85 45.9
Peaxi162Scf00700g00729 Petunia axillaris HOM05D001102 ORTHO05D001018 8.5e-06 54.3 42 64.3


User provided reference genes

Program Settings