Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0229551 Rosa chinensis HOM05D066344 ORTHO05D050710 6.9e-51 203.8 108 100.0
RcHm_v2.0_Chr6g0253301 Rosa chinensis HOM05D066344 ORTHO05D050710 1.9e-45 185.7 108 90.7
RcHm_v2.0_Chr5g0022091 Rosa chinensis HOM05D000336 ORTHO05D002705 1.5e-18 96.3 58 84.5
FAN25G0380 Fragaria x ananassa HOM05D000336 ORTHO05D002705 3.0e-14 82.0 62 71.0
FAN11G2885 Fragaria x ananassa HOM05D000336 ORTHO05D002705 3.9e-14 81.6 58 77.6
CiPaw.02G175600 Carya illinoinensis HOM05D000336 ORTHO05D002705 2.6e-10 68.9 65 55.4
FAN21G2099 Fragaria x ananassa HOM05D000336 ORTHO05D002705 1.7e-09 66.2 58 63.8
FvH4_3g13380 Fragaria vesca HOM05D000336 ORTHO05D002705 8.5e-09 63.9 58 62.1
MD01G1111300 Malus domestica HOM05D000336 ORTHO05D002705 9.4e-08 60.5 65 47.7
Dinv11796 Davidia involucrata HOM05D000336 ORTHO05D002705 1.2e-07 60.1 65 52.3
QL08p056651 Quercus lobata HOM05D000336 ORTHO05D002705 1.2e-07 60.1 89 42.7
TWI60G1326 Tripterygium wilfordii HOM05D000336 ORTHO05D002705 1.2e-07 60.1 73 47.9
Haze_16925 Corylus avellana HOM05D000336 ORTHO05D002705 1.6e-07 59.7 65 50.8
Lj1A919T51 Lonicera japonica HOM05D000336 ORTHO05D002705 8.0e-07 57.4 65 50.8
Solyc09g015660.4 Solanum lycopersicum HOM05D000336 ORTHO05D002705 1.0e-06 57.0 85 44.7
Prupe.2G216800 Prunus persica HOM05D000336 ORTHO05D002705 1.4e-06 56.6 59 47.5
Sopen09g009860 Solanum pennellii HOM05D000336 ORTHO05D002705 1.4e-06 56.6 85 44.7
Sabra10G0169200 Salix brachista HOM05D000336 ORTHO05D002705 1.8e-06 56.2 71 46.5
Sabra08G0029600 Salix brachista HOM05D000336 ORTHO05D002705 2.3e-06 55.8 69 46.4
DCAR_015307 Daucus carota HOM05D000336 ORTHO05D002705 3.0e-06 55.5 65 49.2
Potri.008G043000 Populus trichocarpa HOM05D000336 ORTHO05D002705 3.0e-06 55.5 71 45.1
CSS0016673 Camellia sinensis var. sinensis HOM05D000336 ORTHO05D002705 5.2e-06 54.7 65 49.2
Haze_05184 Corylus avellana HOM05D000336 ORTHO05D002705 5.2e-06 54.7 58 50.0
FAN16G1640 Fragaria x ananassa HOM05D000336 ORTHO05D002705 5.2e-06 54.7 57 54.4
Glyma.17G182700 Glycine max HOM05D000336 ORTHO05D002705 5.2e-06 54.7 65 46.2
Gohir.D10G215500 Gossypium hirsutum HOM05D000336 ORTHO05D002705 5.2e-06 54.7 68 45.6
Gorai.011G241100 Gossypium raimondii HOM05D000336 ORTHO05D002705 5.2e-06 54.7 68 45.6
Lalb_Chr19g0129591 Lupinus albus HOM05D000336 ORTHO05D002705 5.2e-06 54.7 65 41.5
QL11p010714 Quercus lobata HOM05D000336 ORTHO05D002705 5.2e-06 54.7 59 49.2
SalBow3G0905 Salvia bowleyana HOM05D000336 ORTHO05D002705 5.2e-06 54.7 61 52.5
TWI34G1554 Tripterygium wilfordii HOM05D000336 ORTHO05D002705 5.2e-06 54.7 68 47.1
Prupe.4G121200 Prunus persica HOM05D000336 ORTHO05D002705 6.7e-06 54.3 61 52.5


User provided reference genes

Program Settings