Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 1.9e-71 272.3 128 100.0
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 3.9e-61 238.0 131 86.3
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 1.2e-41 173.3 102 82.4
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 3.8e-40 168.3 127 68.5
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 2.1e-38 162.5 102 79.4
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 5.1e-37 157.9 95 75.8
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 8.8e-37 157.1 133 63.2
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 4.3e-36 154.8 126 64.3
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 5.7e-36 154.5 78 89.7
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 5.7e-36 154.5 78 89.7
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 6.3e-35 151.0 97 70.1
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 8.2e-35 150.6 77 84.4
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 1.4e-34 149.8 119 63.0
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 1.4e-34 149.8 106 67.9
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 1.8e-34 149.4 106 67.9
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 1.8e-34 149.4 106 67.9
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 1.8e-34 149.4 109 67.9
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 3.1e-34 148.7 85 76.5
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 9.1e-34 147.1 84 77.4
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 1.2e-33 146.7 97 72.2
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 1.5e-33 146.4 76 80.3
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 1.5e-33 146.4 97 72.2
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 2.0e-33 146.0 84 79.8
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 2.6e-33 145.6 76 80.3
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 3.4e-33 145.2 76 81.6
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 4.5e-33 144.8 105 62.9
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 4.5e-33 144.8 109 67.0
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 5.9e-33 144.4 100 66.0
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 7.7e-33 144.1 106 64.2
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 7.7e-33 144.1 112 61.6
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 1.0e-32 143.7 86 77.9
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 1.3e-32 143.3 99 66.7
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 1.7e-32 142.9 83 78.3
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 2.2e-32 142.5 99 65.7
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 2.2e-32 142.5 118 61.0
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 3.8e-32 141.7 84 76.2
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 5.0e-32 141.4 84 75.0
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 6.5e-32 141.0 107 64.5
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 8.5e-32 140.6 84 75.0
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 8.5e-32 140.6 88 67.0
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 1.9e-31 139.4 84 73.8
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 1.9e-31 139.4 79 77.2
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 4.2e-31 138.3 85 72.9
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 7.2e-31 137.5 78 78.2
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 1.6e-30 136.3 78 79.5
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 2.7e-30 135.6 108 61.1
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 2.3e-29 132.5 127 63.0
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 6.7e-29 131.0 108 59.3
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 1.1e-28 130.2 94 63.8
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 1.5e-28 129.8 103 61.2
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 1.5e-28 129.8 103 61.2
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 2.0e-28 129.4 87 66.7
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 7.4e-28 127.5 107 60.7
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 1.8e-26 122.9 91 61.5
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 3.1e-26 122.1 79 73.4
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 1.2e-25 120.2 76 69.7
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 1.2e-25 120.2 97 61.9
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 5.9e-25 117.9 128 54.7
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 7.7e-25 117.5 101 62.4
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 1.3e-24 116.7 117 55.6
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 2.2e-24 115.9 128 49.2
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 3.8e-24 115.2 89 60.7
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 5.0e-24 114.8 83 61.4
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 9.4e-23 110.5 130 47.7
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 3.6e-22 108.6 85 60.0
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 4.7e-22 108.2 127 47.2
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 4.0e-21 105.1 102 53.9
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 2.0e-20 102.8 77 63.6
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 2.0e-20 102.8 61 70.5
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 3.7e-19 98.6 45 93.3
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 3.1e-18 95.5 114 49.1
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 1.2e-17 93.6 136 39.7
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 3.5e-17 92.0 66 66.7
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 7.7e-17 90.9 46 82.6
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 1.3e-16 90.1 66 62.1
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 1.7e-16 89.7 77 58.4
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 1.7e-16 89.7 95 48.4
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 2.2e-16 89.4 95 50.5
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 1.1e-15 87.0 130 43.8
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 5.5e-15 84.7 82 52.4
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 3.4e-12 75.5 64 56.2
CBR_g36554 Chara braunii HOM05D007955 ORTHO05D010034 3.2e-07 58.9 30 76.7


User provided reference genes

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