Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0225321 Rosa chinensis HOM05D006668 ORTHO05D008252 9.4e-50 199.9 102 100.0
RcHm_v2.0_Chr7g0225261 Rosa chinensis HOM05D006668 ORTHO05D008252 1.4e-45 186.0 102 94.1
FAN13G2061 Fragaria x ananassa HOM05D006668 ORTHO05D008252 2.1e-33 145.6 102 78.4
FvH4_5g30510 Fragaria vesca HOM05D006668 ORTHO05D008252 1.8e-32 142.5 102 76.5
FAN08G3049 Fragaria x ananassa HOM05D006668 ORTHO05D008252 1.8e-32 142.5 102 77.5
FAN18G2410 Fragaria x ananassa HOM05D006668 ORTHO05D008252 4.0e-32 141.4 102 76.5
Prupe.2G094200 Prunus persica HOM05D006668 ORTHO05D008252 2.5e-26 122.1 107 64.5
MD15G1126800 Malus domestica HOM05D006668 ORTHO05D008252 3.7e-22 108.2 107 59.8
Ciclev10015198m.g Citrus clementina HOM05D006668 ORTHO05D008252 2.4e-13 79.0 109 45.9
TAR627G0647 Trochodendron aralioides HOM05D006668 ORTHO05D008252 1.6e-12 76.3 126 46.8
QL08p040692 Quercus lobata HOM05D006668 ORTHO05D008252 2.7e-12 75.5 111 46.8
Glyma.06G287100 Glycine max HOM05D006668 ORTHO05D008252 4.6e-12 74.7 111 46.8
Atru.chr6.2861 Acer truncatum HOM05D006668 ORTHO05D008252 1.0e-11 73.6 108 44.4
GSVIVG01020613001 Vitis vinifera HOM05D006668 ORTHO05D008252 1.3e-11 73.2 112 44.6
Cpa.g.sc165.1 Carica papaya HOM05D006668 ORTHO05D008252 2.3e-11 72.4 111 39.6
Manes.12G086300 Manihot esculenta HOM05D006668 ORTHO05D008252 2.3e-11 72.4 113 49.6
Dinv06849 Davidia involucrata HOM05D006668 ORTHO05D008252 1.5e-10 69.7 125 44.8
Sabra17G0013400 Salix brachista HOM05D006668 ORTHO05D008252 1.5e-10 69.7 139 39.6
VMungo0037G0001 Vigna mungo HOM05D006668 ORTHO05D008252 1.5e-10 69.7 112 45.5
Cc05_g07800 Coffea canephora HOM05D006668 ORTHO05D008252 2.5e-10 68.9 103 44.7
arahy.Tifrunner.gnm1.ann1.Y4MWM5 Arachis hypogaea HOM05D006668 ORTHO05D008252 4.7e-09 64.7 109 41.3
CiPaw.03G182600 Carya illinoinensis HOM05D006668 ORTHO05D008252 1.1e-08 63.5 114 43.0
Potri.017G017200 Populus trichocarpa HOM05D006668 ORTHO05D008252 1.4e-08 63.2 151 35.8
TWI59G1373 Tripterygium wilfordii HOM05D006668 ORTHO05D008252 2.3e-08 62.4 109 45.0
Actinidia10993 Actinidia chinensis HOM05D006668 ORTHO05D008252 4.0e-08 61.6 111 41.4
CSS0027561 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 8.9e-08 60.5 115 40.9
Haze_13262 Corylus avellana HOM05D006668 ORTHO05D008252 8.9e-08 60.5 109 44.0
Lalb_Chr03g0029681 Lupinus albus HOM05D006668 ORTHO05D008252 1.5e-07 59.7 108 44.4
Medtr4g079100 Medicago truncatula HOM05D006668 ORTHO05D008252 1.5e-07 59.7 104 41.3
Thecc.02G187500 Theobroma cacao HOM05D006668 ORTHO05D008252 2.6e-07 58.9 141 35.5
TPR.G14253 Trifolium pratense HOM05D006668 ORTHO05D008252 2.6e-07 58.9 104 40.4
Ca_18916_v3 Cicer arietinum L. HOM05D006668 ORTHO05D008252 3.4e-07 58.5 104 38.5
CSS0037366 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 4.4e-07 58.2 78 47.4
DCAR_009761 Daucus carota HOM05D006668 ORTHO05D008252 5.8e-07 57.8 112 37.5
vmacro12351 Vaccinium macrocarpon HOM05D006668 ORTHO05D008252 7.5e-07 57.4 113 40.7
CsaV3_7G003140 Cucumis sativus L. HOM05D006668 ORTHO05D008252 1.3e-06 56.6 108 38.0
Sopen07g027510 Solanum pennellii HOM05D006668 ORTHO05D008252 2.9e-06 55.5 116 39.7
Sed0009608 Sechium edule HOM05D006668 ORTHO05D008252 6.4e-06 54.3 111 41.4


User provided reference genes

Program Settings