Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0224811 Rosa chinensis HOM05D005912 ORTHO05D007329 3.6e-33 144.4 78 100.0
RcHm_v2.0_Chr4g0418411 Rosa chinensis HOM05D005912 ORTHO05D007329 3.4e-31 137.9 78 96.2
RcHm_v2.0_Chr2g0098181 Rosa chinensis HOM05D005912 ORTHO05D007329 2.5e-18 95.1 68 77.9
FvH4_1g10920 Fragaria vesca HOM05D005912 ORTHO05D007329 8.0e-17 90.1 68 73.5
FAN23G1227 Fragaria x ananassa HOM05D005912 ORTHO05D007329 8.0e-17 90.1 68 72.1
FAN26G2135 Fragaria x ananassa HOM05D005912 ORTHO05D007329 6.8e-16 87.0 68 72.1
Prupe.7G176300 Prunus persica HOM05D005912 ORTHO05D007329 8.9e-16 86.7 60 76.7
MD02G1122300 Malus domestica HOM05D005912 ORTHO05D007329 4.4e-15 84.3 60 75.0
arahy.Tifrunner.gnm1.ann1.JJKM7S Arachis hypogaea HOM05D005912 ORTHO05D007329 1.9e-10 68.9 68 55.9
arahy.Tifrunner.gnm1.ann1.TNL2KY Arachis hypogaea HOM05D005912 ORTHO05D007329 1.9e-10 68.9 68 55.9
Haze_03689 Corylus avellana HOM05D005912 ORTHO05D007329 7.3e-10 67.0 60 61.7
Duzib147G0472 Durio zibethinus HOM05D005912 ORTHO05D007329 9.5e-10 66.6 60 60.0
Lj4A227T48 Lonicera japonica HOM05D005912 ORTHO05D007329 1.2e-09 66.2 60 61.7
CsaV3_6G047590 Cucumis sativus L. HOM05D005912 ORTHO05D007329 1.6e-09 65.9 60 63.3
Lj2A487G56 Lonicera japonica HOM05D005912 ORTHO05D007329 1.6e-09 65.9 60 60.0
Cfa007040 Carpinus fangiana HOM05D005912 ORTHO05D007329 2.8e-09 65.1 60 60.0
ClCG01G020670 Citrullus lanatus HOM05D005912 ORTHO05D007329 2.8e-09 65.1 60 63.3
Lj2A933T26 Lonicera japonica HOM05D005912 ORTHO05D007329 3.6e-09 64.7 60 60.0
Lj2g0008610 Lotus japonicus HOM05D005912 ORTHO05D007329 3.6e-09 64.7 60 63.3
Medtr5g023180 Medicago truncatula HOM05D005912 ORTHO05D007329 3.6e-09 64.7 60 58.3
CANSAT25G2212 Cannabis sativa HOM05D005912 ORTHO05D007329 4.7e-09 64.3 60 60.0
COL.COLO4_09868 Corchorus olitorius HOM05D005912 ORTHO05D007329 4.7e-09 64.3 60 61.7
CiPaw.08G179600 Carya illinoinensis HOM05D005912 ORTHO05D007329 1.0e-08 63.2 60 58.3
TPR.G25119 Trifolium pratense HOM05D005912 ORTHO05D007329 1.0e-08 63.2 60 55.0
Cc07_g11440 Coffea canephora HOM05D005912 ORTHO05D007329 1.4e-08 62.8 68 57.4
Gohir.D03G004600 Gossypium hirsutum HOM05D005912 ORTHO05D007329 1.4e-08 62.8 60 56.7
Gorai.003G004900 Gossypium raimondii HOM05D005912 ORTHO05D007329 1.4e-08 62.8 60 56.7
Ca_24951_v3 Cicer arietinum L. HOM05D005912 ORTHO05D007329 1.8e-08 62.4 60 55.0
Psat2g151360 Pisum sativum HOM05D005912 ORTHO05D007329 1.8e-08 62.4 60 56.7
Sed0007504 Sechium edule HOM05D005912 ORTHO05D007329 2.3e-08 62.0 60 60.0
TWI73G1263 Tripterygium wilfordii HOM05D005912 ORTHO05D007329 3.1e-08 61.6 60 56.7
Gohir.A02G175200 Gossypium hirsutum HOM05D005912 ORTHO05D007329 4.0e-08 61.2 60 55.0
GSVIVG01002335001 Vitis vinifera HOM05D005912 ORTHO05D007329 4.0e-08 61.2 60 56.7
Thecc.01G010100 Theobroma cacao HOM05D005912 ORTHO05D007329 5.2e-08 60.8 60 58.3
Cpa.g.sc6.326 Carica papaya HOM05D005912 ORTHO05D007329 6.8e-08 60.5 60 56.7
HanXRQChr14g0442051 Helianthus annuus HOM05D005912 ORTHO05D007329 6.8e-08 60.5 60 55.0
QL06p052316 Quercus lobata HOM05D005912 ORTHO05D007329 1.2e-07 59.7 60 55.0
Sabra05G0087400 Salix brachista HOM05D005912 ORTHO05D007329 1.2e-07 59.7 68 51.5
Sopen02g028060 Solanum pennellii HOM05D005912 ORTHO05D007329 2.6e-07 58.5 78 51.3
PGSC0003DMG400001581 Solanum tuberosum HOM05D005912 ORTHO05D007329 2.6e-07 58.5 78 50.0
Atru.chr3.926 Acer truncatum HOM05D005912 ORTHO05D007329 3.4e-07 58.2 60 58.3
ECA238G3446 Erigeron canadensis HOM05D005912 ORTHO05D007329 3.4e-07 58.2 60 55.0
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 3.4e-07 58.2 60 55.0
PSO541G6093 Papaver somniferum HOM05D005912 ORTHO05D007329 3.4e-07 58.2 60 56.7
PSO675G2300 Papaver somniferum HOM05D005912 ORTHO05D007329 3.4e-07 58.2 60 56.7
TAR288G0001 Trochodendron aralioides HOM05D005912 ORTHO05D007329 3.4e-07 58.2 60 53.3
CAN.G890.19 Capsicum annuum HOM05D005912 ORTHO05D007329 4.4e-07 57.8 78 50.0
Solyc02g083270.4 Solanum lycopersicum HOM05D005912 ORTHO05D007329 4.4e-07 57.8 78 51.3
Eucgr.J02496 Eucalyptus grandis HOM05D005912 ORTHO05D007329 7.5e-07 57.0 60 55.0
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 7.5e-07 57.0 60 56.7
Peaxi162Scf00300g00017 Petunia axillaris HOM05D005912 ORTHO05D007329 7.5e-07 57.0 60 55.0
Aa31LG6G12710 Aethionema arabicum HOM05D005912 ORTHO05D007329 1.3e-06 56.2 70 51.4
Glyma.11G082400 Glycine max HOM05D005912 ORTHO05D007329 1.3e-06 56.2 68 52.9
HanXRQChr07g0192501 Helianthus annuus HOM05D005912 ORTHO05D007329 1.3e-06 56.2 60 53.3
Actinidia17396 Actinidia chinensis HOM05D005912 ORTHO05D007329 1.7e-06 55.8 60 53.3
Nn6g31870 Nelumbo nucifera HOM05D005912 ORTHO05D007329 1.7e-06 55.8 65 50.8
Ciclev10025822m.g Citrus clementina HOM05D005912 ORTHO05D007329 2.2e-06 55.5 60 56.7
Phvul.002G112700 Phaseolus vulgaris HOM05D005912 ORTHO05D007329 2.2e-06 55.5 68 52.9
Rhsim10G0204000 Rhododendron simsii HOM05D005912 ORTHO05D007329 2.2e-06 55.5 60 51.7
TAR625G0585 Trochodendron aralioides HOM05D005912 ORTHO05D007329 2.2e-06 55.5 60 51.7
VMungo1215G0927 Vigna mungo HOM05D005912 ORTHO05D007329 2.2e-06 55.5 68 52.9
Potri.005G106500 Populus trichocarpa HOM05D005912 ORTHO05D007329 2.9e-06 55.1 68 48.5
vmacro20502 Vaccinium macrocarpon HOM05D005912 ORTHO05D007329 2.9e-06 55.1 60 50.0
Aqoxy6G01899 Aquilegia oxysepala HOM05D005912 ORTHO05D007329 3.7e-06 54.7 65 49.2
PGR102G2191 Punica granatum HOM05D005912 ORTHO05D007329 3.7e-06 54.7 68 52.9
CSS0031078 Camellia sinensis var. sinensis HOM05D005912 ORTHO05D007329 4.9e-06 54.3 60 51.7
MBI08_g40329_MAGBIO Magnolia biondii HOM05D005912 ORTHO05D007329 6.4e-06 53.9 68 44.1


User provided reference genes

Program Settings