Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 6.0e-244 847.0 421 100.0
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 3.1e-216 755.0 425 89.9
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.7e-201 706.1 459 81.7
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 2.0e-199 699.1 422 86.0
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 3.4e-194 681.8 427 81.5
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 9.8e-194 680.2 425 83.3
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 8.3e-193 677.2 422 83.4
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 4.4e-178 628.2 406 78.8
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 2.9e-177 625.5 418 75.8
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 4.7e-172 608.2 392 77.6
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 4.7e-172 608.2 415 74.7
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 2.3e-171 605.9 378 80.2
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 3.1e-171 605.5 392 77.3
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 5.8e-170 601.3 395 78.2
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 8.3e-169 597.4 367 81.7
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 4.1e-168 595.1 410 73.4
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 6.0e-167 591.3 389 75.3
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 6.6e-166 587.8 391 77.0
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 8.6e-166 587.4 404 74.5
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 2.5e-165 585.9 403 73.0
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 2.5e-165 585.9 368 76.4
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 5.6e-165 584.7 387 76.0
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 5.6e-165 584.7 389 75.1
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 2.8e-164 582.4 396 74.0
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 8.1e-164 580.9 382 77.0
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 1.1e-163 580.5 389 74.3
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 2.0e-162 576.2 418 71.1
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 9.9e-162 573.9 387 74.7
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 1.7e-161 573.2 394 71.6
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 2.9e-161 572.4 395 73.7
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 6.4e-161 571.2 365 77.0
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 6.4e-161 571.2 364 76.1
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 8.4e-161 570.9 367 76.6
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 2.4e-160 569.3 366 77.9
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 2.4e-160 569.3 366 76.0
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 7.1e-160 567.8 389 73.8
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 3.5e-159 565.5 406 69.7
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 3.5e-159 565.5 393 71.0
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 3.5e-159 565.5 393 71.0
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 1.7e-158 563.1 399 69.9
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 3.9e-158 562.0 369 75.9
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 4.3e-157 558.5 390 69.7
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 1.6e-156 556.6 404 68.8
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 2.1e-156 556.2 358 75.7
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 2.8e-156 555.8 370 72.2
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 2.8e-156 555.8 370 72.2
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 3.6e-156 555.4 401 68.3
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 3.6e-156 555.4 389 71.2
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 1.8e-155 553.1 370 72.7
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 1.8e-155 553.1 404 68.6
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 6.9e-155 551.2 370 71.9
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 6.9e-155 551.2 365 71.8
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 6.9e-155 551.2 398 67.6
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 2.6e-154 549.3 377 71.6
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 3.4e-154 548.9 362 74.0
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 1.3e-153 547.0 365 71.5
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 1.7e-153 546.6 365 71.2
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.4e-152 542.7 423 70.7
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 2.4e-152 542.7 352 76.4
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 3.2e-152 542.3 413 67.6
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 4.2e-152 542.0 422 63.7
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 9.3e-152 540.8 424 65.6
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 2.1e-151 539.7 417 68.1
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 6.0e-151 538.1 342 75.1
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 6.6e-150 534.6 350 76.0
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 2.5e-149 532.7 418 65.1
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 4.3e-149 531.9 400 66.2
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 7.3e-149 531.2 362 72.1
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 5.3e-147 525.0 399 67.4
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 2.0e-146 523.1 374 69.0
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 9.9e-146 520.8 363 71.3
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 2.9e-145 519.2 385 68.8
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 4.9e-145 518.5 369 69.1
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 1.6e-143 513.5 371 69.5
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 1.5e-141 506.9 347 73.2
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 9.6e-141 504.2 394 67.0
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 3.7e-140 502.3 364 67.3
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 1.1e-139 500.7 354 69.2
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 2.6e-138 496.1 481 55.9
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 3.8e-137 492.3 387 64.3
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 8.2e-132 474.6 356 68.3
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 2.1e-127 459.9 378 61.1
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 2.5e-125 453.0 319 72.7
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 2.4e-123 446.4 434 58.3
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 1.0e-118 431.0 410 58.5
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 2.5e-117 426.4 360 59.2
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 2.2e-116 423.3 359 56.8
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 2.8e-108 396.4 346 56.4
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 5.9e-106 388.7 359 53.8
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 2.2e-105 386.7 412 53.4
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 3.3e-101 372.9 235 74.9
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 2.2e-100 370.2 235 74.5
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 3.2e-96 356.3 395 48.1
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 3.0e-86 323.2 287 58.2
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 3.8e-81 306.2 326 51.5
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 8.3e-68 261.9 372 41.4
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.0e-65 255.0 361 45.7
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 1.0e-49 201.8 130 73.8
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 9.5e-48 195.3 130 71.5
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 2.1e-42 177.6 188 52.1
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 1.2e-39 168.3 133 63.2
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 4.4e-37 159.8 108 68.5
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 3.8e-28 130.2 79 74.7
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 1.9e-27 127.9 112 57.1
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 3.0e-25 120.6 125 50.4
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 3.3e-24 117.1 168 41.1
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 1.8e-22 111.3 83 67.5
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 1.8e-22 111.3 377 27.3
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 2.2e-20 104.4 67 74.6
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 4.9e-20 103.2 115 54.8
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 6.4e-20 102.8 78 66.7
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 1.4e-19 101.7 99 55.6
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 2.8e-15 87.4 224 31.7
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 1.1e-14 85.5 179 33.5
Pp3c4_15010 Physcomitrium patens HOM05D004784 ORTHO05D005762 1.0e-12 79.0 351 25.4
Pp3c12_9500 Physcomitrium patens HOM05D004784 ORTHO05D005762 1.3e-12 78.6 341 25.2
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 6.5e-12 76.3 52 69.2
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 8.4e-12 75.9 52 75.0
Phvul.006G148700 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 8.4e-12 75.9 362 24.9
MCO09G354 Micromonas commoda HOM05D006894 ORTHO05D008724 9.0e-06 55.8 249 25.3


User provided reference genes

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