Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0221531 Rosa chinensis HOM05D003468 ORTHO05D002806 2.5e-159 565.5 299 100.0
RcHm_v2.0_Chr7g0218431 Rosa chinensis HOM05D003468 ORTHO05D002806 9.5e-143 510.4 298 88.3
FvH4_5g27240 Fragaria vesca HOM05D003468 ORTHO05D002806 3.0e-88 329.3 294 62.2
FAN18G3325 Fragaria x ananassa HOM05D003468 ORTHO05D002806 3.0e-88 329.3 294 62.2
FAN04G1909 Fragaria x ananassa HOM05D003468 ORTHO05D002806 1.1e-87 327.4 294 62.2
FAN08G2580 Fragaria x ananassa HOM05D003468 ORTHO05D002806 7.4e-87 324.7 294 62.2
FAN13G0004 Fragaria x ananassa HOM05D003468 ORTHO05D002806 1.2e-68 264.2 294 53.1
RcHm_v2.0_Chr5g0000441 Rosa chinensis HOM05D003468 ORTHO05D002806 8.2e-62 241.5 247 60.3
RcHm_v2.0_Chr5g0073101 Rosa chinensis HOM05D003468 ORTHO05D002806 1.5e-58 230.7 212 62.7
FAN21G2193 Fragaria x ananassa HOM05D003468 ORTHO05D002806 2.0e-52 210.3 253 52.6
FvH4_5g00450 Fragaria vesca HOM05D003468 ORTHO05D002806 3.8e-51 206.1 273 49.8
FAN16G1667 Fragaria x ananassa HOM05D003468 ORTHO05D002806 5.0e-51 205.7 254 52.4
FvH4_3g40451 Fragaria vesca HOM05D003468 ORTHO05D002806 1.6e-49 200.7 253 50.2
FAN11G0916 Fragaria x ananassa HOM05D003468 ORTHO05D002806 1.6e-49 200.7 253 50.2
FAN13G3328 Fragaria x ananassa HOM05D003468 ORTHO05D002806 9.8e-47 191.4 317 44.2
FAN18G2440 Fragaria x ananassa HOM05D003468 ORTHO05D002806 4.9e-46 189.1 265 48.7
FAN04G2590 Fragaria x ananassa HOM05D003468 ORTHO05D002806 1.8e-40 170.6 221 50.2
MD03G1052200 Malus domestica HOM05D003468 ORTHO05D002806 6.8e-32 142.1 201 46.8
MD11G1054300 Malus domestica HOM05D003468 ORTHO05D002806 2.0e-31 140.6 217 45.6
Prupe.6G041700 Prunus persica HOM05D003468 ORTHO05D002806 6.0e-28 129.0 289 33.2
CANSAT54G1733 Cannabis sativa HOM05D003468 ORTHO05D002806 1.4e-16 91.3 187 36.4
Haze_24464 Corylus avellana HOM05D003468 ORTHO05D002806 9.9e-15 85.1 186 34.4
Dinv12277 Davidia involucrata HOM05D003468 ORTHO05D002806 9.9e-15 85.1 188 34.6
CANSAT25G2600 Cannabis sativa HOM05D003468 ORTHO05D002806 1.4e-13 81.3 198 33.8
Dinv28729 Davidia involucrata HOM05D003468 ORTHO05D002806 7.1e-13 79.0 166 34.3
Ciclev10028601m.g Citrus clementina HOM05D003468 ORTHO05D002806 6.0e-12 75.9 181 32.6
CiPaw.14G050900 Carya illinoinensis HOM05D003468 ORTHO05D002806 3.0e-11 73.6 168 33.9
Thecc.06G237700 Theobroma cacao HOM05D003468 ORTHO05D002806 1.1e-10 71.6 220 32.3
Cfa021527 Carpinus fangiana HOM05D003468 ORTHO05D002806 2.5e-10 70.5 180 32.8
GSVIVG01024564001 Vitis vinifera HOM05D003468 ORTHO05D002806 2.8e-09 67.0 181 29.8
CSS0029508 Camellia sinensis var. sinensis HOM05D003468 ORTHO05D002806 6.2e-09 65.9 186 27.4
QL01p024883 Quercus lobata HOM05D003468 ORTHO05D002806 6.2e-09 65.9 209 29.2
TAR633G1116 Trochodendron aralioides HOM05D003468 ORTHO05D002806 6.2e-09 65.9 196 30.6
Nn3g19626 Nelumbo nucifera HOM05D003468 ORTHO05D002806 1.1e-08 65.1 182 31.9
Actinidia34492 Actinidia chinensis HOM05D003468 ORTHO05D002806 2.4e-08 63.9 187 29.4
COL.COLO4_13781 Corchorus olitorius HOM05D003468 ORTHO05D002806 6.9e-08 62.4 190 30.0
QL02p099821 Quercus lobata HOM05D003468 ORTHO05D002806 1.2e-07 61.6 251 26.7
SHI19247 Sapria himalayana HOM05D003468 ORTHO05D002806 1.5e-07 61.2 170 32.9
VMungo0540G0681 Vigna mungo HOM05D003468 ORTHO05D002806 1.5e-07 61.2 177 31.1
ECA247G2629 Erigeron canadensis HOM05D003468 ORTHO05D002806 2.6e-07 60.5 226 28.3
Eucgr.B00490 Eucalyptus grandis HOM05D003468 ORTHO05D002806 2.6e-07 60.5 217 29.5
Cc01_g15290 Coffea canephora HOM05D003468 ORTHO05D002806 3.4e-07 60.1 165 30.3
Hma1.2p1_0170F.1_g075010 Hydrangea macrophylla HOM05D003468 ORTHO05D002806 3.4e-07 60.1 200 30.5
Psat5g148920 Pisum sativum HOM05D003468 ORTHO05D002806 3.4e-07 60.1 178 31.5
Rhsim01G0242800 Rhododendron simsii HOM05D003468 ORTHO05D002806 3.4e-07 60.1 166 31.9
Lalb_Chr18g0054251 Lupinus albus HOM05D003468 ORTHO05D002806 5.8e-07 59.3 197 32.5
arahy.Tifrunner.gnm1.ann1.UJZR4Z Arachis hypogaea HOM05D003468 ORTHO05D002806 1.7e-06 57.8 194 29.9
Phvul.006G078200 Phaseolus vulgaris HOM05D003468 ORTHO05D002806 1.7e-06 57.8 179 33.0
Peaxi162Scf01078g00514 Petunia axillaris HOM05D003468 ORTHO05D002806 2.2e-06 57.4 187 26.2
TPR.G28801 Trifolium pratense HOM05D003468 ORTHO05D002806 2.2e-06 57.4 233 28.8
SalBow2G1693 Salvia bowleyana HOM05D003468 ORTHO05D002806 2.9e-06 57.0 171 29.8
TWI79G0734 Tripterygium wilfordii HOM05D003468 ORTHO05D002806 2.9e-06 57.0 149 31.5
Nn2g10321 Nelumbo nucifera HOM05D003468 ORTHO05D002806 3.8e-06 56.6 184 28.8
vmacro10619 Vaccinium macrocarpon HOM05D003468 ORTHO05D002806 3.8e-06 56.6 187 28.3
MELO3C026878.2 Cucumis melo HOM05D003468 ORTHO05D002806 4.9e-06 56.2 211 27.5
Lsat_1_v5_gn_9_13861 Lactuca sativa HOM05D003468 ORTHO05D002806 4.9e-06 56.2 149 33.6
PGR129G0007 Punica granatum HOM05D003468 ORTHO05D002806 6.4e-06 55.8 189 30.7


User provided reference genes

Program Settings