Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0220841 Rosa chinensis HOM05D007992 ORTHO05D010086 6.4e-34 146.7 69 100.0
FAN18G3190 Fragaria x ananassa HOM05D007992 ORTHO05D010086 1.8e-28 128.6 70 90.0
FAN04G0058 Fragaria x ananassa HOM05D007992 ORTHO05D010086 8.4e-26 119.8 59 93.2
Prupe.1G576700 Prunus persica HOM05D007992 ORTHO05D010086 1.3e-23 112.5 64 79.7
MD15G1432800 Malus domestica HOM05D007992 ORTHO05D010086 3.0e-23 111.3 69 76.8
QL02p099856 Quercus lobata HOM05D007992 ORTHO05D010086 5.1e-23 110.5 57 86.0
QL93p0310_0002 Quercus lobata HOM05D007992 ORTHO05D010086 5.1e-23 110.5 57 86.0
Phvul.003G074700 Phaseolus vulgaris HOM05D007992 ORTHO05D010086 6.6e-23 110.2 57 86.0
TWI59G0747 Tripterygium wilfordii HOM05D007992 ORTHO05D010086 8.6e-23 109.8 66 80.3
CiPaw.05G051500 Carya illinoinensis HOM05D007992 ORTHO05D010086 1.1e-22 109.4 58 82.8
Glyma.17G000900 Glycine max HOM05D007992 ORTHO05D010086 4.3e-22 107.5 57 84.2
Lj4g0012187 Lotus japonicus HOM05D007992 ORTHO05D010086 5.6e-22 107.1 58 84.5
arahy.Tifrunner.gnm1.ann1.5LAZ71 Arachis hypogaea HOM05D007992 ORTHO05D010086 1.2e-21 105.9 58 81.0
arahy.Tifrunner.gnm1.ann1.UKT1PL Arachis hypogaea HOM05D007992 ORTHO05D010086 1.2e-21 105.9 58 81.0
Potri.003G009800 Populus trichocarpa HOM05D007992 ORTHO05D010086 1.2e-21 105.9 58 84.5
GSVIVG01023280001 Vitis vinifera HOM05D007992 ORTHO05D010086 2.8e-21 104.8 62 75.8
Medtr4g134900 Medicago truncatula HOM05D007992 ORTHO05D010086 3.6e-21 104.4 61 75.4
Eucgr.I02752 Eucalyptus grandis HOM05D007992 ORTHO05D010086 8.1e-21 103.2 57 78.9
Manes.10G120300 Manihot esculenta HOM05D007992 ORTHO05D010086 8.1e-21 103.2 58 82.8
PGR142G0328 Punica granatum HOM05D007992 ORTHO05D010086 1.4e-20 102.4 58 79.3
CsaV3_3G019300 Cucumis sativus L. HOM05D007992 ORTHO05D010086 1.8e-20 102.1 58 77.6
Sed0016814 Sechium edule HOM05D007992 ORTHO05D010086 4.0e-20 100.9 57 77.2
CSS0028556 Camellia sinensis var. sinensis HOM05D007992 ORTHO05D010086 8.9e-20 99.8 58 79.3
MELO3C031671.2 Cucumis melo HOM05D007992 ORTHO05D010086 8.9e-20 99.8 58 77.6
Oeu045939.1 Olea europaea HOM05D007992 ORTHO05D010086 4.4e-19 97.4 58 75.9
THA.LOC104820254 Tarenaya hassleriana HOM05D007992 ORTHO05D010086 4.4e-19 97.4 58 72.4
DCAR_025353 Daucus carota HOM05D007992 ORTHO05D010086 5.8e-19 97.1 60 68.3
HanXRQChr07g0187511 Helianthus annuus HOM05D007992 ORTHO05D010086 5.8e-19 97.1 58 72.4
CAN.G798.45 Capsicum annuum HOM05D007992 ORTHO05D010086 7.6e-19 96.7 57 75.4
CANSAT54G2040 Cannabis sativa HOM05D007992 ORTHO05D010086 9.9e-19 96.3 64 68.8
Thhalv10009288m.g Eutrema salsugineum HOM05D007992 ORTHO05D010086 9.9e-19 96.3 58 74.1
Migut.B00791 Erythranthe guttata HOM05D007992 ORTHO05D010086 1.3e-18 95.9 58 72.4
AT1G09794 Arabidopsis thaliana HOM05D007992 ORTHO05D010086 2.2e-18 95.1 58 72.4
Carub.0001s0914 Capsella rubella HOM05D007992 ORTHO05D010086 2.2e-18 95.1 58 72.4
CARHR009770 Cardamine hirsuta HOM05D007992 ORTHO05D010086 2.2e-18 95.1 58 72.4
Lsat_1_v5_gn_7_79260 Lactuca sativa HOM05D007992 ORTHO05D010086 2.9e-18 94.7 58 72.4
C05p07870 Brassica napus HOM05D007992 ORTHO05D010086 4.9e-18 94.0 58 74.1
BolC5t29538H Brassica oleracea HOM05D007992 ORTHO05D010086 4.9e-18 94.0 58 74.1
PSO782G2589 Papaver somniferum HOM05D007992 ORTHO05D010086 4.9e-18 94.0 64 67.2
EL10Ac1g00780 Beta vulgaris HOM05D007992 ORTHO05D010086 6.4e-18 93.6 54 75.9
Peaxi162Scf00011g00937 Petunia axillaris HOM05D007992 ORTHO05D010086 6.4e-18 93.6 57 73.7
AUR62023424 Chenopodium quinoa HOM05D007992 ORTHO05D010086 8.4e-18 93.2 54 75.9
A06p06460 Brassica napus HOM05D007992 ORTHO05D010086 1.1e-17 92.8 58 72.4
BraA06t23857Z Brassica rapa HOM05D007992 ORTHO05D010086 1.1e-17 92.8 58 72.4
Cc02_g22280 Coffea canephora HOM05D007992 ORTHO05D010086 1.1e-17 92.8 62 66.1
Nitab4.5_0000948g0130 Nicotiana tabacum HOM05D007992 ORTHO05D010086 1.4e-17 92.4 57 71.9
Aa31LG1G5180 Aethionema arabicum HOM05D007992 ORTHO05D010086 4.2e-17 90.9 58 70.7
Nitab4.5_0002596g0010 Nicotiana tabacum HOM05D007992 ORTHO05D010086 4.2e-17 90.9 57 70.2
Zm00001eb138500 Zea mays HOM05D007992 ORTHO05D010086 4.2e-17 90.9 58 72.4
vmacro01727 Vaccinium macrocarpon HOM05D007992 ORTHO05D010086 5.4e-17 90.5 68 64.7
Os12g0182600 Oryza sativa ssp. japonica HOM05D007992 ORTHO05D010086 7.1e-17 90.1 66 68.2
SalBow7G0224 Salvia bowleyana HOM05D007992 ORTHO05D010086 2.1e-16 88.6 66 63.6
Nn5g27747 Nelumbo nucifera HOM05D007992 ORTHO05D010086 2.7e-16 88.2 62 71.0
Actinidia26161 Actinidia chinensis HOM05D000243 ORTHO05D010086 1.7e-15 85.5 45 84.4
Lalb_Chr13g0304491 Lupinus albus HOM05D007992 ORTHO05D010086 2.3e-15 85.1 65 63.1
CBR_g44919 Chara braunii HOM05D007992 ORTHO05D010086 6.6e-15 83.6 60 61.7
AagrBONN_evm.TU.Sc2ySwM_228.5013 Anthoceros agrestis HOM05D007992 ORTHO05D010086 1.5e-14 82.4 52 67.3
Aqoxy6G00119 Aquilegia oxysepala HOM05D007992 ORTHO05D010086 6.2e-13 77.0 64 57.8
MD08G1240200 Malus domestica HOM05D007992 ORTHO05D010086 1.1e-12 76.3 66 60.6
Pp3c6_8240 Physcomitrium patens HOM05D007992 ORTHO05D010086 6.9e-12 73.6 57 56.1
Sabra03G0005100 Salix brachista HOM05D007992 ORTHO05D010086 2.2e-10 68.6 37 81.1
SMO367G0246 Selaginella moellendorffii HOM05D007992 ORTHO05D010086 8.4e-10 66.6 57 49.1
Sp1g08390 Schrenkiella parvula HOM05D007992 ORTHO05D010086 1.4e-09 65.9 58 56.9
Rhsim11G0125500 Rhododendron simsii HOM05D007992 ORTHO05D010086 1.2e-08 62.8 32 81.2
TPR.G6015 Trifolium pratense HOM05D005420 ORTHO05D006524 1.6e-08 62.4 57 52.6
MBI09_g08443_MAGBIO Magnolia biondii HOM05D007992 ORTHO05D010086 2.3e-07 58.5 57 50.9
Gohir.D04G175400 Gossypium hirsutum HOM05D007992 ORTHO05D010086 3.0e-07 58.2 58 53.4
Gorai.012G166700 Gossypium raimondii HOM05D007992 ORTHO05D010086 3.0e-07 58.2 58 53.4
Thecc.02G025300 Theobroma cacao HOM05D007992 ORTHO05D010086 3.0e-07 58.2 58 53.4
Atru.chr6.758 Acer truncatum HOM05D007992 ORTHO05D010086 3.9e-07 57.8 58 51.7
Duzib132G0994 Durio zibethinus HOM05D007992 ORTHO05D010086 1.1e-06 56.2 58 51.7
CDE02G3423 Ceratophyllum demersum HOM05D007992 ORTHO05D010086 1.9e-06 55.5 33 69.7
Gohir.A04G130200 Gossypium hirsutum HOM05D007992 ORTHO05D010086 3.3e-06 54.7 58 50.0


User provided reference genes

Program Settings