Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0219841 Rosa chinensis HOM05D007222 ORTHO05D020701 2.1e-244 848.6 419 100.0
FAN08G3302 Fragaria x ananassa HOM05D007222 ORTHO05D020701 1.8e-147 526.6 419 63.7
FAN19G1742 Fragaria x ananassa HOM05D007222 ORTHO05D020701 1.2e-135 487.3 341 69.8
FAN18G3680 Fragaria x ananassa HOM05D007222 ORTHO05D020701 4.2e-112 409.1 344 62.5
FvH4_5g25390 Fragaria vesca HOM05D007222 ORTHO05D020701 8.0e-87 325.1 200 74.0
RcHm_v2.0_Chr7g0205711 Rosa chinensis HOM05D007222 ORTHO05D020701 9.5e-56 221.9 356 40.4
RcHm_v2.0_Chr4g0388551 Rosa chinensis HOM05D007222 ORTHO05D010132 7.0e-51 205.7 353 37.7
FAN13G2243 Fragaria x ananassa HOM05D007222 ORTHO05D020701 2.6e-45 187.2 208 53.8
Prupe.5G179400 Prunus persica HOM05D007222 ORTHO05D010132 4.4e-37 159.8 360 33.6
Prupe.5G216900 Prunus persica HOM05D007222 ORTHO05D010132 2.4e-35 154.1 350 34.0
MD06G1179300 Malus domestica HOM05D007222 ORTHO05D010132 2.7e-34 150.6 289 33.2
Prupe.7G215500 Prunus persica HOM05D007222 ORTHO05D010132 1.3e-33 148.3 338 34.3
Prupe.5G196600 Prunus persica HOM05D007222 ORTHO05D010132 3.0e-33 147.1 350 32.6
Prupe.5G196700 Prunus persica HOM05D007222 ORTHO05D010132 3.0e-33 147.1 352 33.0
MD06G1179400 Malus domestica HOM05D007222 ORTHO05D010132 1.1e-32 145.2 366 30.6
RcHm_v2.0_Chr7g0179991 Rosa chinensis HOM05D007222 ORTHO05D019190 3.3e-32 143.7 270 33.7
Prupe.8G014700 Prunus persica HOM05D007222 ORTHO05D010132 7.3e-32 142.5 348 30.7
Prupe.2G232100 Prunus persica HOM05D007222 ORTHO05D010132 1.2e-29 135.2 341 30.5
Prupe.5G190500 Prunus persica HOM05D007222 ORTHO05D010132 2.6e-29 134.0 345 31.3
Prupe.5G196800 Prunus persica HOM05D007222 ORTHO05D010132 1.3e-28 131.7 261 36.4
FvH4_7g13450 Fragaria vesca HOM05D007222 ORTHO05D010132 3.8e-28 130.2 350 32.3
FvH4_5g16160 Fragaria vesca HOM05D007222 ORTHO05D019190 8.4e-28 129.0 355 27.6
FAN18G1328 Fragaria x ananassa HOM05D007222 ORTHO05D029649 1.1e-27 128.6 266 36.8
FvH4_7g27660 Fragaria vesca HOM05D007222 ORTHO05D010132 1.4e-27 128.3 366 31.7
Prupe.I003600 Prunus persica HOM05D007222 ORTHO05D010132 1.4e-27 128.3 360 29.2
FAN18G1099 Fragaria x ananassa HOM05D007222 ORTHO05D019190 2.4e-27 127.5 355 27.3
Prupe.7G215400 Prunus persica HOM05D007222 ORTHO05D010132 3.2e-27 127.1 298 33.2
FAN01G2879 Fragaria x ananassa HOM05D000202 ORTHO05D010132 5.4e-27 126.3 357 31.9
FvH4_5g02900 Fragaria vesca HOM05D007222 ORTHO05D029649 7.1e-27 125.9 266 36.1
Prupe.5G190300 Prunus persica HOM05D007222 ORTHO05D010132 1.2e-26 125.2 357 30.0
FAN06G0811 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.1e-26 124.4 379 31.1
FvH4_7g27710 Fragaria vesca HOM05D007222 ORTHO05D010132 2.7e-26 124.0 366 30.6
FAN03G1025 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.7e-26 124.0 366 30.9
MD06G1178900 Malus domestica HOM05D007222 ORTHO05D010132 2.7e-26 124.0 241 34.4
Prupe.3G220200 Prunus persica HOM05D007222 ORTHO05D036617 2.7e-26 124.0 264 36.0
Prupe.3G221000 Prunus persica HOM05D007222 ORTHO05D036617 2.7e-26 124.0 264 36.0
FAN06G1439 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.5e-26 123.6 356 30.1
FAN06G2615 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.6e-26 123.2 357 30.5
FAN06G5048 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.6e-26 123.2 351 31.1
FAN06G2272 Fragaria x ananassa HOM05D007222 ORTHO05D010132 6.0e-26 122.9 357 30.5
Prupe.5G196500 Prunus persica HOM05D007222 ORTHO05D010132 6.0e-26 122.9 349 31.5
FvH4_7g27631 Fragaria vesca HOM05D007222 ORTHO05D010132 7.8e-26 122.5 357 30.8
RcHm_v2.0_Chr1g0379111 Rosa chinensis HOM05D007222 ORTHO05D010132 1.0e-25 122.1 379 31.4
FvH4_7g27720 Fragaria vesca HOM05D007222 ORTHO05D010132 1.7e-25 121.3 356 30.6
FAN06G2815 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.7e-25 121.3 354 29.9
FAN10G3229 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.7e-25 121.3 356 30.1
FvH4_7g27670 Fragaria vesca HOM05D007222 ORTHO05D010132 3.0e-25 120.6 356 30.3
Prupe.5G190600 Prunus persica HOM05D007222 ORTHO05D010132 3.9e-25 120.2 344 31.7
FAN06G0677 Fragaria x ananassa HOM05D007222 ORTHO05D010132 8.7e-25 119.0 357 31.1
FAN06G2032 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.5e-24 118.2 344 31.4
FAN10G0676 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.5e-24 118.2 357 30.3
Prupe.3G199800 Prunus persica HOM05D007222 ORTHO05D010132 1.5e-24 118.2 347 30.3
FAN13G2764 Fragaria x ananassa HOM05D007222 ORTHO05D029649 1.9e-24 117.9 258 35.3
RcHm_v2.0_Chr1g0378721 Rosa chinensis HOM05D007222 ORTHO05D010132 7.3e-24 115.9 377 29.4
RcHm_v2.0_Chr1g0379031 Rosa chinensis HOM05D007222 ORTHO05D010132 7.3e-24 115.9 377 29.4
MD17G1269500 Malus domestica HOM05D007222 ORTHO05D036617 9.6e-24 115.5 351 30.5
RcHm_v2.0_Chr1g0379231 Rosa chinensis HOM05D007222 ORTHO05D010132 9.6e-24 115.5 375 29.3
RcHm_v2.0_Chr1g0379381 Rosa chinensis HOM05D007222 ORTHO05D010132 9.6e-24 115.5 375 29.3
FAN18G1465 Fragaria x ananassa HOM05D007222 ORTHO05D035251 2.1e-23 114.4 377 30.0
Prupe.3G199700 Prunus persica HOM05D007222 ORTHO05D010132 1.8e-22 111.3 348 30.2
Prupe.5G196400 Prunus persica HOM05D007222 ORTHO05D010132 9.0e-22 109.0 287 30.0
FvH4_5g02920 Fragaria vesca HOM05D007222 ORTHO05D046396 1.2e-21 108.6 272 32.7
FAN18G3407 Fragaria x ananassa HOM05D007222 ORTHO05D046396 3.4e-21 107.1 272 32.7
FAN08G2897 Fragaria x ananassa HOM05D007222 ORTHO05D029649 5.8e-21 106.3 248 33.5
FAN03G0079 Fragaria x ananassa HOM05D001548 ORTHO05D003901 3.2e-19 100.5 323 29.4
FAN03G0896 Fragaria x ananassa HOM05D007222 ORTHO05D010132 9.3e-19 99.0 383 30.3
FAN06G4891 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.6e-18 98.2 223 30.9
FAN01G0578 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.7e-18 97.4 285 30.9
FAN06G2198 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.4e-14 84.3 258 30.2
FvH4_5g15971 Fragaria vesca HOM05D007222 ORTHO05D035251 4.5e-13 80.1 342 27.5
FAN03G0246 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.9e-11 74.7 181 30.9
Prupe.5G121900 Prunus persica HOM05D007222 ORTHO05D010132 2.1e-10 71.2 182 29.1
FvH4_5g15972 Fragaria vesca HOM05D007222 ORTHO05D035251 2.7e-10 70.9 167 31.7
MD14G1191600 Malus domestica HOM05D007222 ORTHO05D048640 7.9e-10 69.3 159 30.8
RcHm_v2.0_Chr2g0100421 Rosa chinensis HOM05D013290 ORTHO05D016295 1.8e-09 68.2 343 25.1
RcHm_v2.0_Chr7g0180241 Rosa chinensis HOM05D000007 ORTHO05D019190 5.1e-09 66.6 153 34.6
MD14G1191500 Malus domestica HOM05D007222 ORTHO05D048640 1.5e-08 65.1 131 34.4
Prupe.5G149900 Prunus persica HOM05D007222 ORTHO05D010132 4.3e-08 63.5 132 37.1
FAN10G3128 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.4e-06 58.5 146 33.6
MD16G1080700 Malus domestica HOM05D007222 ORTHO05D010132 2.4e-06 57.8 87 41.4


User provided reference genes

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