Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0217881 Rosa chinensis HOM05D001457 ORTHO05D001477 4.7e-16 86.7 41 100.0
RcHm_v2.0_Chr7g0217891 Rosa chinensis HOM05D001457 ORTHO05D001477 3.5e-11 70.5 33 97.0
RcHm_v2.0_Chr3g0462021 Rosa chinensis HOM05D001457 ORTHO05D001477 7.7e-11 69.3 33 93.9
FAN14G3075 Fragaria x ananassa HOM05D000053 ORTHO05D000448 1.0e-10 68.9 40 77.5
RcHm_v2.0_Chr3g0461911 Rosa chinensis HOM05D001457 ORTHO05D001477 2.2e-10 67.8 33 90.9
FAN02G4430 Fragaria x ananassa HOM05D001457 ORTHO05D001477 5.5e-09 63.2 32 87.5
RcHm_v2.0_Chr7g0217931 Rosa chinensis HOM05D001457 ORTHO05D001477 5.5e-09 63.2 31 93.5
FvH4_6g03570 Fragaria vesca HOM05D001457 ORTHO05D001477 9.4e-09 62.4 40 70.0
FAN05G0509 Fragaria x ananassa HOM05D000053 ORTHO05D000448 9.4e-09 62.4 40 72.5
FAN14G5060 Fragaria x ananassa HOM05D001457 ORTHO05D001477 1.2e-08 62.0 33 84.8
FAN14G4869 Fragaria x ananassa HOM05D001457 ORTHO05D001477 2.3e-07 57.8 40 65.0
MD12G1177700 Malus domestica HOM05D001457 ORTHO05D001477 8.8e-07 55.8 33 75.8


User provided reference genes

Program Settings