Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 6.4e-51 203.8 101 100.0
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 2.7e-49 198.4 101 95.0
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.7e-49 198.4 101 95.0
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.7e-49 198.4 101 95.0
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.3e-48 195.3 101 94.1
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 6.0e-41 170.6 101 85.1
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 7.9e-41 170.2 101 83.2
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 7.9e-41 170.2 101 81.2
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 1.0e-40 169.9 101 80.2
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 3.9e-40 167.9 94 87.2
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 5.1e-40 167.5 101 81.2
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 6.7e-40 167.2 101 82.2
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 6.7e-40 167.2 100 81.0
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 8.7e-40 166.8 101 82.2
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 1.9e-39 165.6 101 81.2
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 2.5e-39 165.2 100 81.0
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 3.3e-39 164.9 100 81.0
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 7.4e-39 163.7 99 81.8
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 7.4e-39 163.7 99 80.8
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 7.4e-39 163.7 101 80.2
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.3e-38 162.9 99 80.8
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 1.6e-38 162.5 99 80.8
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 3.7e-38 161.4 101 78.2
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 4.8e-38 161.0 101 75.2
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 6.3e-38 160.6 101 76.2
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 1.4e-37 159.5 101 77.2
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 5.3e-37 157.5 101 76.2
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 6.9e-37 157.1 103 75.7
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 1.2e-36 156.4 101 74.3
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 1.2e-36 156.4 101 74.3
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 1.5e-36 156.0 103 74.8
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 1.5e-36 156.0 97 76.3
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 1.5e-36 156.0 102 75.5
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 2.0e-36 155.6 94 80.9
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 2.6e-36 155.2 103 74.8
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 4.5e-36 154.5 101 75.2
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 5.9e-36 154.1 101 72.3
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 5.9e-36 154.1 94 77.7
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 7.6e-36 153.7 100 75.0
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 1.3e-35 152.9 101 71.3
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 1.7e-35 152.5 96 76.0
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 2.9e-35 151.8 100 73.0
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 3.8e-35 151.4 98 71.4
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 5.0e-35 151.0 99 74.7
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 6.5e-35 150.6 104 77.9
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 6.5e-35 150.6 98 76.5
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 6.5e-35 150.6 98 76.5
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 6.5e-35 150.6 98 76.5
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 6.5e-35 150.6 93 77.4
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 6.5e-35 150.6 99 73.7
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 1.1e-34 149.8 95 74.7
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 1.1e-34 149.8 103 70.9
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 1.4e-34 149.4 101 71.3
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 1.4e-34 149.4 98 74.5
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 2.5e-34 148.7 95 73.7
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 3.2e-34 148.3 100 71.0
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 3.2e-34 148.3 100 73.0
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 3.2e-34 148.3 101 69.3
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 4.2e-34 147.9 99 71.7
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 4.2e-34 147.9 100 73.0
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 4.2e-34 147.9 99 73.7
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 4.2e-34 147.9 99 72.7
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 5.5e-34 147.5 99 72.7
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 7.2e-34 147.1 95 71.6
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 7.2e-34 147.1 98 70.4
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 1.2e-33 146.4 100 71.0
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 1.2e-33 146.4 101 75.2
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 1.2e-33 146.4 97 72.2
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 1.2e-33 146.4 99 69.7
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 1.6e-33 146.0 101 68.3
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 1.6e-33 146.0 99 72.7
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 1.6e-33 146.0 94 72.3
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 2.1e-33 145.6 99 72.7
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 2.7e-33 145.2 101 68.3
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 2.7e-33 145.2 101 68.3
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 3.5e-33 144.8 97 72.2
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 6.1e-33 144.1 100 71.0
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 7.9e-33 143.7 101 68.3
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 7.9e-33 143.7 101 68.3
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 7.9e-33 143.7 101 68.3
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 7.9e-33 143.7 101 68.3
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 7.9e-33 143.7 102 68.6
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 1.0e-32 143.3 128 61.7
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 1.8e-32 142.5 101 67.3
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 3.9e-32 141.4 101 67.3
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 1.1e-31 139.8 97 69.1
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 1.9e-31 139.0 104 67.3
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 9.7e-31 136.7 90 74.4
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 2.2e-30 135.6 83 77.1
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 2.2e-30 135.6 98 71.4
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 3.7e-30 134.8 83 80.7
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 4.8e-30 134.4 83 77.1
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 6.3e-30 134.0 102 64.7
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 1.1e-29 133.3 102 63.7
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 1.1e-29 133.3 93 66.7
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 1.1e-29 133.3 103 68.0
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 1.4e-29 132.9 102 63.7
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 1.8e-29 132.5 86 74.4
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 2.4e-29 132.1 102 63.7
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 2.4e-29 132.1 102 63.7
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 3.1e-29 131.7 86 67.4
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 2.2e-27 125.6 81 74.1
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 2.2e-27 125.6 87 66.7
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 4.2e-26 121.3 81 70.4
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 5.1e-24 114.4 84 66.7
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 1.1e-23 113.2 66 84.8
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 2.8e-22 108.6 93 61.3
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 2.2e-19 99.0 82 57.3
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 5.0e-19 97.8 62 69.4
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 6.1e-17 90.9 97 48.5
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 1.0e-16 90.1 82 51.2
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 5.7e-15 84.3 118 44.1
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 1.2e-12 76.6 66 59.1
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 3.5e-12 75.1 47 70.2
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 1.0e-11 73.6 82 51.2
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 2.9e-11 72.0 67 55.2
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 2.7e-09 65.5 38 73.7
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 1.3e-06 56.6 43 58.1
AUR62035175 Chenopodium quinoa HOM05D006709 ORTHO05D008329 2.8e-06 55.5 39 71.8


User provided reference genes

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