Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0216651 Rosa chinensis HOM05D006243 ORTHO05D007688 9.4e-34 146.4 78 100.0
Haze_14258 Corylus avellana HOM05D006243 ORTHO05D007688 2.3e-32 141.7 77 96.1
RcHm_v2.0_Chr3g0493131 Rosa chinensis HOM05D006243 ORTHO05D007688 2.3e-32 141.7 77 96.1
Cfa007817 Carpinus fangiana HOM05D006243 ORTHO05D007688 6.8e-32 140.2 77 94.8
TWI53G0799 Tripterygium wilfordii HOM05D006243 ORTHO05D007688 6.8e-32 140.2 77 94.8
Atru.chr1.1900 Acer truncatum HOM05D006243 ORTHO05D007688 8.8e-32 139.8 77 93.5
CSS0038083 Camellia sinensis var. sinensis HOM05D006243 ORTHO05D007688 8.8e-32 139.8 77 93.5
GSVIVG01030779001 Vitis vinifera HOM05D006243 ORTHO05D007688 8.8e-32 139.8 77 93.5
Os05g0148700 Oryza sativa ssp. japonica HOM05D006243 ORTHO05D007688 1.5e-31 139.0 77 92.2
Prupe.3G161300 Prunus persica HOM05D006243 ORTHO05D007688 1.5e-31 139.0 77 93.5
Hund13108 Selenicereus undatus HOM05D006243 ORTHO05D007688 1.5e-31 139.0 77 93.5
Ah.10g032360 Amaranthus hybridus HOM05D006243 ORTHO05D007688 2.0e-31 138.7 77 92.2
Manes.01G117900 Manihot esculenta HOM05D006243 ORTHO05D007688 2.0e-31 138.7 77 93.5
Sabra17G0107600 Salix brachista HOM05D006243 ORTHO05D007688 2.0e-31 138.7 77 92.2
TAR629G1693 Trochodendron aralioides HOM05D006243 ORTHO05D007688 2.0e-31 138.7 77 93.5
EL10Ac2g03168 Beta vulgaris HOM05D006243 ORTHO05D007688 2.6e-31 138.3 77 93.5
Rhsim10G0177000 Rhododendron simsii HOM05D006243 ORTHO05D007688 2.6e-31 138.3 77 92.2
Solyc11g011170.2 Solanum lycopersicum HOM05D006243 ORTHO05D007688 2.6e-31 138.3 77 92.2
Sopen11g005930 Solanum pennellii HOM05D006243 ORTHO05D007688 2.6e-31 138.3 77 92.2
AUR62018213 Chenopodium quinoa HOM05D006243 ORTHO05D007688 3.4e-31 137.9 77 93.5
AUR62038703 Chenopodium quinoa HOM05D006243 ORTHO05D007688 3.4e-31 137.9 77 93.5
THA.LOC104805617 Tarenaya hassleriana HOM05D006243 ORTHO05D007688 3.4e-31 137.9 77 94.8
Actinidia06497 Actinidia chinensis HOM05D006243 ORTHO05D007688 4.4e-31 137.5 77 90.9
CAN.G222.23 Capsicum annuum HOM05D006243 ORTHO05D007688 5.7e-31 137.1 77 90.9
CARHR058210 Cardamine hirsuta HOM05D006243 ORTHO05D007688 5.7e-31 137.1 77 92.2
CiPaw.03G071500 Carya illinoinensis HOM05D006243 ORTHO05D007688 5.7e-31 137.1 77 92.2
Ciclev10011587m.g Citrus clementina HOM05D006243 ORTHO05D007688 5.7e-31 137.1 77 92.2
COL.COLO4_10159 Corchorus olitorius HOM05D006243 ORTHO05D007688 5.7e-31 137.1 77 92.2
FvH4_1g28740 Fragaria vesca HOM05D006243 ORTHO05D007688 5.7e-31 137.1 77 92.2
FAN19G0552 Fragaria x ananassa HOM05D006243 ORTHO05D007688 5.7e-31 137.1 77 92.2
Potri.017G129100 Populus trichocarpa HOM05D006243 ORTHO05D007688 5.7e-31 137.1 77 90.9
PGR004G2672 Punica granatum HOM05D006243 ORTHO05D007688 5.7e-31 137.1 77 92.2
PGSC0003DMG402015686 Solanum tuberosum HOM05D006243 ORTHO05D007688 5.7e-31 137.1 77 90.9
vmacro07692 Vaccinium macrocarpon HOM05D006243 ORTHO05D007688 5.7e-31 137.1 77 90.9
AT1G66330 Arabidopsis thaliana HOM05D006243 ORTHO05D007688 7.5e-31 136.7 77 90.9
BcaB03g15275 Brassica carinata HOM05D006243 ORTHO05D007688 7.5e-31 136.7 77 90.9
BcaB05g24167 Brassica carinata HOM05D006243 ORTHO05D007688 7.5e-31 136.7 77 90.9
BcaC03g14742 Brassica carinata HOM05D006243 ORTHO05D007688 7.5e-31 136.7 77 90.9
A02p13590 Brassica napus HOM05D006243 ORTHO05D007688 7.5e-31 136.7 77 90.9
C02p21930 Brassica napus HOM05D006243 ORTHO05D007688 7.5e-31 136.7 77 90.9
BolC2t08324H Brassica oleracea HOM05D006243 ORTHO05D007688 7.5e-31 136.7 77 90.9
BraA02t06418Z Brassica rapa HOM05D006243 ORTHO05D007688 7.5e-31 136.7 77 90.9
Carub.0002s1234 Capsella rubella HOM05D006243 ORTHO05D007688 7.5e-31 136.7 77 90.9
Cpa.g.sc67.47 Carica papaya HOM05D006243 ORTHO05D007688 7.5e-31 136.7 77 90.9
MD09G1263800 Malus domestica HOM05D006243 ORTHO05D007688 7.5e-31 136.7 77 92.2
MD17G1258600 Malus domestica HOM05D006243 ORTHO05D007688 7.5e-31 136.7 77 92.2
MD17G1259100 Malus domestica HOM05D006243 ORTHO05D007688 7.5e-31 136.7 77 92.2
Sc10g0004760 Simmondsia chinensis HOM05D006243 ORTHO05D007688 7.5e-31 136.7 77 90.9
ClCG05G011500 Citrullus lanatus HOM05D006243 ORTHO05D007688 9.8e-31 136.3 77 93.5
CsaV3_3G020810 Cucumis sativus L. HOM05D006243 ORTHO05D007688 9.8e-31 136.3 77 93.5
Nn4g24254 Nelumbo nucifera HOM05D006243 ORTHO05D007688 9.8e-31 136.3 77 90.9
Sp5g21350 Schrenkiella parvula HOM05D006243 ORTHO05D007688 9.8e-31 136.3 77 90.9
Thecc.04G115200 Theobroma cacao HOM05D006243 ORTHO05D007688 9.8e-31 136.3 77 92.2
CANSAT64G2718 Cannabis sativa HOM05D006243 ORTHO05D007688 1.3e-30 136.0 77 90.9
Gohir.A07G078300 Gossypium hirsutum HOM05D006243 ORTHO05D007688 1.3e-30 136.0 77 90.9
Gorai.001G088700 Gossypium raimondii HOM05D006243 ORTHO05D007688 1.3e-30 136.0 77 90.9
Duzib133G1335 Durio zibethinus HOM05D006243 ORTHO05D007688 1.7e-30 135.6 77 90.9
FAN26G0580 Fragaria x ananassa HOM05D006243 ORTHO05D007688 1.7e-30 135.6 77 90.9
FAN28G0309 Fragaria x ananassa HOM05D006243 ORTHO05D007688 1.7e-30 135.6 77 90.9
Oeu012257.1 Olea europaea HOM05D006243 ORTHO05D007688 1.7e-30 135.6 77 89.6
Aa31LG2G3000 Aethionema arabicum HOM05D006243 ORTHO05D007688 2.2e-30 135.2 77 90.9
LjContig00141g0011202 Lotus japonicus HOM05D006243 ORTHO05D007688 2.2e-30 135.2 77 90.9
Lalb_Chr17g0346141 Lupinus albus HOM05D006243 ORTHO05D007688 2.2e-30 135.2 77 90.9
Oeu032326.2 Olea europaea HOM05D006243 ORTHO05D007688 2.8e-30 134.8 77 89.6
unitig_736.g22596 Utricularia gibba HOM05D006243 ORTHO05D007688 2.8e-30 134.8 77 89.6
AL2G24050 Arabidopsis lyrata HOM05D006243 ORTHO05D007688 3.7e-30 134.4 77 89.6
MELO3C020192.2 Cucumis melo HOM05D006243 ORTHO05D007688 3.7e-30 134.4 77 92.2
ECA246G3278 Erigeron canadensis HOM05D006243 ORTHO05D007688 3.7e-30 134.4 77 88.3
Glyma.02G245300 Glycine max HOM05D006243 ORTHO05D007688 3.7e-30 134.4 77 89.6
Glyma.14G215400 Glycine max HOM05D006243 ORTHO05D007688 3.7e-30 134.4 77 89.6
Lsat_1_v5_gn_3_64500 Lactuca sativa HOM05D006243 ORTHO05D007688 3.7e-30 134.4 77 88.3
Aqoxy3G00051 Aquilegia oxysepala HOM05D006243 ORTHO05D007688 4.8e-30 134.0 77 88.3
Zm00001eb165460 Zea mays HOM05D006243 ORTHO05D007688 4.8e-30 134.0 77 88.3
Gohir.D07G083100 Gossypium hirsutum HOM05D006243 ORTHO05D007688 6.3e-30 133.7 77 89.6
Lalb_Chr10g0104381 Lupinus albus HOM05D006243 ORTHO05D007688 6.3e-30 133.7 77 89.6
Eucgr.J01597 Eucalyptus grandis HOM05D006243 ORTHO05D007688 8.3e-30 133.3 77 88.3
Lj4A263G87 Lonicera japonica HOM05D006243 ORTHO05D007688 8.3e-30 133.3 77 88.3
Peaxi162Scf00305g00613 Petunia axillaris HOM05D006243 ORTHO05D007688 8.3e-30 133.3 77 88.3
Phvul.008G235800 Phaseolus vulgaris HOM05D006243 ORTHO05D007688 8.3e-30 133.3 77 89.6
Actinidia17213 Actinidia chinensis HOM05D006243 ORTHO05D007688 1.1e-29 132.9 78 89.7
Ca_05826_v3 Cicer arietinum L. HOM05D006243 ORTHO05D007688 1.1e-29 132.9 77 89.6
Medtr5g078290 Medicago truncatula HOM05D006243 ORTHO05D007688 1.1e-29 132.9 77 89.6
PSO017G3733 Papaver somniferum HOM05D006243 ORTHO05D007688 1.1e-29 132.9 77 89.6
VMungo0647G1521 Vigna mungo HOM05D006243 ORTHO05D007688 1.1e-29 132.9 77 89.6
arahy.Tifrunner.gnm1.ann1.SFD8TD Arachis hypogaea HOM05D006243 ORTHO05D007688 1.4e-29 132.5 77 89.6
arahy.Tifrunner.gnm1.ann1.Y3W4B5 Arachis hypogaea HOM05D006243 ORTHO05D007688 1.4e-29 132.5 77 89.6
PSO478G0940 Papaver somniferum HOM05D006243 ORTHO05D007688 2.4e-29 131.7 77 88.3
CDE04G1800 Ceratophyllum demersum HOM05D006243 ORTHO05D007688 4.1e-29 131.0 77 87.0
HanXRQChr13g0418351 Helianthus annuus HOM05D006243 ORTHO05D007688 4.1e-29 131.0 77 85.7
TPR.G8275 Trifolium pratense HOM05D006243 ORTHO05D007688 4.1e-29 131.0 77 88.3
Migut.H02264 Erythranthe guttata HOM05D006243 ORTHO05D007688 5.4e-29 130.6 77 85.7
BcaC08g46068 Brassica carinata HOM05D006243 ORTHO05D007688 9.1e-29 129.8 78 88.5
A07p33290 Brassica napus HOM05D006243 ORTHO05D007688 9.1e-29 129.8 78 88.5
C06p39620 Brassica napus HOM05D006243 ORTHO05D007688 9.1e-29 129.8 78 88.5
BolC6t39055H Brassica oleracea HOM05D006243 ORTHO05D007688 9.1e-29 129.8 78 88.5
BraA07t30960Z Brassica rapa HOM05D006243 ORTHO05D007688 9.1e-29 129.8 78 88.5
Cc07_g13520 Coffea canephora HOM05D006243 ORTHO05D007688 9.1e-29 129.8 77 85.7
DCAR_014173 Daucus carota HOM05D006243 ORTHO05D007688 9.1e-29 129.8 77 84.4
SalBow3G2874 Salvia bowleyana HOM05D006243 ORTHO05D007688 1.2e-28 129.4 77 85.7
HPP92_027416 Vanilla planifolia HOM05D006243 ORTHO05D007688 1.2e-28 129.4 77 87.0
ATR0317G069 Amborella trichopoda HOM05D006243 ORTHO05D007688 3.5e-28 127.9 77 83.1
SEGI_26344 Sequoiadendron giganteum HOM05D006243 ORTHO05D007688 4.5e-28 127.5 77 83.1
MSTRG.23392 Avicennia marina HOM05D006243 ORTHO05D007688 1.7e-27 125.6 77 84.4
Lsat_1_v5_gn_2_20381 Lactuca sativa HOM05D006243 ORTHO05D007688 2.2e-22 108.6 77 74.0
SGA_v2.0_scaffold108G30955 Striga asiatica HOM05D006243 ORTHO05D007688 4.9e-22 107.5 77 77.9
Nitab4.5_0000201g0240 Nicotiana tabacum HOM05D006243 ORTHO05D007688 1.8e-21 105.5 60 90.0
Nitab4.5_0009518g0020 Nicotiana tabacum HOM05D006243 ORTHO05D007688 1.8e-21 105.5 60 90.0
Mapoly0055s0114 Marchantia polymorpha HOM05D006243 ORTHO05D007688 2.0e-20 102.1 77 61.0
Thhalv10018612m.g Eutrema salsugineum HOM05D006243 ORTHO05D007688 8.6e-19 96.7 53 90.6
AagrBONN_evm.TU.Sc2ySwM_117.2468 Anthoceros agrestis HOM05D006243 ORTHO05D007688 4.2e-18 94.4 77 58.4
Sed0013436 Sechium edule HOM05D006243 ORTHO05D007688 7.2e-18 93.6 55 87.3
Pp3c5_8230 Physcomitrium patens HOM05D006243 ORTHO05D007688 2.1e-17 92.0 77 59.7
CBR_g27960 Chara braunii HOM05D006243 ORTHO05D007688 2.8e-17 91.7 77 58.4
Lsat_1_v5_gn_9_50281 Lactuca sativa HOM05D006243 ORTHO05D007688 2.8e-17 91.7 53 83.0
Pp3c16_1710 Physcomitrium patens HOM05D006243 ORTHO05D007688 4.7e-17 90.9 77 57.1
Pp3c25_7980 Physcomitrium patens HOM05D006243 ORTHO05D007688 4.7e-17 90.9 77 58.4
Lsat_1_v5_gn_9_64341 Lactuca sativa HOM05D000326 ORTHO05D000312 1.1e-10 69.7 102 46.1
SMO238G0021 Selaginella moellendorffii HOM05D006243 ORTHO05D007688 7.3e-10 67.0 100 42.0


User provided reference genes

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