Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0216401 Rosa chinensis HOM05D006287 ORTHO05D008192 3.7e-82 308.1 156 100.0
RcHm_v2.0_Chr4g0410561 Rosa chinensis HOM05D006287 ORTHO05D008192 1.6e-24 116.7 127 60.6
FAN08G1130 Fragaria x ananassa HOM05D006287 ORTHO05D008192 2.1e-16 89.7 70 71.4
MD12G1164900 Malus domestica HOM05D006287 ORTHO05D008192 8.0e-16 87.8 123 45.5
CiPaw.06G059600 Carya illinoinensis HOM05D006287 ORTHO05D008192 3.7e-13 79.0 133 42.1
Thecc.09G149000 Theobroma cacao HOM05D006287 ORTHO05D008192 1.4e-12 77.0 158 34.2
Sc25g0000480 Simmondsia chinensis HOM05D006287 ORTHO05D008192 3.1e-12 75.9 97 43.3
Gohir.D10G088500 Gossypium hirsutum HOM05D006287 ORTHO05D008192 7.7e-11 71.2 129 37.2
CSS0042508 Camellia sinensis var. sinensis HOM05D006287 ORTHO05D008192 2.9e-10 69.3 132 36.4
Manes.03G017400 Manihot esculenta HOM05D006287 ORTHO05D008192 6.5e-10 68.2 95 41.1
Gohir.A10G099700 Gossypium hirsutum HOM05D006287 ORTHO05D008192 1.5e-09 67.0 68 50.0
Oeu008766.1 Olea europaea HOM05D006287 ORTHO05D008192 4.0e-07 58.9 83 39.8
Atru.chr7.2375 Acer truncatum HOM05D006287 ORTHO05D008192 5.2e-07 58.5 130 33.1
MSTRG.25851 Avicennia marina HOM05D006287 ORTHO05D008192 2.0e-06 56.6 92 39.1
Migut.A00317 Erythranthe guttata HOM05D006287 ORTHO05D008192 7.5e-06 54.7 62 43.5
AUR62021186 Chenopodium quinoa HOM05D006287 ORTHO05D008192 9.7e-06 54.3 83 37.3


User provided reference genes

Program Settings