Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0212851 Rosa chinensis HOM05D005120 ORTHO05D006174 8.0e-286 986.5 528 100.0
FAN18G1216 Fragaria x ananassa HOM05D005120 ORTHO05D006174 1.1e-263 912.9 529 92.6
FAN08G2640 Fragaria x ananassa HOM05D005120 ORTHO05D006174 3.3e-263 911.4 529 92.4
FvH4_5g23540 Fragaria vesca HOM05D005120 ORTHO05D006174 7.3e-263 910.2 529 92.2
FAN18G2593 Fragaria x ananassa HOM05D005120 ORTHO05D006174 2.1e-262 908.7 529 92.2
FAN04G0205 Fragaria x ananassa HOM05D005120 ORTHO05D006174 4.7e-262 907.5 530 92.1
Prupe.5G024500 Prunus persica HOM05D005120 ORTHO05D006174 9.6e-231 803.5 526 83.5
MD06G1023600 Malus domestica HOM05D005120 ORTHO05D006174 8.4e-227 790.4 526 81.0
CANSAT21G0750 Cannabis sativa HOM05D005120 ORTHO05D006174 1.2e-212 743.4 529 77.1
Cfa012552 Carpinus fangiana HOM05D005120 ORTHO05D006174 4.6e-209 731.5 528 76.3
Duzib205G1724 Durio zibethinus HOM05D005120 ORTHO05D006174 1.5e-207 726.5 532 74.6
CiPaw.11G101100 Carya illinoinensis HOM05D005120 ORTHO05D006174 4.8e-206 721.5 504 77.2
Eucgr.E01259 Eucalyptus grandis HOM05D005120 ORTHO05D006174 6.9e-205 717.6 456 83.1
Sabra03G0067700 Salix brachista HOM05D005120 ORTHO05D006174 3.4e-204 715.3 462 82.5
Potri.003G099600 Populus trichocarpa HOM05D005120 ORTHO05D006174 1.0e-203 713.8 515 75.5
QL12p000342 Quercus lobata HOM05D005120 ORTHO05D006174 1.3e-203 713.4 450 83.6
Haze_08107 Corylus avellana HOM05D005120 ORTHO05D006174 8.5e-203 710.7 582 69.9
Lj4g0011317 Lotus japonicus HOM05D005120 ORTHO05D006174 1.1e-202 710.3 483 78.7
Thecc.03G314000 Theobroma cacao HOM05D005120 ORTHO05D006174 2.7e-201 705.7 535 72.9
Manes.17G006500 Manihot esculenta HOM05D005120 ORTHO05D006174 7.9e-201 704.1 484 78.3
PGR042G0860 Punica granatum HOM05D005120 ORTHO05D006174 5.7e-199 698.0 486 78.0
Gorai.003G186700 Gossypium raimondii HOM05D005120 ORTHO05D006174 7.4e-199 697.6 457 80.5
CARHR031430 Cardamine hirsuta HOM05D005120 ORTHO05D006174 2.2e-198 696.0 455 81.1
Cpa.g.sc757.1 Carica papaya HOM05D005120 ORTHO05D006174 2.2e-198 696.0 512 74.4
Gohir.D03G177466 Gossypium hirsutum HOM05D005120 ORTHO05D006174 2.2e-198 696.0 457 80.3
Rhsim11G0027600 Rhododendron simsii HOM05D005120 ORTHO05D006174 2.2e-198 696.0 546 71.8
Gohir.A03G000018 Gossypium hirsutum HOM05D005120 ORTHO05D006174 2.8e-198 695.7 457 80.5
TWI60G0565 Tripterygium wilfordii HOM05D005120 ORTHO05D006174 1.1e-197 693.7 520 74.0
GSVIVG01029984001 Vitis vinifera HOM05D005120 ORTHO05D006174 1.1e-197 693.7 450 81.8
Medtr8g070830 Medicago truncatula HOM05D005120 ORTHO05D006174 1.4e-197 693.3 455 81.5
Thhalv10007389m.g Eutrema salsugineum HOM05D005120 ORTHO05D006174 1.8e-197 693.0 456 80.5
Atru.chr6.1569 Acer truncatum HOM05D005120 ORTHO05D006174 1.5e-196 689.9 454 80.0
BcaB03g13768 Brassica carinata HOM05D005120 ORTHO05D006174 3.4e-196 688.7 456 80.3
Carub.0001s3040 Capsella rubella HOM05D005120 ORTHO05D006174 4.5e-196 688.3 456 80.7
Lalb_Chr16g0391911 Lupinus albus HOM05D005120 ORTHO05D006174 4.5e-196 688.3 484 76.4
AL1G46150 Arabidopsis lyrata HOM05D005120 ORTHO05D006174 1.0e-195 687.2 485 77.1
AT1G32080 Arabidopsis thaliana HOM05D005120 ORTHO05D006174 1.3e-195 686.8 456 80.0
Sp1g27750 Schrenkiella parvula HOM05D005120 ORTHO05D006174 1.3e-195 686.8 456 80.3
Nitab4.5_0000543g0120 Nicotiana tabacum HOM05D005120 ORTHO05D006174 5.0e-195 684.9 458 79.5
THA.LOC104798500 Tarenaya hassleriana HOM05D005120 ORTHO05D006174 5.0e-195 684.9 511 73.4
BcaC05g27233 Brassica carinata HOM05D005120 ORTHO05D006174 6.5e-195 684.5 458 79.7
BraA05t21413Z Brassica rapa HOM05D005120 ORTHO05D006174 6.5e-195 684.5 456 79.6
BcaC05g27930 Brassica carinata HOM05D005120 ORTHO05D006174 8.5e-195 684.1 456 79.6
BraA09t38958Z Brassica rapa HOM05D005120 ORTHO05D006174 1.1e-194 683.7 457 79.6
Glyma.16G095100 Glycine max HOM05D005120 ORTHO05D006174 1.4e-194 683.3 445 81.3
C05p31470 Brassica napus HOM05D005120 ORTHO05D006174 3.2e-194 682.2 458 79.3
BolC5t31871H Brassica oleracea HOM05D005120 ORTHO05D006174 3.2e-194 682.2 458 79.3
COL.COLO4_16896 Corchorus olitorius HOM05D005120 ORTHO05D006174 3.2e-194 682.2 453 79.9
ClCG07G002270 Citrullus lanatus HOM05D005120 ORTHO05D006174 1.2e-193 680.2 442 81.9
Sopen08g024900 Solanum pennellii HOM05D005120 ORTHO05D006174 2.1e-193 679.5 452 79.2
TAR374G0846 Trochodendron aralioides HOM05D005120 ORTHO05D006174 3.6e-193 678.7 529 71.3
arahy.Tifrunner.gnm1.ann1.H9FFKJ Arachis hypogaea HOM05D005120 ORTHO05D006174 8.0e-193 677.6 444 80.9
Phvul.003G274000 Phaseolus vulgaris HOM05D005120 ORTHO05D006174 1.0e-192 677.2 434 82.0
Solyc08g076290.3 Solanum lycopersicum HOM05D005120 ORTHO05D006174 3.0e-192 675.6 534 70.0
Aa31LG2G13920 Aethionema arabicum HOM05D005120 ORTHO05D006174 1.1e-191 673.7 458 79.0
Cc08_g03980 Coffea canephora HOM05D005120 ORTHO05D006174 1.1e-191 673.7 530 70.9
TPR.G6179 Trifolium pratense HOM05D005120 ORTHO05D006174 1.5e-191 673.3 486 75.7
MELO3C026723.2 Cucumis melo HOM05D005120 ORTHO05D006174 2.6e-191 672.5 519 72.1
VMungo0251G1066 Vigna mungo HOM05D005120 ORTHO05D006174 7.4e-191 671.0 436 80.7
Psat4g111760 Pisum sativum HOM05D005120 ORTHO05D006174 2.2e-190 669.5 470 76.6
PGSC0003DMG402009291 Solanum tuberosum HOM05D005120 ORTHO05D006174 2.8e-190 669.1 434 80.9
CsaV3_3G030430 Cucumis sativus L. HOM05D005120 ORTHO05D006174 6.3e-190 667.9 495 74.1
Sed0007636 Sechium edule HOM05D005120 ORTHO05D006174 1.8e-189 666.4 512 72.7
Lj8A318T44 Lonicera japonica HOM05D005120 ORTHO05D006174 3.1e-189 665.6 511 72.8
Lsat_1_v5_gn_6_17781 Lactuca sativa HOM05D005120 ORTHO05D006174 4.1e-189 665.2 506 71.1
SGA_v2.0_scaffold42G16013 Striga asiatica HOM05D005120 ORTHO05D006174 4.1e-189 665.2 452 79.9
Dinv29029 Davidia involucrata HOM05D005120 ORTHO05D006174 9.1e-189 664.1 431 81.9
MSTRG.11896 Avicennia marina HOM05D005120 ORTHO05D006174 1.6e-188 663.3 471 76.2
SalBow1G1967 Salvia bowleyana HOM05D005120 ORTHO05D006174 1.6e-188 663.3 529 70.3
Migut.A00586 Erythranthe guttata HOM05D005120 ORTHO05D006174 3.5e-188 662.1 503 73.2
Actinidia27272 Actinidia chinensis HOM05D005120 ORTHO05D006174 7.7e-188 661.0 513 70.6
Nn1g01918 Nelumbo nucifera HOM05D005120 ORTHO05D006174 1.0e-187 660.6 500 72.8
A05p25290 Brassica napus HOM05D005120 ORTHO05D006174 2.9e-187 659.1 443 79.5
Nitab4.5_0006395g0010 Nicotiana tabacum HOM05D005120 ORTHO05D006174 3.8e-187 658.7 487 73.3
BcaB07g32869 Brassica carinata HOM05D005120 ORTHO05D006174 5.0e-187 658.3 454 78.2
C05p39360 Brassica napus HOM05D005120 ORTHO05D006174 5.0e-187 658.3 443 79.2
BolC5t32672H Brassica oleracea HOM05D005120 ORTHO05D006174 5.0e-187 658.3 443 79.2
arahy.Tifrunner.gnm1.ann1.PMQ83Q Arachis hypogaea HOM05D005120 ORTHO05D006174 6.5e-187 657.9 466 76.8
Sc07g0008440 Simmondsia chinensis HOM05D005120 ORTHO05D006174 1.5e-186 656.8 453 77.5
vmacro00236 Vaccinium macrocarpon HOM05D005120 ORTHO05D006174 1.9e-186 656.4 452 79.0
Oeu042231.1 Olea europaea HOM05D005120 ORTHO05D006174 2.5e-186 656.0 494 71.9
HanXRQChr02g0050021 Helianthus annuus HOM05D005120 ORTHO05D006174 7.2e-186 654.4 473 73.4
Aqoxy7G00879 Aquilegia oxysepala HOM05D005120 ORTHO05D006174 6.1e-185 651.4 486 73.5
AUR62018612 Chenopodium quinoa HOM05D005120 ORTHO05D006174 1.8e-184 649.8 533 68.5
Sed0003941 Sechium edule HOM05D005120 ORTHO05D006174 3.0e-184 649.0 517 70.0
Peaxi162Scf00408g00023 Petunia axillaris HOM05D005120 ORTHO05D006174 4.4e-183 645.2 536 67.0
MBI04_g36023_MAGBIO Magnolia biondii HOM05D005120 ORTHO05D006174 5.7e-183 644.8 455 74.7
Hund14388 Selenicereus undatus HOM05D005120 ORTHO05D006174 1.7e-182 643.3 466 74.0
Ca_22546_v3 Cicer arietinum L. HOM05D005120 ORTHO05D006174 3.7e-182 642.1 405 82.7
Ah.07g201110 Amaranthus hybridus HOM05D005120 ORTHO05D006174 4.8e-182 641.7 477 72.3
Glyma.01G009900 Glycine max HOM05D005120 ORTHO05D006174 4.1e-181 638.6 456 75.2
SGA_v2.0_scaffold89G27426 Striga asiatica HOM05D005120 ORTHO05D006174 1.6e-180 636.7 449 77.7
A09p34100 Brassica napus HOM05D005120 ORTHO05D006174 3.5e-180 635.6 430 78.8
Aa31LG2G11060 Aethionema arabicum HOM05D005120 ORTHO05D006174 5.9e-180 634.8 451 75.6
CAN.G773.16 Capsicum annuum HOM05D005120 ORTHO05D006174 1.0e-179 634.0 405 82.7
EL10Ac5g11981 Beta vulgaris HOM05D005120 ORTHO05D006174 2.2e-179 632.9 459 74.7
Phvul.002G132800 Phaseolus vulgaris HOM05D005120 ORTHO05D006174 2.9e-179 632.5 458 75.1
Glyma.09G211200 Glycine max HOM05D005120 ORTHO05D006174 3.2e-178 629.0 456 74.8
AUR62007376 Chenopodium quinoa HOM05D005120 ORTHO05D006174 2.7e-177 625.9 404 80.9
ECA233G2235 Erigeron canadensis HOM05D005120 ORTHO05D006174 2.7e-177 625.9 432 76.9
CDE06G0533 Ceratophyllum demersum HOM05D005120 ORTHO05D006174 1.4e-176 623.6 494 69.0
Os01g0511600 Oryza sativa ssp. japonica HOM05D005120 ORTHO05D006174 8.8e-176 620.9 421 74.8
Nn3g19343 Nelumbo nucifera HOM05D005120 ORTHO05D006174 2.8e-174 615.9 481 68.8
PSO717G0011 Papaver somniferum HOM05D005120 ORTHO05D006174 3.7e-174 615.5 495 69.9
ATR0829G037 Amborella trichopoda HOM05D005120 ORTHO05D006174 3.1e-173 612.5 441 73.5
Atru.chr6.1566 Acer truncatum HOM05D005120 ORTHO05D006174 1.9e-170 603.2 491 69.7
Hund11160 Selenicereus undatus HOM05D005120 ORTHO05D006174 1.9e-170 603.2 498 67.1
PSO675G2578 Papaver somniferum HOM05D005120 ORTHO05D006174 5.5e-170 601.7 458 72.9
Lalb_Chr16g0380871 Lupinus albus HOM05D005120 ORTHO05D006174 2.0e-167 593.2 454 70.3
Zm00001eb025160 Zea mays HOM05D005120 ORTHO05D006174 9.8e-167 590.9 459 68.8
DCAR_004262 Daucus carota HOM05D005120 ORTHO05D006174 2.3e-163 579.7 467 67.9
unitig_747.g21935 Utricularia gibba HOM05D005120 ORTHO05D006174 1.8e-160 570.1 500 64.0
CSS0018999 Camellia sinensis var. sinensis HOM05D005120 ORTHO05D006174 5.4e-157 558.5 477 67.7
arahy.Tifrunner.gnm1.ann1.1W9K9Y Arachis hypogaea HOM05D005120 ORTHO05D006174 9.2e-149 531.2 457 64.8
arahy.Tifrunner.gnm1.ann1.5B6WJ4 Arachis hypogaea HOM05D005120 ORTHO05D006174 9.2e-149 531.2 457 64.8
AagrBONN_evm.TU.Sc2ySwM_117.3701 Anthoceros agrestis HOM05D005120 ORTHO05D006174 7.1e-141 505.0 445 60.0
FAN13G2921 Fragaria x ananassa HOM05D005120 ORTHO05D006174 4.6e-140 502.3 375 74.4
Mapoly0008s0007 Marchantia polymorpha HOM05D005120 ORTHO05D006174 2.4e-136 490.0 455 58.7
Pp3c1_16500 Physcomitrium patens HOM05D005120 ORTHO05D006174 2.0e-135 486.9 440 59.1
Actinidia01339 Actinidia chinensis HOM05D005120 ORTHO05D006174 7.1e-133 478.4 375 72.0
Ciclev10003461m.g Citrus clementina HOM05D005120 ORTHO05D006174 8.1e-129 464.9 375 68.3
Dinv06901 Davidia involucrata HOM05D005120 ORTHO05D006174 3.5e-124 449.5 376 65.7
SMO347G0341 Selaginella moellendorffii HOM05D005120 ORTHO05D006174 2.4e-120 436.8 367 62.7
Atru.chr6.1568 Acer truncatum HOM05D005120 ORTHO05D006174 2.5e-106 390.2 229 89.1
PRCOL_00000663 Prasinoderma coloniale HOM05D005120 ORTHO05D006174 3.5e-100 369.8 412 50.2
Atru.chr6.1567 Acer truncatum HOM05D005120 ORTHO05D006174 9.4e-93 345.1 263 70.3
Lalb_Chr16g0380881 Lupinus albus HOM05D005120 ORTHO05D006174 5.9e-87 325.9 454 47.1
Cre09.g394850 Chlamydomonas reinhardtii HOM05D005120 ORTHO05D006174 3.9e-75 286.6 451 39.7
Glyma.08G265967 Glycine max HOM05D005120 ORTHO05D006174 7.0e-72 275.8 167 89.8
SMO367G1009 Selaginella moellendorffii HOM05D005120 ORTHO05D006174 1.5e-69 268.1 386 39.4
CANSAT64G2484 Cannabis sativa HOM05D005120 ORTHO05D006174 5.5e-69 266.2 174 84.5
Pp3c4_7680 Physcomitrium patens HOM05D005120 ORTHO05D006174 5.3e-64 249.6 421 34.4
Zm00001eb025140 Zea mays HOM05D005120 ORTHO05D006174 2.9e-62 243.8 205 62.9
AagrBONN_evm.TU.Sc2ySwM_368.2516 Anthoceros agrestis HOM05D005120 ORTHO05D006174 8.8e-59 232.3 376 37.0
PRCOL_00006607 Prasinoderma coloniale HOM05D005120 ORTHO05D006174 1.6e-55 221.5 453 37.1
CBR_g23155 Chara braunii HOM05D005120 ORTHO05D006174 3.6e-52 210.3 163 66.9
arahy.Tifrunner.gnm1.ann1.B01XES Arachis hypogaea HOM05D005120 ORTHO05D006174 6.8e-51 206.1 234 53.0
PGR044G1750 Punica granatum HOM05D005120 ORTHO05D006174 8.6e-38 162.5 141 66.0
SEGI_09610 Sequoiadendron giganteum HOM05D005120 ORTHO05D006174 1.5e-37 161.8 125 62.4
SEGI_28661 Sequoiadendron giganteum HOM05D005120 ORTHO05D006174 5.6e-29 133.3 120 62.5
CBR_g23153 Chara braunii HOM05D005120 ORTHO05D006174 6.8e-27 126.3 100 65.0
VMungo0647G0996 Vigna mungo HOM05D005120 ORTHO05D006174 3.7e-25 120.6 98 72.4
CARHR291910 Cardamine hirsuta HOM05D005120 ORTHO05D006174 6.4e-25 119.8 86 68.6
Oeu023967.3 Olea europaea HOM05D005120 ORTHO05D006174 6.8e-19 99.8 101 58.4
MCO13G610 Micromonas commoda HOM05D005120 ORTHO05D006174 7.6e-18 96.3 388 25.0
PRCOL_00001036 Prasinoderma coloniale HOM05D001145 ORTHO05D014381 2.5e-13 81.3 424 25.7
PRCOL_00005007 Prasinoderma coloniale HOM05D013059 ORTHO05D014381 9.9e-10 69.3 353 24.4
CDE03G0049 Ceratophyllum demersum HOM05D005120 ORTHO05D006174 6.4e-09 66.6 67 58.2


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