Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0212341 Rosa chinensis HOM05D045915 ORTHO05D030750 6.1e-62 240.7 129 100.0
RcHm_v2.0_Chr1g0319921 Rosa chinensis HOM05D045915 ORTHO05D030750 9.7e-60 233.4 129 97.7
RcHm_v2.0_Chr4g0437011 Rosa chinensis HOM05D002721 ORTHO05D002919 9.8e-20 100.5 63 85.7
FvH4_4g28890 Fragaria vesca HOM05D002721 ORTHO05D002919 1.1e-18 97.1 63 82.5
FAN07G0888 Fragaria x ananassa HOM05D002721 ORTHO05D002919 1.1e-18 97.1 63 82.5
FAN12G1937 Fragaria x ananassa HOM05D002721 ORTHO05D002919 1.1e-18 97.1 63 82.5
FAN22G0742 Fragaria x ananassa HOM05D002721 ORTHO05D002919 1.8e-18 96.3 63 81.0
FAN17G0692 Fragaria x ananassa HOM05D002721 ORTHO05D002919 1.2e-17 93.6 63 81.0
MD16G1053400 Malus domestica HOM05D002721 ORTHO05D002919 1.4e-13 80.1 62 67.7
MD13G1054600 Malus domestica HOM05D002721 ORTHO05D002919 3.4e-12 75.5 94 51.1
Prupe.1G297300 Prunus persica HOM05D002721 ORTHO05D002919 1.3e-11 73.6 62 61.3
CANSAT64G0632 Cannabis sativa HOM05D002721 ORTHO05D002919 1.6e-09 66.6 64 54.7
Sed0004629 Sechium edule HOM05D002721 ORTHO05D002919 3.0e-08 62.4 51 64.7
Haze_11843 Corylus avellana HOM05D002721 ORTHO05D002919 1.9e-07 59.7 59 54.2
MELO3C005176.2 Cucumis melo HOM05D002721 ORTHO05D002919 1.9e-07 59.7 51 60.8
Sabra10G0104500 Salix brachista HOM05D002721 ORTHO05D002919 1.9e-07 59.7 60 55.0
QL03p073121 Quercus lobata HOM05D002721 ORTHO05D002919 2.5e-07 59.3 59 52.5
CSS0049515 Camellia sinensis var. sinensis HOM05D002721 ORTHO05D002919 5.6e-07 58.2 48 62.5
CsaV3_5G018810 Cucumis sativus L. HOM05D002721 ORTHO05D002919 5.6e-07 58.2 51 58.8
Cfa008829 Carpinus fangiana HOM05D002721 ORTHO05D002919 7.3e-07 57.8 59 52.5
ClCG01G007340 Citrullus lanatus HOM05D002721 ORTHO05D002919 7.3e-07 57.8 51 56.9
Potri.010G135900 Populus trichocarpa HOM05D002721 ORTHO05D002919 1.2e-06 57.0 60 53.3
Actinidia13414 Actinidia chinensis HOM05D002721 ORTHO05D002919 2.8e-06 55.8 57 52.6
Nitab4.5_0000259g0010 Nicotiana tabacum HOM05D002721 ORTHO05D002919 2.8e-06 55.8 59 49.2
Hma1.2p1_1348F.1_g277310 Hydrangea macrophylla HOM05D002721 ORTHO05D002919 3.6e-06 55.5 50 58.0
Eucgr.G02406 Eucalyptus grandis HOM05D002721 ORTHO05D002919 6.2e-06 54.7 57 47.4
Solyc05g010590.4 Solanum lycopersicum HOM05D002721 ORTHO05D002919 6.2e-06 54.7 51 52.9


User provided reference genes

Program Settings