Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0208571 Rosa chinensis HOM05D008485 ORTHO05D009647 2.8e-106 388.7 200 100.0
RcHm_v2.0_Chr4g0434301 Rosa chinensis HOM05D008485 ORTHO05D009647 9.0e-105 383.6 200 98.0
RcHm_v2.0_Chr4g0403221 Rosa chinensis HOM05D008485 ORTHO05D009647 1.5e-104 382.9 200 98.0
RcHm_v2.0_Chr5g0059931 Rosa chinensis HOM05D008485 ORTHO05D009647 6.9e-89 330.9 175 98.3
RcHm_v2.0_Chr1g0329081 Rosa chinensis HOM05D008485 ORTHO05D009647 1.2e-35 154.1 185 45.4
FvH4_1g18340 Fragaria vesca HOM05D008485 ORTHO05D009647 7.5e-35 151.4 182 45.6
FAN13G0756 Fragaria x ananassa HOM05D008485 ORTHO05D009647 9.8e-35 151.0 181 45.9
FAN16G1989 Fragaria x ananassa HOM05D008485 ORTHO05D009647 9.8e-35 151.0 181 45.9
FAN23G3051 Fragaria x ananassa HOM05D008485 ORTHO05D009647 9.8e-35 151.0 181 45.9
FvH4_3g05430 Fragaria vesca HOM05D008485 ORTHO05D009647 2.2e-34 149.8 182 45.1
FAN23G0398 Fragaria x ananassa HOM05D008485 ORTHO05D009647 2.2e-34 149.8 173 46.2
FAN13G3330 Fragaria x ananassa HOM05D008485 ORTHO05D009647 2.9e-34 149.4 181 45.9
FAN10G1422 Fragaria x ananassa HOM05D008485 ORTHO05D009647 3.7e-34 149.1 181 45.3
FvH4_3g43970 Fragaria vesca HOM05D008485 ORTHO05D009647 9.8e-27 124.4 138 45.7
FAN01G1265 Fragaria x ananassa HOM05D008485 ORTHO05D009647 2.2e-26 123.2 176 40.9
FAN17G2617 Fragaria x ananassa HOM05D008485 ORTHO05D009647 5.4e-25 118.6 115 50.4
RcHm_v2.0_Chr2g0094421 Rosa chinensis HOM05D008485 ORTHO05D009647 1.9e-22 110.2 160 35.0
FAN10G0930 Fragaria x ananassa HOM05D008485 ORTHO05D009647 4.7e-21 105.5 153 39.2
FAN04G2058 Fragaria x ananassa HOM05D008485 ORTHO05D009647 8.9e-20 101.3 135 43.7
FAN10G2796 Fragaria x ananassa HOM05D008485 ORTHO05D009647 8.9e-20 101.3 135 43.7
FAN15G1508 Fragaria x ananassa HOM05D008485 ORTHO05D009647 2.0e-19 100.1 135 43.7
RcHm_v2.0_Chr5g0070861 Rosa chinensis HOM05D008485 ORTHO05D009647 9.9e-19 97.8 94 44.7
FvH4_3g26318 Fragaria vesca HOM05D008485 ORTHO05D009647 1.3e-18 97.4 99 45.5
RcHm_v2.0_Chr7g0206041 Rosa chinensis HOM05D008485 ORTHO05D009647 3.2e-17 92.8 130 37.7
FAN02G1844 Fragaria x ananassa HOM05D008485 ORTHO05D009647 9.2e-17 91.3 121 41.3
RcHm_v2.0_Chr5g0025151 Rosa chinensis HOM05D008485 ORTHO05D009647 1.2e-16 90.9 43 95.3
RcHm_v2.0_Chr5g0072491 Rosa chinensis HOM05D008485 ORTHO05D009647 1.1e-14 84.3 134 33.6
FvH4_6g20331 Fragaria vesca HOM05D008485 ORTHO05D009647 5.8e-11 72.0 111 36.0
RcHm_v2.0_Chr5g0029021 Rosa chinensis HOM05D008485 ORTHO05D009647 1.3e-10 70.9 72 43.1
FvH4_2g08421 Fragaria vesca HOM05D008485 ORTHO05D009647 2.2e-10 70.1 76 47.4
FAN08G2448 Fragaria x ananassa HOM05D008485 ORTHO05D009647 6.0e-08 62.0 142 33.8
TWI23G0759 Tripterygium wilfordii HOM05D008985 ORTHO05D000222 5.1e-07 58.9 146 30.1
RcHm_v2.0_Chr6g0264941 Rosa chinensis HOM05D008485 ORTHO05D009647 4.3e-06 55.8 53 54.7


User provided reference genes

Program Settings