Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0208561 Rosa chinensis HOM05D008485 ORTHO05D009647 4.3e-118 427.9 205 100.0
RcHm_v2.0_Chr5g0025151 Rosa chinensis HOM05D008485 ORTHO05D009647 3.1e-108 395.2 205 93.7
FAN13G3330 Fragaria x ananassa HOM05D008485 ORTHO05D009647 2.5e-41 172.9 211 41.7
FAN23G0398 Fragaria x ananassa HOM05D008485 ORTHO05D009647 2.5e-41 172.9 211 41.7
FAN11G3939 Fragaria x ananassa HOM05D008485 ORTHO05D009647 3.2e-41 172.6 211 42.2
FAN23G3051 Fragaria x ananassa HOM05D008485 ORTHO05D009647 3.2e-41 172.6 211 42.2
RcHm_v2.0_Chr1g0329081 Rosa chinensis HOM05D008485 ORTHO05D009647 6.3e-37 158.3 127 52.0
RcHm_v2.0_Chr6g0264941 Rosa chinensis HOM05D008485 ORTHO05D009647 6.3e-37 158.3 127 52.0
RcHm_v2.0_Chr5g0076701 Rosa chinensis HOM05D008485 ORTHO05D009647 1.6e-35 153.7 101 72.3
RcHm_v2.0_Chr6g0272081 Rosa chinensis HOM05D008485 ORTHO05D009647 3.8e-34 149.1 101 70.3
RcHm_v2.0_Chr1g0341051 Rosa chinensis HOM05D008485 ORTHO05D009647 5.9e-27 125.2 160 41.9
RcHm_v2.0_Chr5g0029021 Rosa chinensis HOM05D008485 ORTHO05D009647 1.3e-26 124.0 143 42.7
RcHm_v2.0_Chr5g0070861 Rosa chinensis HOM05D008485 ORTHO05D009647 1.7e-26 123.6 162 40.7
RcHm_v2.0_Chr5g0041581 Rosa chinensis HOM05D008485 ORTHO05D009647 1.5e-25 120.6 143 42.0
RcHm_v2.0_Chr5g0036581 Rosa chinensis HOM05D008485 ORTHO05D009647 4.2e-25 119.0 163 39.9
FAN10G1422 Fragaria x ananassa HOM05D008485 ORTHO05D009647 8.8e-23 111.3 80 57.5
FAN13G0756 Fragaria x ananassa HOM05D008485 ORTHO05D009647 2.8e-21 106.3 78 57.7
RcHm_v2.0_Chr4g0403221 Rosa chinensis HOM05D008485 ORTHO05D009647 3.7e-21 105.9 44 97.7
RcHm_v2.0_Chr4g0434301 Rosa chinensis HOM05D008485 ORTHO05D009647 3.7e-21 105.9 44 97.7
RcHm_v2.0_Chr7g0206051 Rosa chinensis HOM05D008485 ORTHO05D009647 3.5e-19 99.4 100 47.0
FAN16G1636 Fragaria x ananassa HOM05D008485 ORTHO05D009647 3.2e-17 92.8 153 36.6
RcHm_v2.0_Chr3g0477491 Rosa chinensis HOM05D009879 ORTHO05D009647 3.2e-17 92.8 148 33.8
FvH4_1g01701 Fragaria vesca HOM05D002291 ORTHO05D000222 2.3e-15 86.7 138 31.2
FAN10G2059 Fragaria x ananassa HOM05D008485 ORTHO05D009647 2.3e-15 86.7 61 57.4
FAN19G1637 Fragaria x ananassa HOM05D002291 ORTHO05D000222 2.3e-15 86.7 138 31.2
FAN28G2311 Fragaria x ananassa HOM05D002291 ORTHO05D000222 2.3e-15 86.7 138 31.2
FAN23G1656 Fragaria x ananassa HOM05D002291 ORTHO05D000222 5.2e-15 85.5 138 30.4
RcHm_v2.0_Chr2g0086631 Rosa chinensis HOM05D002291 ORTHO05D000222 6.8e-15 85.1 138 29.7
FAN01G2912 Fragaria x ananassa HOM05D009879 ORTHO05D009647 1.2e-14 84.3 143 30.8
FAN26G1277 Fragaria x ananassa HOM05D002291 ORTHO05D000222 2.6e-14 83.2 138 29.7
MD09G1277700 Malus domestica HOM05D008485 ORTHO05D009647 4.1e-12 75.9 77 45.5
RcHm_v2.0_Chr1g0332631 Rosa chinensis HOM05D009879 ORTHO05D009647 4.1e-12 75.9 114 31.6
RcHm_v2.0_Chr5g0004171 Rosa chinensis HOM05D008485 ORTHO05D009647 4.1e-12 75.9 54 74.1
FAN21G0826 Fragaria x ananassa HOM05D009879 ORTHO05D009647 1.2e-11 74.3 109 33.0
CANSAT56G2277 Cannabis sativa HOM05D014621 ORTHO05D015019 7.8e-11 71.6 166 26.5
FAN17G2464 Fragaria x ananassa HOM05D009879 ORTHO05D009647 1.3e-10 70.9 109 32.1
CANSAT01G1847 Cannabis sativa HOM05D014621 ORTHO05D015019 4.3e-09 65.9 144 29.2
MELO3C031804.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.0e-07 61.2 146 24.0
Lj1A283G17 Lonicera japonica HOM05D008705 ORTHO05D000669 2.3e-07 60.1 142 27.5
MD15G1306500 Malus domestica HOM05D000514 ORTHO05D000222 8.9e-07 58.2 118 24.6
FAN17G2617 Fragaria x ananassa HOM05D008485 ORTHO05D009647 2.0e-06 57.0 36 61.1
FvH4_1g18340 Fragaria vesca HOM05D008485 ORTHO05D009647 2.6e-06 56.6 45 53.3
FvH4_3g05430 Fragaria vesca HOM05D008485 ORTHO05D009647 2.6e-06 56.6 45 53.3
MD04G1142700 Malus domestica HOM05D000514 ORTHO05D000222 2.6e-06 56.6 118 23.7


User provided reference genes

Program Settings