Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0206041 Rosa chinensis HOM05D008485 ORTHO05D009647 5.8e-77 290.8 145 100.0
RcHm_v2.0_Chr2g0094421 Rosa chinensis HOM05D008485 ORTHO05D009647 8.6e-57 223.8 140 80.7
RcHm_v2.0_Chr5g0072491 Rosa chinensis HOM05D008485 ORTHO05D009647 7.3e-56 220.7 117 94.0
RcHm_v2.0_Chr5g0070861 Rosa chinensis HOM05D008485 ORTHO05D009647 1.8e-46 189.5 105 90.5
RcHm_v2.0_Chr5g0029021 Rosa chinensis HOM05D008485 ORTHO05D009647 2.3e-33 146.0 88 81.8
RcHm_v2.0_Chr7g0207401 Rosa chinensis HOM05D008485 ORTHO05D009647 2.5e-32 142.5 82 89.0
RcHm_v2.0_Chr7g0206191 Rosa chinensis HOM05D008485 ORTHO05D009647 2.8e-31 139.0 82 85.4
RcHm_v2.0_Chr5g0036581 Rosa chinensis HOM05D008485 ORTHO05D009647 4.0e-22 108.6 53 96.2
RcHm_v2.0_Chr4g0403221 Rosa chinensis HOM05D008485 ORTHO05D009647 2.0e-21 106.3 140 39.3
RcHm_v2.0_Chr4g0434301 Rosa chinensis HOM05D008485 ORTHO05D009647 2.6e-21 105.9 132 40.2
FAN10G1422 Fragaria x ananassa HOM05D008485 ORTHO05D009647 2.1e-18 96.3 111 44.1
FAN13G0756 Fragaria x ananassa HOM05D008485 ORTHO05D009647 2.1e-18 96.3 111 44.1
FAN16G1989 Fragaria x ananassa HOM05D008485 ORTHO05D009647 2.1e-18 96.3 111 44.1
FAN23G3051 Fragaria x ananassa HOM05D008485 ORTHO05D009647 2.1e-18 96.3 111 44.1
RcHm_v2.0_Chr7g0208571 Rosa chinensis HOM05D008485 ORTHO05D009647 1.0e-17 94.0 130 37.7
FAN13G3330 Fragaria x ananassa HOM05D008485 ORTHO05D009647 2.3e-17 92.8 111 43.2
FAN23G0398 Fragaria x ananassa HOM05D008485 ORTHO05D009647 2.3e-17 92.8 111 43.2
RcHm_v2.0_Chr1g0329081 Rosa chinensis HOM05D008485 ORTHO05D009647 3.3e-16 89.0 143 37.8
FvH4_1g18340 Fragaria vesca HOM05D008485 ORTHO05D009647 6.9e-14 81.3 142 35.9
FvH4_3g05430 Fragaria vesca HOM05D008485 ORTHO05D009647 6.9e-14 81.3 142 35.9
FAN17G2617 Fragaria x ananassa HOM05D008485 ORTHO05D009647 7.7e-13 77.8 121 38.0
FvH4_3g43970 Fragaria vesca HOM05D008485 ORTHO05D009647 1.7e-12 76.6 124 37.1
RcHm_v2.0_Chr5g0041591 Rosa chinensis HOM05D008485 ORTHO05D347744 3.8e-12 75.5 50 74.0
RcHm_v2.0_Chr5g0059931 Rosa chinensis HOM05D008485 ORTHO05D009647 4.2e-11 72.0 105 36.2
FvH4_6g23072 Fragaria vesca HOM05D009879 ORTHO05D009647 6.7e-09 64.7 114 34.2
FAN07G2263 Fragaria x ananassa HOM05D011706 ORTHO05D009647 1.5e-08 63.5 130 30.8
FvH4_3g26318 Fragaria vesca HOM05D008485 ORTHO05D009647 2.5e-08 62.8 97 37.1
FAN18G0028 Fragaria x ananassa HOM05D009879 ORTHO05D009647 1.3e-07 60.5 130 31.5
FAN01G1265 Fragaria x ananassa HOM05D008485 ORTHO05D009647 2.2e-07 59.7 120 31.7
TWI23G0759 Tripterygium wilfordii HOM05D008985 ORTHO05D000222 2.2e-07 59.7 106 32.1
TWI38G1494 Tripterygium wilfordii HOM05D008985 ORTHO05D000222 8.2e-07 57.8 106 31.1
RcHm_v2.0_Chr5g0025151 Rosa chinensis HOM05D008485 ORTHO05D009647 1.4e-06 57.0 52 44.2


User provided reference genes

Program Settings