Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0203191 Rosa chinensis HOM05D008099 ORTHO05D010084 4.2e-66 254.6 134 100.0
FAN04G2136 Fragaria x ananassa HOM05D008099 ORTHO05D010084 1.3e-54 216.5 138 84.8
FAN08G3271 Fragaria x ananassa HOM05D008099 ORTHO05D010084 8.3e-54 213.8 137 84.7
FAN18G2867 Fragaria x ananassa HOM05D008099 ORTHO05D010084 1.2e-52 209.9 143 81.8
FvH4_5g18850 Fragaria vesca HOM05D008099 ORTHO05D010084 1.6e-52 209.5 144 81.2
FAN18G4449 Fragaria x ananassa HOM05D008099 ORTHO05D010084 5.9e-52 207.6 143 81.1
MD04G1064000 Malus domestica HOM05D008099 ORTHO05D010084 1.1e-21 107.1 135 50.4
Prupe.5G069300 Prunus persica HOM05D008099 ORTHO05D010084 5.4e-21 104.8 136 51.5
CiPaw.12G109700 Carya illinoinensis HOM05D008099 ORTHO05D010084 6.2e-17 91.3 130 46.9
Gohir.D03G162700 Gossypium hirsutum HOM05D008099 ORTHO05D010084 5.2e-16 88.2 129 45.7
Potri.001G158100 Populus trichocarpa HOM05D008099 ORTHO05D010084 5.2e-16 88.2 128 47.7
Gorai.003G171300 Gossypium raimondii HOM05D008099 ORTHO05D010084 2.0e-15 86.3 129 45.0
Sabra01G0133400 Salix brachista HOM05D008099 ORTHO05D010084 9.9e-15 84.0 134 44.8
COL.COLO4_37181 Corchorus olitorius HOM05D008099 ORTHO05D010084 1.7e-14 83.2 135 44.4
Gohir.A03G008200 Gossypium hirsutum HOM05D008099 ORTHO05D010084 1.7e-14 83.2 135 44.4
Actinidia05205 Actinidia chinensis HOM05D008099 ORTHO05D010084 2.2e-14 82.8 134 41.8
Cpa.g.sc29.154 Carica papaya HOM05D008099 ORTHO05D010084 2.2e-14 82.8 134 44.8
Ciclev10022924m.g Citrus clementina HOM05D008099 ORTHO05D010084 2.9e-14 82.4 134 42.5
Gohir.D12G219832 Gossypium hirsutum HOM05D008099 ORTHO05D010084 3.7e-14 82.0 134 46.3
Potri.003G076700 Populus trichocarpa HOM05D008099 ORTHO05D010084 6.4e-14 81.3 130 43.8
Thecc.03G251800 Theobroma cacao HOM05D008099 ORTHO05D010084 1.4e-13 80.1 134 49.3
Manes.01G080400 Manihot esculenta HOM05D008099 ORTHO05D010084 1.9e-13 79.7 134 44.8
Gorai.008G235500 Gossypium raimondii HOM05D008099 ORTHO05D010084 2.4e-13 79.3 134 46.3
Gohir.A12G217300 Gossypium hirsutum HOM05D008099 ORTHO05D010084 4.1e-13 78.6 134 45.5
Atru.chr9.1318 Acer truncatum HOM05D008099 ORTHO05D010084 5.4e-13 78.2 115 46.1
CiPaw.11G154100 Carya illinoinensis HOM05D008099 ORTHO05D010084 2.7e-12 75.9 135 43.0
Oeu019597.1 Olea europaea HOM05D008099 ORTHO05D010084 7.8e-12 74.3 134 40.3
Gorai.004G198900 Gossypium raimondii HOM05D008099 ORTHO05D010084 1.3e-11 73.6 130 40.8
Rhsim07G0108300 Rhododendron simsii HOM05D008099 ORTHO05D010084 2.3e-11 72.8 132 38.6
PGSC0003DMG400012531 Solanum tuberosum HOM05D008099 ORTHO05D010084 2.3e-11 72.8 135 36.3
TAR374G1517 Trochodendron aralioides HOM05D008099 ORTHO05D010084 5.1e-11 71.6 134 37.3
Sopen08g003320 Solanum pennellii HOM05D008099 ORTHO05D010084 8.6e-11 70.9 135 35.6
TWI60G1554 Tripterygium wilfordii HOM05D008099 ORTHO05D010084 1.5e-10 70.1 134 42.5
DCAR_004951 Daucus carota HOM05D008099 ORTHO05D010084 1.9e-10 69.7 132 39.4
Hma1.2p1_0316F.1_g123190 Hydrangea macrophylla HOM05D008099 ORTHO05D010084 1.9e-10 69.7 135 39.3
Solyc08g007375.1 Solanum lycopersicum HOM05D008099 ORTHO05D010084 3.3e-10 68.9 135 34.8
Lsat_1_v5_gn_6_91081 Lactuca sativa HOM05D008099 ORTHO05D010084 7.3e-10 67.8 132 37.1
Cfa012714 Carpinus fangiana HOM05D008099 ORTHO05D010084 1.6e-09 66.6 134 42.5
Eucgr.D02077 Eucalyptus grandis HOM05D008099 ORTHO05D010084 1.1e-08 63.9 128 37.5
TAR627G0883 Trochodendron aralioides HOM05D008099 ORTHO05D010084 1.1e-08 63.9 134 36.6
Nn6g33963 Nelumbo nucifera HOM05D008099 ORTHO05D010084 5.2e-08 61.6 130 36.2
Nn8g39479 Nelumbo nucifera HOM05D008099 ORTHO05D010084 8.9e-08 60.8 130 39.2
DCAR_027775 Daucus carota HOM05D008099 ORTHO05D010084 1.5e-07 60.1 130 36.2
Hma1.2p1_0316F.1_g123200 Hydrangea macrophylla HOM05D008099 ORTHO05D010084 1.5e-07 60.1 135 35.6
Nn6g33964 Nelumbo nucifera HOM05D008099 ORTHO05D010084 2.6e-07 59.3 130 33.8
Solyc06g060675.1 Solanum lycopersicum HOM05D008099 ORTHO05D010084 3.4e-07 58.9 135 34.1
Sopen06g020800 Solanum pennellii HOM05D008099 ORTHO05D010084 3.4e-07 58.9 135 34.1
ECA233G2908 Erigeron canadensis HOM05D008099 ORTHO05D010084 4.4e-07 58.5 132 36.4
TAR624G1172 Trochodendron aralioides HOM05D008099 ORTHO05D010084 5.8e-07 58.2 134 35.1
Sc22g0000850 Simmondsia chinensis HOM05D008099 ORTHO05D010084 7.6e-07 57.8 135 35.6
PGSC0003DMG400035312 Solanum tuberosum HOM05D008099 ORTHO05D010084 1.3e-06 57.0 135 32.6
Lsat_1_v5_gn_3_841 Lactuca sativa HOM05D008099 ORTHO05D010084 2.2e-06 56.2 134 37.3
DCAR_008490 Daucus carota HOM05D008099 ORTHO05D010084 6.4e-06 54.7 136 35.3


User provided reference genes

Program Settings