Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 4.9e-171 604.4 304 100.0
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 9.9e-164 580.1 304 96.7
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 3.8e-163 578.2 304 96.4
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 2.5e-162 575.5 304 95.7
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 1.2e-153 546.6 304 91.1
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 3.3e-151 538.5 304 88.8
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 3.9e-144 515.0 303 84.2
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 2.5e-143 512.3 304 84.5
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 1.2e-140 503.4 298 82.6
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 2.0e-140 502.7 299 83.6
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.3e-139 500.0 304 81.9
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 1.3e-139 500.0 304 82.2
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 1.7e-139 499.6 299 82.9
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 1.7e-139 499.6 299 83.6
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 6.5e-139 497.7 299 81.9
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 7.2e-138 494.2 299 82.6
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 1.6e-137 493.0 304 80.9
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 3.6e-137 491.9 301 81.1
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.5e-135 486.5 304 79.6
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.6e-135 485.7 302 79.8
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 5.7e-135 484.6 304 80.3
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 5.7e-135 484.6 304 80.6
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 9.7e-135 483.8 304 80.9
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 9.7e-135 483.8 304 80.9
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 9.7e-135 483.8 298 81.9
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 9.7e-135 483.8 299 80.3
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 1.3e-134 483.4 298 81.9
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 2.2e-134 482.6 304 79.6
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 6.3e-134 481.1 304 77.6
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 8.2e-134 480.7 304 79.3
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 1.4e-133 479.9 304 78.3
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 1.8e-133 479.6 304 79.6
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 2.4e-133 479.2 299 80.3
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 2.4e-133 479.2 300 79.3
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 4.1e-133 478.4 304 77.0
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 4.1e-133 478.4 300 79.7
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 4.1e-133 478.4 304 77.3
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 7.0e-133 477.6 304 76.0
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 7.0e-133 477.6 297 78.5
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 9.1e-133 477.2 304 77.0
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 9.1e-133 477.2 304 78.3
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 2.0e-132 476.1 304 77.6
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 2.6e-132 475.7 304 77.0
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 4.5e-132 474.9 304 78.6
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 5.9e-132 474.6 304 77.0
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 7.7e-132 474.2 304 77.0
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 1.0e-131 473.8 304 78.6
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 1.0e-131 473.8 304 78.0
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 1.3e-131 473.4 304 78.9
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 1.7e-131 473.0 304 77.3
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 1.7e-131 473.0 304 77.3
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 2.9e-131 472.2 304 77.6
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 2.9e-131 472.2 304 77.6
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 2.9e-131 472.2 304 78.3
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 3.8e-131 471.9 304 76.6
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 5.5e-130 468.0 304 76.0
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 1.2e-129 466.8 304 76.0
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 1.4e-128 463.4 304 76.3
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 8.8e-128 460.7 300 76.3
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 8.8e-128 460.7 304 75.3
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 5.7e-127 458.0 304 75.0
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 2.2e-126 456.1 304 75.0
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 2.4e-125 452.6 306 72.9
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 3.1e-125 452.2 306 72.5
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 3.1e-125 452.2 301 74.1
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 4.1e-125 451.8 306 73.2
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 4.1e-125 451.8 306 73.2
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 4.1e-125 451.8 304 73.7
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 5.3e-125 451.4 306 73.2
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 9.1e-125 450.7 306 72.9
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 9.1e-125 450.7 278 81.3
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 1.6e-124 449.9 304 72.7
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 7.7e-124 447.6 304 72.7
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 1.0e-123 447.2 299 74.6
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 1.0e-123 447.2 304 73.4
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 2.5e-122 442.6 304 72.4
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 3.2e-122 442.2 304 73.0
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 4.2e-122 441.8 304 73.0
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 2.7e-121 439.1 305 72.8
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 3.6e-121 438.7 304 71.7
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 2.3e-120 436.0 289 76.5
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 5.2e-120 434.9 304 72.4
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 9.4e-114 414.1 301 69.1
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 2.1e-113 412.9 301 67.4
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.8e-112 409.8 262 78.2
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 1.2e-111 407.1 293 71.0
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 2.8e-110 402.5 247 81.8
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 2.4e-109 399.4 304 66.4
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 2.0e-108 396.4 303 65.3
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 1.1e-106 390.6 301 65.1
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 8.0e-105 384.4 266 73.7
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 1.2e-103 380.6 286 67.5
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 4.0e-96 355.5 305 59.3
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 1.2e-95 354.0 242 71.9
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 2.1e-89 333.2 230 72.6
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 2.8e-89 332.8 295 61.0
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 2.8e-89 332.8 292 58.2
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 1.5e-87 327.0 220 75.0
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 4.9e-86 322.0 265 62.6
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 6.0e-84 315.1 256 63.3
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 3.0e-83 312.8 302 54.3
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 6.2e-81 305.1 299 53.8
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 8.1e-81 304.7 196 75.5
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.9e-74 283.5 304 53.6
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 1.8e-72 276.9 302 49.3
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 6.4e-70 268.5 196 67.3
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 6.2e-65 251.9 315 43.8
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 1.5e-63 247.3 214 61.7
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.2e-53 213.0 143 74.8
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 4.2e-53 212.6 144 75.0
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 7.9e-52 208.4 144 72.9
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 1.3e-51 207.6 303 44.2
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 9.6e-50 201.4 317 38.8
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.5e-45 186.8 144 68.8
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 1.5e-42 177.6 164 51.8
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 4.5e-39 166.0 115 69.6
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 7.6e-39 165.2 363 31.4
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.5e-36 156.4 91 79.1
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 2.5e-34 150.2 263 41.4
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 9.7e-34 148.3 313 32.6
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.6e-28 131.0 340 30.0
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 2.3e-27 127.1 80 76.2
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 4.7e-12 76.3 43 81.4


User provided reference genes

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