Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0201731 Rosa chinensis HOM05D008315 ORTHO05D009452 1.1e-110 403.3 201 100.0
RcHm_v2.0_Chr7g0184951 Rosa chinensis HOM05D008315 ORTHO05D009452 1.0e-100 370.2 200 94.5
RcHm_v2.0_Chr6g0254441 Rosa chinensis HOM05D008315 ORTHO05D009452 1.8e-57 226.5 185 67.6
RcHm_v2.0_Chr2g0143311 Rosa chinensis HOM05D012440 ORTHO05D009452 3.9e-23 112.5 160 41.9
RcHm_v2.0_Chr2g0111771 Rosa chinensis HOM05D012440 ORTHO05D009452 2.1e-21 106.7 169 36.7
RcHm_v2.0_Chr6g0260911 Rosa chinensis HOM05D012440 ORTHO05D009452 1.1e-12 77.8 86 41.9
FAN03G0559 Fragaria x ananassa HOM05D012440 ORTHO05D009452 5.3e-12 75.5 96 42.7
RcHm_v2.0_Chr2g0095801 Rosa chinensis HOM05D008315 ORTHO05D009452 2.0e-11 73.6 147 29.9
RcHm_v2.0_Chr5g0015951 Rosa chinensis HOM05D008315 ORTHO05D009452 2.0e-11 73.6 148 29.7
MD03G1101500 Malus domestica HOM05D008315 ORTHO05D009452 4.5e-11 72.4 109 35.8
FAN05G2961 Fragaria x ananassa HOM05D012440 ORTHO05D009452 5.8e-11 72.0 83 44.6
FvH4_6g11351 Fragaria vesca HOM05D008315 ORTHO05D009452 9.9e-11 71.2 179 31.3
FAN01G0827 Fragaria x ananassa HOM05D012440 ORTHO05D009452 2.2e-10 70.1 140 35.0
FAN20G0527 Fragaria x ananassa HOM05D008315 ORTHO05D009452 3.8e-10 69.3 135 31.1
FAN21G3607 Fragaria x ananassa HOM05D012440 ORTHO05D009452 6.4e-10 68.6 140 35.0
FAN21G3482 Fragaria x ananassa HOM05D008315 ORTHO05D009452 8.4e-10 68.2 141 31.9
FAN27G1488 Fragaria x ananassa HOM05D012440 ORTHO05D009452 8.4e-10 68.2 131 34.4
FAN13G1770 Fragaria x ananassa HOM05D012440 ORTHO05D009452 1.1e-09 67.8 113 36.3
FAN19G2826 Fragaria x ananassa HOM05D012440 ORTHO05D009452 1.4e-09 67.4 131 35.9
FAN22G1488 Fragaria x ananassa HOM05D008315 ORTHO05D009452 1.4e-09 67.4 134 31.3
FAN06G4265 Fragaria x ananassa HOM05D012440 ORTHO05D009452 1.9e-09 67.0 131 35.9
FAN25G1520 Fragaria x ananassa HOM05D008315 ORTHO05D009452 2.4e-09 66.6 125 32.0
FAN08G2751 Fragaria x ananassa HOM05D008315 ORTHO05D009452 4.2e-09 65.9 136 31.6
FAN08G0992 Fragaria x ananassa HOM05D008315 ORTHO05D009452 5.4e-09 65.5 163 31.3
RcHm_v2.0_Chr4g0393741 Rosa chinensis HOM05D008315 ORTHO05D009452 7.1e-09 65.1 144 32.6
FAN14G0707 Fragaria x ananassa HOM05D008315 ORTHO05D009452 1.6e-08 63.9 136 30.9
FAN23G0323 Fragaria x ananassa HOM05D012440 ORTHO05D009452 2.1e-08 63.5 90 40.0
FAN04G2114 Fragaria x ananassa HOM05D012440 ORTHO05D009452 2.7e-08 63.2 141 34.8
FAN17G0399 Fragaria x ananassa HOM05D008315 ORTHO05D009452 2.7e-08 63.2 112 34.8
RcHm_v2.0_Chr4g0397391 Rosa chinensis HOM05D008315 ORTHO05D009452 2.7e-08 63.2 132 30.3
RcHm_v2.0_Chr7g0237841 Rosa chinensis HOM05D009706 ORTHO05D009452 2.7e-08 63.2 209 25.8
FvH4_4g00092 Fragaria vesca HOM05D008315 ORTHO05D009452 3.5e-08 62.8 134 33.6
FAN14G2954 Fragaria x ananassa HOM05D008315 ORTHO05D009452 3.5e-08 62.8 130 30.0
FAN20G0161 Fragaria x ananassa HOM05D008315 ORTHO05D009452 3.5e-08 62.8 143 31.5
FAN10G3967 Fragaria x ananassa HOM05D008315 ORTHO05D009452 4.6e-08 62.4 130 30.0
FAN15G1960 Fragaria x ananassa HOM05D008315 ORTHO05D009452 1.0e-07 61.2 166 28.9
FAN09G2320 Fragaria x ananassa HOM05D000769 ORTHO05D003127 8.7e-07 58.2 51 52.9
RcHm_v2.0_Chr2g0145131 Rosa chinensis HOM05D008315 ORTHO05D009452 8.7e-07 58.2 132 30.3
RcHm_v2.0_Chr2g0136581 Rosa chinensis HOM05D008315 ORTHO05D009452 1.1e-06 57.8 133 30.8
FAN04G1611 Fragaria x ananassa HOM05D008315 ORTHO05D009452 1.5e-06 57.4 124 29.8
MD02G1315300 Malus domestica HOM05D008315 ORTHO05D009452 1.5e-06 57.4 136 34.6
FvH4_2g21543 Fragaria vesca HOM05D008315 ORTHO05D009452 1.9e-06 57.0 142 29.6
FAN13G2460 Fragaria x ananassa HOM05D000534 ORTHO05D000389 1.9e-06 57.0 126 28.6
FAN22G0307 Fragaria x ananassa HOM05D012440 ORTHO05D009452 7.4e-06 55.1 107 35.5


User provided reference genes

Program Settings