Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0200891 Rosa chinensis HOM05D027418 ORTHO05D000001 6.8e-43 176.8 82 100.0
RcHm_v2.0_Chr2g0157311 Rosa chinensis HOM05D027418 ORTHO05D000001 2.2e-41 171.8 82 96.3
RcHm_v2.0_Chr2g0123741 Rosa chinensis HOM05D027418 ORTHO05D000001 8.7e-30 133.3 65 93.8
RcHm_v2.0_Chr2g0143411 Rosa chinensis HOM05D000002 ORTHO05D000001 1.1e-11 73.2 44 75.0
RcHm_v2.0_Chr3g0448581 Rosa chinensis HOM05D000015 ORTHO05D000734 1.1e-11 73.2 44 75.0
Rhsim02G0024600 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.9e-11 70.5 64 56.2
Rhsim03G0207400 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.0e-10 68.9 64 53.1
Rhsim08G0128900 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.6e-10 68.6 68 51.5
FvH4_2g15291 Fragaria vesca HOM05D000002 ORTHO05D000001 3.4e-10 68.2 84 53.6
Rhsim01G0112500 Rhododendron simsii HOM05D002151 ORTHO05D002142 7.6e-10 67.0 64 54.7
Rhsim01G0101400 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.9e-09 65.1 64 53.1
Rhsim05G0115400 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.8e-09 64.7 68 50.0
Rhsim06G0083000 Rhododendron simsii HOM05D000002 ORTHO05D000001 8.4e-09 63.5 64 53.1
TAR658G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.1e-08 63.2 49 53.1
TAR576G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 5.5e-08 60.8 50 52.0
Rhsim02G0135400 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.6e-07 57.8 64 50.0
TAR315G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.6e-07 57.8 50 52.0
Thecc.04G240500 Theobroma cacao HOM05D000002 ORTHO05D000001 1.0e-06 56.6 82 43.9
FvH4_5g21591 Fragaria vesca HOM05D000002 ORTHO05D000001 1.3e-06 56.2 30 86.7
Thecc.02G347700 Theobroma cacao HOM05D000002 ORTHO05D000001 1.3e-06 56.2 72 44.4
TAR180G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.3e-06 55.5 42 57.1
Lalb_Chr14g0363271 Lupinus albus HOM05D000002 ORTHO05D000001 6.7e-06 53.9 54 46.3
Thecc.06G134900 Theobroma cacao HOM05D000054 ORTHO05D000286 8.7e-06 53.5 72 41.7


User provided reference genes

Program Settings