Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0198471 Rosa chinensis HOM05D003871 ORTHO05D004621 1.3e-27 125.6 60 100.0
FvH4_7g13330 Fragaria vesca HOM05D003871 ORTHO05D004621 3.4e-07 57.8 26 92.3
FAN01G1876 Fragaria x ananassa HOM05D003871 ORTHO05D004621 3.4e-07 57.8 26 92.3
FAN03G3137 Fragaria x ananassa HOM05D003871 ORTHO05D004621 3.4e-07 57.8 26 92.3
FAN06G4052 Fragaria x ananassa HOM05D003871 ORTHO05D004621 3.4e-07 57.8 26 92.3
FAN10G0206 Fragaria x ananassa HOM05D003871 ORTHO05D004621 3.4e-07 57.8 26 92.3
FAN10G4186 Fragaria x ananassa HOM05D003871 ORTHO05D004621 3.4e-07 57.8 26 92.3
RcHm_v2.0_Chr1g0352641 Rosa chinensis HOM05D003871 ORTHO05D004621 3.4e-07 57.8 26 92.3
SHI13479 Sapria himalayana HOM05D003871 ORTHO05D004621 5.8e-07 57.0 26 88.5
FAN06G3893 Fragaria x ananassa HOM05D003871 ORTHO05D004621 9.9e-07 56.2 26 88.5
Eucgr.E00211 Eucalyptus grandis HOM05D003871 ORTHO05D004621 1.3e-06 55.8 26 88.5
PSO478G4452 Papaver somniferum HOM05D003871 ORTHO05D004621 1.3e-06 55.8 26 88.5
PSO782G0235 Papaver somniferum HOM05D003871 ORTHO05D004621 1.3e-06 55.8 26 88.5
PSO782G3116 Papaver somniferum HOM05D003871 ORTHO05D004621 1.3e-06 55.8 26 88.5
Ca_23740_v3 Cicer arietinum L. HOM05D003871 ORTHO05D004621 1.7e-06 55.5 26 88.5
Ca_23745_v3 Cicer arietinum L. HOM05D003871 ORTHO05D004621 1.7e-06 55.5 26 88.5
Lalb_Chr10g0097451 Lupinus albus HOM05D003871 ORTHO05D004621 1.7e-06 55.5 26 88.5
Psat4g151960 Pisum sativum HOM05D003871 ORTHO05D004621 1.7e-06 55.5 26 88.5
TPR.G17571 Trifolium pratense HOM05D003871 ORTHO05D004621 1.7e-06 55.5 26 88.5
PGR042G2189 Punica granatum HOM05D003871 ORTHO05D004621 2.2e-06 55.1 26 84.6
COL.COLO4_12614 Corchorus olitorius HOM05D003871 ORTHO05D004621 2.9e-06 54.7 26 88.5
Duzib138G1891 Durio zibethinus HOM05D003871 ORTHO05D004621 2.9e-06 54.7 26 88.5
MD01G1050400 Malus domestica HOM05D003871 ORTHO05D004621 2.9e-06 54.7 27 81.5
arahy.Tifrunner.gnm1.ann1.6U8ZH2 Arachis hypogaea HOM05D003871 ORTHO05D004621 3.7e-06 54.3 26 84.6
arahy.Tifrunner.gnm1.ann1.AB99XC Arachis hypogaea HOM05D003871 ORTHO05D004621 3.7e-06 54.3 26 84.6
arahy.Tifrunner.gnm1.ann1.GU6ASX Arachis hypogaea HOM05D003871 ORTHO05D004621 3.7e-06 54.3 28 82.1
arahy.Tifrunner.gnm1.ann1.I68A9W Arachis hypogaea HOM05D003871 ORTHO05D004621 3.7e-06 54.3 26 84.6
arahy.Tifrunner.gnm1.ann1.WVA4TF Arachis hypogaea HOM05D003871 ORTHO05D004621 3.7e-06 54.3 26 84.6
MSTRG.20801 Avicennia marina HOM05D003871 ORTHO05D004621 3.7e-06 54.3 26 84.6
EL10Ac1g00724 Beta vulgaris HOM05D003871 ORTHO05D004621 3.7e-06 54.3 26 84.6
EL10Ac1g00989 Beta vulgaris HOM05D003871 ORTHO05D004621 3.7e-06 54.3 26 84.6
Lalb_Chr17g0339991 Lupinus albus HOM05D003871 ORTHO05D004621 3.7e-06 54.3 26 84.6
MD07G1127800 Malus domestica HOM05D003871 ORTHO05D004621 3.7e-06 54.3 26 84.6
Medtr7g076160 Medicago truncatula HOM05D003871 ORTHO05D004621 3.7e-06 54.3 26 84.6
Medtr8g432630 Medicago truncatula HOM05D003871 ORTHO05D004621 3.7e-06 54.3 26 88.5
Nitab4.5_0004973g0020 Nicotiana tabacum HOM05D003871 ORTHO05D004621 3.7e-06 54.3 26 84.6
Nitab4.5_0005109g0020 Nicotiana tabacum HOM05D003871 ORTHO05D004621 3.7e-06 54.3 26 84.6
Peaxi162Scf00021g00920 Petunia axillaris HOM05D003871 ORTHO05D004621 3.7e-06 54.3 26 84.6
Phvul.010G090500 Phaseolus vulgaris HOM05D003871 ORTHO05D004621 3.7e-06 54.3 26 84.6
Prupe.2G156700 Prunus persica HOM05D003871 ORTHO05D004621 3.7e-06 54.3 26 84.6
SalBow3G3192 Salvia bowleyana HOM05D003871 ORTHO05D004621 3.7e-06 54.3 26 84.6
Sc23g0003210 Simmondsia chinensis HOM05D003871 ORTHO05D004621 3.7e-06 54.3 26 84.6
Solyc01g091650.3 Solanum lycopersicum HOM05D003871 ORTHO05D004621 3.7e-06 54.3 26 84.6
Sopen01g037420 Solanum pennellii HOM05D003871 ORTHO05D004621 3.7e-06 54.3 26 84.6
PGSC0003DMG400027768 Solanum tuberosum HOM05D003871 ORTHO05D004621 3.7e-06 54.3 26 84.6
unitig_22.g5361 Utricularia gibba HOM05D003871 ORTHO05D004621 3.7e-06 54.3 26 84.6
VMungo0331G1218 Vigna mungo HOM05D003871 ORTHO05D004621 3.7e-06 54.3 26 84.6
Hund16957 Selenicereus undatus HOM05D003871 ORTHO05D004621 4.9e-06 53.9 25 88.0
Atru.chr5.417 Acer truncatum HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
CSS0026628 Camellia sinensis var. sinensis HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
CSS0031493 Camellia sinensis var. sinensis HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
CSS0038711 Camellia sinensis var. sinensis HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
CSS0039371 Camellia sinensis var. sinensis HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
CANSAT56G3752 Cannabis sativa HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
CiPaw.02G026000 Carya illinoinensis HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
CiPaw.02G026100 Carya illinoinensis HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
ClCG05G001830 Citrullus lanatus HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
Ciclev10020177m.g Citrus clementina HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
Haze_15212 Corylus avellana HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
MELO3C006142.2 Cucumis melo HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
CsaV3_3G009220 Cucumis sativus L. HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
DCAR_016001 Daucus carota HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
Duzib133G0086 Durio zibethinus HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
ECA234G1945 Erigeron canadensis HOM05D003871 ORTHO05D005816 6.4e-06 53.5 26 84.6
Gohir.A11G085600 Gossypium hirsutum HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
Gohir.A12G104100 Gossypium hirsutum HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
Gohir.D11G089800 Gossypium hirsutum HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
Gohir.D12G107500 Gossypium hirsutum HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
Gorai.007G095800 Gossypium raimondii HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
Gorai.008G117100 Gossypium raimondii HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
HanXRQChr17g0560011 Helianthus annuus HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
Lsat_1_v5_gn_4_37061 Lactuca sativa HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
Manes.05G039500 Manihot esculenta HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
Nn1g01381 Nelumbo nucifera HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
QL08p050260 Quercus lobata HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
Rhsim07G0020500 Rhododendron simsii HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
Thecc.01G366900 Theobroma cacao HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
TAR374G1595 Trochodendron aralioides HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
vmacro13332 Vaccinium macrocarpon HOM05D003871 ORTHO05D004621 6.4e-06 53.5 26 84.6
MSTRG.4874 Avicennia marina HOM05D003871 ORTHO05D004621 8.4e-06 53.1 26 84.6
CAN.G170.26 Capsicum annuum HOM05D003871 ORTHO05D004621 8.4e-06 53.1 26 80.8
Migut.B01700 Erythranthe guttata HOM05D003871 ORTHO05D004621 8.4e-06 53.1 26 84.6
Sabra02G0122500 Salix brachista HOM05D003871 ORTHO05D004621 8.4e-06 53.1 25 84.0
TWI23G1177 Tripterygium wilfordii HOM05D003871 ORTHO05D004621 8.4e-06 53.1 26 84.6


User provided reference genes

Program Settings