Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0197861 Rosa chinensis HOM05D000051 ORTHO05D000015 6.0e-86 320.9 169 100.0
RcHm_v2.0_Chr7g0197881 Rosa chinensis HOM05D000051 ORTHO05D000015 3.3e-52 208.8 140 77.1
FvH4_5g08740 Fragaria vesca HOM05D000051 ORTHO05D000015 6.1e-46 188.0 131 70.2
FvH4_5g02221 Fragaria vesca HOM05D000051 ORTHO05D000015 2.2e-43 179.5 134 69.4
FvH4_5g02230 Fragaria vesca HOM05D000051 ORTHO05D000015 2.5e-39 166.0 128 69.5
FvH4_5g02290 Fragaria vesca HOM05D000051 ORTHO05D000015 3.3e-39 165.6 128 64.8
FAN18G3141 Fragaria x ananassa HOM05D000051 ORTHO05D000015 3.3e-39 165.6 128 64.8
FAN18G3549 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.2e-36 157.1 128 65.6
FvH4_5g02210 Fragaria vesca HOM05D000051 ORTHO05D000015 3.7e-35 152.1 128 64.1
FvH4_5g02280 Fragaria vesca HOM05D000051 ORTHO05D000015 4.5e-33 145.2 139 58.3
FAN13G1667 Fragaria x ananassa HOM05D000051 ORTHO05D000015 4.5e-33 145.2 110 68.2
FAN13G3121 Fragaria x ananassa HOM05D003102 ORTHO05D000015 7.5e-28 127.9 128 53.9
RcHm_v2.0_Chr7g0197891 Rosa chinensis HOM05D000051 ORTHO05D000015 2.2e-27 126.3 76 81.6
RcHm_v2.0_Chr7g0197921 Rosa chinensis HOM05D000051 ORTHO05D000015 2.0e-25 119.8 93 68.8
FvH4_5g02220 Fragaria vesca HOM05D000051 ORTHO05D000015 3.1e-21 105.9 82 63.4
Prupe.4G161200 Prunus persica HOM05D000051 ORTHO05D000015 5.8e-20 101.7 130 43.1
Prupe.4G161300 Prunus persica HOM05D000051 ORTHO05D000015 9.8e-20 100.9 137 46.7
MD03G1276300 Malus domestica HOM05D000051 ORTHO05D000015 2.7e-17 92.8 131 44.3
FAN04G3051 Fragaria x ananassa HOM05D004737 ORTHO05D005623 4.6e-17 92.0 91 53.8
MD11G1265300 Malus domestica HOM05D000051 ORTHO05D000015 6.0e-17 91.7 123 44.7
MD11G1265000 Malus domestica HOM05D000051 ORTHO05D000015 1.7e-16 90.1 133 44.4
Prupe.4G160800 Prunus persica HOM05D000051 ORTHO05D000015 2.3e-16 89.7 127 44.9
MD03G1276400 Malus domestica HOM05D000051 ORTHO05D000015 3.0e-16 89.4 126 44.4
Prupe.4G160900 Prunus persica HOM05D000051 ORTHO05D000015 5.1e-16 88.6 123 43.9
FvH4_6g08520 Fragaria vesca HOM05D000051 ORTHO05D000015 1.9e-15 86.7 127 48.0
FAN14G1913 Fragaria x ananassa HOM05D000051 ORTHO05D000015 4.3e-15 85.5 130 41.5
MD11G1265100 Malus domestica HOM05D000051 ORTHO05D000015 3.6e-14 82.4 135 41.5
FAN14G1262 Fragaria x ananassa HOM05D005826 ORTHO05D004357 1.1e-13 80.9 127 46.5
FvH4_2g40800 Fragaria vesca HOM05D000051 ORTHO05D000015 4.1e-10 68.9 133 36.1
MD11G1256200 Malus domestica HOM05D000051 ORTHO05D000015 4.1e-10 68.9 129 36.4
RcHm_v2.0_Chr5g0030631 Rosa chinensis HOM05D000051 ORTHO05D000015 4.1e-10 68.9 109 43.1
MD03G1252900 Malus domestica HOM05D000051 ORTHO05D000015 4.6e-09 65.5 136 37.5
FAN11G0785 Fragaria x ananassa HOM05D000051 ORTHO05D045903 7.8e-09 64.7 100 43.0
MD11G1266800 Malus domestica HOM05D000051 ORTHO05D000015 1.3e-08 63.9 135 37.8
RcHm_v2.0_Chr4g0417391 Rosa chinensis HOM05D000051 ORTHO05D000015 2.3e-08 63.2 120 35.0
Prupe.4G158800 Prunus persica HOM05D000051 ORTHO05D000015 3.0e-08 62.8 130 34.6
FvH4_1g00860 Fragaria vesca HOM05D000051 ORTHO05D000015 6.6e-08 61.6 132 34.8
FAN23G2828 Fragaria x ananassa HOM05D000051 ORTHO05D000015 6.6e-08 61.6 123 35.0
FAN28G2792 Fragaria x ananassa HOM05D000051 ORTHO05D000015 6.6e-08 61.6 132 34.8
RcHm_v2.0_Chr5g0040081 Rosa chinensis HOM05D000051 ORTHO05D000015 6.6e-08 61.6 118 37.3
FAN06G4287 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.1e-07 60.8 124 37.1
MD03G1253700 Malus domestica HOM05D000051 ORTHO05D000015 1.1e-07 60.8 118 36.4
FAN03G0619 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.9e-07 60.1 137 35.8
FvH4_3g18021 Fragaria vesca HOM05D000051 ORTHO05D000015 2.5e-07 59.7 123 34.1
FAN11G1423 Fragaria x ananassa HOM05D000051 ORTHO05D008292 2.5e-07 59.7 123 34.1
FAN26G3357 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.5e-07 59.7 123 33.3
MD03G1253500 Malus domestica HOM05D000051 ORTHO05D000015 2.5e-07 59.7 136 36.0
RcHm_v2.0_Chr7g0237071 Rosa chinensis HOM05D000051 ORTHO05D000015 3.3e-07 59.3 120 40.0
FvH4_7g28000 Fragaria vesca HOM05D000051 ORTHO05D000015 4.3e-07 58.9 124 36.3
MD11G1275600 Malus domestica HOM05D000051 ORTHO05D000015 4.3e-07 58.9 118 38.1
Prupe.4G158900 Prunus persica HOM05D000051 ORTHO05D000015 7.3e-07 58.2 120 39.2
Prupe.4G161000 Prunus persica HOM05D000051 ORTHO05D000015 9.5e-07 57.8 102 39.2
FAN28G0970 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.2e-06 57.4 123 33.3
RcHm_v2.0_Chr5g0028461 Rosa chinensis HOM05D000051 ORTHO05D000015 1.2e-06 57.4 118 38.1
FAN20G2836 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.6e-06 57.0 128 35.2
FvH4_1g01500 Fragaria vesca HOM05D000051 ORTHO05D000015 2.1e-06 56.6 123 33.3
MD11G1267000 Malus domestica HOM05D000051 ORTHO05D000015 2.8e-06 56.2 120 35.8
FvH4_3g33400 Fragaria vesca HOM05D000051 ORTHO05D000015 4.7e-06 55.5 138 31.9
Cc01_g01520 Coffea canephora HOM05D000051 ORTHO05D000015 8.1e-06 54.7 134 29.9
RcHm_v2.0_Chr6g0304711 Rosa chinensis HOM05D000051 ORTHO05D000015 8.1e-06 54.7 139 32.4


User provided reference genes

Program Settings