Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0197741 Rosa chinensis HOM05D005215 ORTHO05D006382 3.2e-121 438.3 211 100.0
FAN13G0513 Fragaria x ananassa HOM05D005215 ORTHO05D006382 3.7e-109 398.3 211 90.5
FvH4_5g02370 Fragaria vesca HOM05D005215 ORTHO05D006382 1.8e-108 396.0 211 90.0
FAN04G2904 Fragaria x ananassa HOM05D005215 ORTHO05D006382 2.4e-108 395.6 211 90.0
FAN18G1091 Fragaria x ananassa HOM05D005215 ORTHO05D006382 5.4e-108 394.4 211 89.6
Prupe.2G069900 Prunus persica HOM05D005215 ORTHO05D006382 2.4e-100 369.0 203 85.2
Atru.chr12.1046 Acer truncatum HOM05D005215 ORTHO05D006382 3.2e-100 368.6 213 81.2
Dinv11822 Davidia involucrata HOM05D005215 ORTHO05D006382 5.4e-100 367.9 213 81.2
CSS0044679 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 2.7e-99 365.5 212 80.7
ClCG08G008310 Citrullus lanatus HOM05D005215 ORTHO05D006382 2.7e-99 365.5 203 84.2
Cc02_g09580 Coffea canephora HOM05D005215 ORTHO05D006382 2.7e-99 365.5 201 83.6
MD02G1262000 Malus domestica HOM05D005215 ORTHO05D006382 3.5e-99 365.2 213 79.8
arahy.Tifrunner.gnm1.ann1.E5H8ET Arachis hypogaea HOM05D005215 ORTHO05D006382 6.0e-99 364.4 211 80.6
SGA_v2.0_scaffold329G48861 Striga asiatica HOM05D005215 ORTHO05D006382 6.0e-99 364.4 203 82.3
QL04p046761 Quercus lobata HOM05D005215 ORTHO05D006382 1.3e-98 363.2 211 80.1
CiPaw.13G040900 Carya illinoinensis HOM05D005215 ORTHO05D006382 1.7e-98 362.8 213 81.7
Hma1.2p1_0756F.1_g213190 Hydrangea macrophylla HOM05D005215 ORTHO05D006382 1.7e-98 362.8 213 80.8
PGR044G2198 Punica granatum HOM05D005215 ORTHO05D006382 3.0e-98 362.1 203 81.8
TWI15G0816 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 3.9e-98 361.7 201 82.1
MBI01_g04055_MAGBIO Magnolia biondii HOM05D005215 ORTHO05D006382 5.0e-98 361.3 199 82.9
Aqoxy4G02757 Aquilegia oxysepala HOM05D005215 ORTHO05D006382 1.9e-97 359.4 201 82.6
Ciclev10016681m.g Citrus clementina HOM05D005215 ORTHO05D006382 1.9e-97 359.4 211 79.1
Actinidia18624 Actinidia chinensis HOM05D005215 ORTHO05D006382 2.5e-97 359.0 198 82.8
Thecc.10G114600 Theobroma cacao HOM05D005215 ORTHO05D006382 3.3e-97 358.6 213 80.8
Nn6g34863 Nelumbo nucifera HOM05D005215 ORTHO05D006382 7.3e-97 357.5 210 80.0
SalBow3G3150 Salvia bowleyana HOM05D005215 ORTHO05D006382 7.3e-97 357.5 201 82.1
CiPaw.14G033600 Carya illinoinensis HOM05D005215 ORTHO05D006382 1.2e-96 356.7 213 79.3
EL10Ac4g07754 Beta vulgaris HOM05D005215 ORTHO05D006382 2.1e-96 355.9 211 78.2
FAN08G2650 Fragaria x ananassa HOM05D005215 ORTHO05D006382 2.1e-96 355.9 212 82.5
Lj5g0024589 Lotus japonicus HOM05D005215 ORTHO05D006382 2.8e-96 355.5 211 79.1
Cpa.g.sc704.2 Carica papaya HOM05D005215 ORTHO05D006382 3.6e-96 355.1 193 84.5
vmacro07260 Vaccinium macrocarpon HOM05D005215 ORTHO05D006382 6.2e-96 354.4 214 78.5
CSS0033765 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 1.1e-95 353.6 213 79.3
Lsat_1_v5_gn_2_104201 Lactuca sativa HOM05D005215 ORTHO05D006382 1.1e-95 353.6 203 79.8
Nitab4.5_0009484g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 1.1e-95 353.6 199 82.4
TAR623G0377 Trochodendron aralioides HOM05D005215 ORTHO05D006382 1.4e-95 353.2 213 78.9
MD07G1058400 Malus domestica HOM05D005215 ORTHO05D006382 1.8e-95 352.8 203 80.3
arahy.Tifrunner.gnm1.ann1.KL5LPC Arachis hypogaea HOM05D005215 ORTHO05D006382 3.1e-95 352.1 234 72.6
Migut.F00868 Erythranthe guttata HOM05D005215 ORTHO05D006382 3.1e-95 352.1 211 79.6
Manes.18G138580 Manihot esculenta HOM05D005215 ORTHO05D006382 3.1e-95 352.1 213 78.9
CARHR133400 Cardamine hirsuta HOM05D005215 ORTHO05D006382 4.0e-95 351.7 210 75.7
Duzib114G0243 Durio zibethinus HOM05D005215 ORTHO05D006382 4.0e-95 351.7 213 78.9
Nitab4.5_0002586g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 5.2e-95 351.3 201 81.6
Sed0008445 Sechium edule HOM05D005215 ORTHO05D006382 5.2e-95 351.3 201 81.1
TPR.G2443 Trifolium pratense HOM05D005215 ORTHO05D006382 5.2e-95 351.3 203 78.3
TWI63G0161 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 5.2e-95 351.3 203 78.3
HPP92_020962 Vanilla planifolia HOM05D005215 ORTHO05D006382 5.2e-95 351.3 199 78.4
Migut.C00229 Erythranthe guttata HOM05D005215 ORTHO05D006382 6.8e-95 350.9 211 79.6
Lsat_1_v5_gn_0_8140 Lactuca sativa HOM05D005215 ORTHO05D006382 6.8e-95 350.9 203 79.8
CANSAT56G3442 Cannabis sativa HOM05D005215 ORTHO05D006382 1.2e-94 350.1 213 78.4
AUR62042083 Chenopodium quinoa HOM05D005215 ORTHO05D006382 1.5e-94 349.7 200 78.0
ECA232G3141 Erigeron canadensis HOM05D005215 ORTHO05D006382 2.0e-94 349.4 203 78.8
Gorai.009G303500 Gossypium raimondii HOM05D005215 ORTHO05D006382 2.0e-94 349.4 213 78.9
Peaxi162Scf00125g00233 Petunia axillaris HOM05D005215 ORTHO05D006382 2.6e-94 349.0 201 81.1
Eucgr.J00268 Eucalyptus grandis HOM05D005215 ORTHO05D006382 4.4e-94 348.2 203 80.3
CAN.G1417.3 Capsicum annuum HOM05D005215 ORTHO05D006382 5.8e-94 347.8 201 79.6
Gohir.D05G288400 Gossypium hirsutum HOM05D005215 ORTHO05D006382 7.5e-94 347.4 213 78.4
Hund06789 Selenicereus undatus HOM05D005215 ORTHO05D006382 7.5e-94 347.4 211 76.8
GSVIVG01010684001 Vitis vinifera HOM05D005215 ORTHO05D006382 7.5e-94 347.4 204 79.4
Psat0s1904g0160 Pisum sativum HOM05D005215 ORTHO05D006382 9.8e-94 347.1 203 78.8
Solyc11g006770.3 Solanum lycopersicum HOM05D005215 ORTHO05D006382 9.8e-94 347.1 199 80.4
Sopen11g002700 Solanum pennellii HOM05D005215 ORTHO05D006382 9.8e-94 347.1 199 80.4
PGSC0003DMG400023967 Solanum tuberosum HOM05D005215 ORTHO05D006382 9.8e-94 347.1 199 80.4
Actinidia34727 Actinidia chinensis HOM05D005215 ORTHO05D006382 1.3e-93 346.7 213 76.5
CDE06G1220 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 1.3e-93 346.7 208 76.4
Gohir.A05G287300 Gossypium hirsutum HOM05D005215 ORTHO05D006382 1.3e-93 346.7 213 78.4
Migut.B01734 Erythranthe guttata HOM05D005215 ORTHO05D006382 1.7e-93 346.3 211 78.2
Medtr1g111860 Medicago truncatula HOM05D005215 ORTHO05D006382 2.2e-93 345.9 203 77.8
HanXRQChr11g0321671 Helianthus annuus HOM05D005215 ORTHO05D006382 2.9e-93 345.5 203 78.3
PSO339G4522 Papaver somniferum HOM05D005215 ORTHO05D006382 2.9e-93 345.5 213 76.5
BraA03t11391Z Brassica rapa HOM05D005215 ORTHO05D006382 4.9e-93 344.7 196 78.6
Carub.0004s2071 Capsella rubella HOM05D005215 ORTHO05D006382 4.9e-93 344.7 198 78.3
TAR369G1081 Trochodendron aralioides HOM05D005215 ORTHO05D006382 6.4e-93 344.4 213 76.1
BcaC02g07452 Brassica carinata HOM05D005215 ORTHO05D006382 8.3e-93 344.0 199 77.9
Sp4g21070 Schrenkiella parvula HOM05D005215 ORTHO05D006382 8.3e-93 344.0 199 77.9
CDE08G0922 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 1.1e-92 343.6 208 75.5
AT2G38710 Arabidopsis thaliana HOM05D005215 ORTHO05D006382 1.4e-92 343.2 199 77.9
HanXRQChr07g0194041 Helianthus annuus HOM05D005215 ORTHO05D006382 2.4e-92 342.4 203 77.3
Potri.010G240000 Populus trichocarpa HOM05D005215 ORTHO05D006382 2.4e-92 342.4 213 76.5
THA.LOC104801304 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 2.4e-92 342.4 208 76.9
AL4G36010 Arabidopsis lyrata HOM05D005215 ORTHO05D006382 3.2e-92 342.0 199 77.4
A03p21550 Brassica napus HOM05D005215 ORTHO05D006382 3.2e-92 342.0 196 78.1
ATR0776G030 Amborella trichopoda HOM05D005215 ORTHO05D006382 5.4e-92 341.3 209 79.4
BolC3t14941H Brassica oleracea HOM05D005215 ORTHO05D006382 5.4e-92 341.3 196 77.6
Sed0014754 Sechium edule HOM05D005215 ORTHO05D006382 7.1e-92 340.9 199 78.9
BraA04t18418Z Brassica rapa HOM05D005215 ORTHO05D006382 9.2e-92 340.5 199 76.9
Thhalv10017213m.g Eutrema salsugineum HOM05D005215 ORTHO05D006382 9.2e-92 340.5 210 74.8
C03p25540 Brassica napus HOM05D005215 ORTHO05D006382 1.6e-91 339.7 196 77.0
Sc06g0002380 Simmondsia chinensis HOM05D005215 ORTHO05D006382 1.6e-91 339.7 201 78.1
THA.LOC104811337 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 1.6e-91 339.7 208 75.5
C04p66830 Brassica napus HOM05D005215 ORTHO05D006382 6.0e-91 337.8 199 75.9
Sabra08G0012600 Salix brachista HOM05D005215 ORTHO05D006382 6.0e-91 337.8 201 78.1
MSTRG.27562 Avicennia marina HOM05D005215 ORTHO05D006382 7.8e-91 337.4 201 76.1
BolC4t28184H Brassica oleracea HOM05D005215 ORTHO05D006382 7.8e-91 337.4 199 75.9
Glyma.20G074500 Glycine max HOM05D005215 ORTHO05D006382 1.7e-90 336.3 201 77.6
Potri.008G019200 Populus trichocarpa HOM05D005215 ORTHO05D006382 2.3e-90 335.9 203 75.9
VMungo0720G2906 Vigna mungo HOM05D005215 ORTHO05D006382 2.3e-90 335.9 201 76.1
Os10g0573100 Oryza sativa ssp. japonica HOM05D005215 ORTHO05D006382 3.0e-90 335.5 201 75.6
PSO384G1677 Papaver somniferum HOM05D005215 ORTHO05D006382 3.0e-90 335.5 213 74.2
Aa31LG5G21000 Aethionema arabicum HOM05D005215 ORTHO05D006382 5.1e-90 334.7 211 72.5
Glyma.10G123100 Glycine max HOM05D005215 ORTHO05D006382 6.6e-90 334.3 201 76.6
Oeu030225.2 Olea europaea HOM05D005215 ORTHO05D006382 9.5e-89 330.5 210 75.7
DCAR_006336 Daucus carota HOM05D005215 ORTHO05D006382 1.2e-88 330.1 204 76.0
SEGI_01358 Sequoiadendron giganteum HOM05D005215 ORTHO05D006382 3.6e-88 328.6 200 75.0
Zm00001eb390460 Zea mays HOM05D005215 ORTHO05D006382 4.7e-88 328.2 203 74.4
PSO339G6572 Papaver somniferum HOM05D005215 ORTHO05D006382 8.1e-88 327.4 204 74.0
Pp3c3_21710 Physcomitrium patens HOM05D005215 ORTHO05D006382 8.1e-88 327.4 200 74.5
Phvul.007G235600 Phaseolus vulgaris HOM05D005215 ORTHO05D006382 1.4e-87 326.6 211 72.5
AUR62041518 Chenopodium quinoa HOM05D005215 ORTHO05D006382 2.6e-86 322.4 220 67.7
AagrBONN_evm.TU.Sc2ySwM_117.3510 Anthoceros agrestis HOM05D005215 ORTHO05D006382 5.8e-86 321.2 196 74.0
SMO331G0011 Selaginella moellendorffii HOM05D005215 ORTHO05D006382 5.8e-86 321.2 199 73.4
Mapoly0059s0056 Marchantia polymorpha HOM05D005215 ORTHO05D006382 1.3e-85 320.1 199 73.9
PSO801G0072 Papaver somniferum HOM05D005215 ORTHO05D006382 1.7e-85 319.7 204 72.5
Haze_03299 Corylus avellana HOM05D005215 ORTHO05D006382 3.7e-85 318.5 253 64.8
Dinv10934 Davidia involucrata HOM05D005215 ORTHO05D006382 5.4e-84 314.7 166 86.1
Oeu026607.3 Olea europaea HOM05D005215 ORTHO05D006382 1.0e-82 310.5 287 55.7
Ah.11g047220 Amaranthus hybridus HOM05D005215 ORTHO05D006382 1.2e-80 303.5 200 70.5
Lj3A925G70 Lonicera japonica HOM05D005215 ORTHO05D006382 6.8e-79 297.7 178 80.9
MELO3C019899.2 Cucumis melo HOM05D005215 ORTHO05D006382 1.7e-77 293.1 165 83.0
Lalb_Chr06g0166341 Lupinus albus HOM05D005215 ORTHO05D006382 1.3e-69 266.9 145 83.4
Lalb_Chr02g0146211 Lupinus albus HOM05D005215 ORTHO05D006382 4.9e-69 265.0 145 81.4
COL.COLO4_05151 Corchorus olitorius HOM05D005215 ORTHO05D006382 6.0e-67 258.1 429 39.4
Pp3c4_19060 Physcomitrium patens HOM05D005215 ORTHO05D006382 7.9e-67 257.7 172 70.9
A04p29510 Brassica napus HOM05D005215 ORTHO05D006382 3.9e-66 255.4 145 77.2
Nn2g14190 Nelumbo nucifera HOM05D005215 ORTHO05D006382 2.5e-65 252.7 201 63.2
CsaV3_6G004280 Cucumis sativus L. HOM05D005215 ORTHO05D006382 1.5e-54 216.9 113 86.7
CBR_g39962 Chara braunii HOM05D005215 ORTHO05D006382 3.4e-54 215.7 137 72.3
Cre03.g146687 Chlamydomonas reinhardtii HOM05D005215 ORTHO05D006382 6.2e-48 194.9 195 49.7
Ca_25655_v3 Cicer arietinum L. HOM05D000113 ORTHO05D001798 1.4e-47 193.7 125 72.8
Haze_26289 Corylus avellana HOM05D005215 ORTHO05D006382 5.0e-45 185.3 198 47.0
Potri.008G019325 Populus trichocarpa HOM05D005215 ORTHO05D006382 2.5e-41 172.9 109 75.2
MCO01G395 Micromonas commoda HOM05D005215 ORTHO05D006382 1.5e-38 163.7 195 42.6
PRCOL_00005793 Prasinoderma coloniale HOM05D005215 ORTHO05D006382 3.4e-38 162.5 140 57.1
unitig_88.g27810 Utricularia gibba HOM05D005215 ORTHO05D006382 8.5e-37 157.9 88 77.3
Dinv02216 Davidia involucrata HOM05D005215 ORTHO05D006382 2.2e-32 143.3 73 84.9
Cfa010328 Carpinus fangiana HOM05D005215 ORTHO05D006382 4.8e-32 142.1 108 67.6
BcaNung04832 Brassica carinata HOM05D005215 ORTHO05D006382 1.1e-31 141.0 87 74.7
Sc06g0000010 Simmondsia chinensis HOM05D005215 ORTHO05D006382 1.1e-31 141.0 89 75.3
Sabra16G0322800 Salix brachista HOM05D005215 ORTHO05D006382 4.0e-18 95.9 72 65.3
unitig_88.g27811 Utricularia gibba HOM05D005215 ORTHO05D006382 5.7e-17 92.0 57 73.7
Lalb_Chr06g0166351 Lupinus albus HOM05D005215 ORTHO05D006382 7.5e-17 91.7 69 65.2
Lalb_Chr02g0146221 Lupinus albus HOM05D005215 ORTHO05D006382 1.6e-14 84.0 66 68.2
Actinidia27053 Actinidia chinensis HOM05D005215 ORTHO05D006382 1.3e-13 80.9 59 69.5
Migut.F00867 Erythranthe guttata HOM05D012249 ORTHO05D014194 3.4e-09 66.2 35 80.0
GSVIVG01037606001 Vitis vinifera HOM05D005215 ORTHO05D014194 2.8e-08 63.2 35 68.6
Peaxi162Scf00959g00416 Petunia axillaris HOM05D005215 ORTHO05D006382 4.8e-08 62.4 40 72.5
Peaxi162Scf00959g00417 Petunia axillaris HOM05D005215 ORTHO05D306904 4.8e-08 62.4 54 68.5
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 3.1e-07 59.7 32 84.4


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