Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0197371 Rosa chinensis HOM05D000761 ORTHO05D001062 2.0e-24 114.8 51 100.0
RcHm_v2.0_Chr4g0424991 Rosa chinensis HOM05D000761 ORTHO05D001062 1.8e-09 65.1 34 79.4
Prupe.2G254500 Prunus persica HOM05D000761 ORTHO05D001062 6.9e-09 63.2 34 73.5
RcHm_v2.0_Chr1g0370831 Rosa chinensis HOM05D000761 ORTHO05D001062 9.0e-09 62.8 34 76.5
FAN03G2092 Fragaria x ananassa HOM05D000761 ORTHO05D001062 2.6e-08 61.2 34 73.5
FAN10G1767 Fragaria x ananassa HOM05D000761 ORTHO05D001062 2.6e-08 61.2 34 73.5
MD01G1156900 Malus domestica HOM05D000761 ORTHO05D001062 4.4e-08 60.5 34 70.6
Haze_17262 Corylus avellana HOM05D000761 ORTHO05D001062 9.9e-08 59.3 34 70.6
FvH4_7g24950 Fragaria vesca HOM05D000761 ORTHO05D001062 9.9e-08 59.3 34 70.6
FAN01G0612 Fragaria x ananassa HOM05D000761 ORTHO05D001062 9.9e-08 59.3 34 70.6
FAN06G4811 Fragaria x ananassa HOM05D000761 ORTHO05D001062 9.9e-08 59.3 34 70.6
Duzib170G0959 Durio zibethinus HOM05D000761 ORTHO05D001062 1.7e-07 58.5 34 70.6
Eucgr.G03081 Eucalyptus grandis HOM05D000761 ORTHO05D001062 1.7e-07 58.5 34 70.6
Duzib128G0627 Durio zibethinus HOM05D000761 ORTHO05D001062 2.9e-07 57.8 34 67.6
Gorai.005G088200 Gossypium raimondii HOM05D000761 ORTHO05D001062 2.9e-07 57.8 34 70.6
CSS0014908 Camellia sinensis var. sinensis HOM05D000761 ORTHO05D001062 3.8e-07 57.4 34 70.6
CSS0038507 Camellia sinensis var. sinensis HOM05D000761 ORTHO05D001062 3.8e-07 57.4 34 70.6
Hma1.2p1_0146F.1_g065510 Hydrangea macrophylla HOM05D000761 ORTHO05D001062 8.4e-07 56.2 34 67.6
Cpa.g.sc19.143 Carica papaya HOM05D000761 ORTHO05D001062 1.1e-06 55.8 34 64.7
TAR623G0384 Trochodendron aralioides HOM05D000761 ORTHO05D001062 1.1e-06 55.8 33 69.7
Potri.009G075400 Populus trichocarpa HOM05D000761 ORTHO05D001062 2.4e-06 54.7 34 67.6
TWI09G1449 Tripterygium wilfordii HOM05D000761 ORTHO05D001062 2.4e-06 54.7 34 61.8
Gohir.A08G202500 Gossypium hirsutum HOM05D000761 ORTHO05D001062 3.2e-06 54.3 34 67.6
Gohir.D05G108300 Gossypium hirsutum HOM05D000761 ORTHO05D001062 3.2e-06 54.3 34 64.7
Gohir.D08G219400 Gossypium hirsutum HOM05D000761 ORTHO05D001062 3.2e-06 54.3 34 67.6
Gohir.D11G179700 Gossypium hirsutum HOM05D000761 ORTHO05D001062 3.2e-06 54.3 34 67.6
Gohir.D12G024900 Gossypium hirsutum HOM05D000761 ORTHO05D001062 3.2e-06 54.3 34 67.6
Gorai.004G233500 Gossypium raimondii HOM05D000761 ORTHO05D001062 3.2e-06 54.3 34 67.6
Gorai.005G161700 Gossypium raimondii HOM05D000761 ORTHO05D001062 3.2e-06 54.3 34 67.6
Gorai.009G112500 Gossypium raimondii HOM05D000761 ORTHO05D001062 3.2e-06 54.3 34 64.7
CiPaw.02G195000 Carya illinoinensis HOM05D000761 ORTHO05D001062 4.2e-06 53.9 33 63.6
Duzib168G2162 Durio zibethinus HOM05D000761 ORTHO05D001062 4.2e-06 53.9 34 67.6
Sabra09G0057300 Salix brachista HOM05D000761 ORTHO05D001062 4.2e-06 53.9 34 67.6
Thecc.09G354000 Theobroma cacao HOM05D000761 ORTHO05D001062 5.4e-06 53.5 34 64.7
CiPaw.14G056300 Carya illinoinensis HOM05D000761 ORTHO05D001062 7.1e-06 53.1 34 58.8
CsaV3_6G016000 Cucumis sativus L. HOM05D000761 ORTHO05D001062 7.1e-06 53.1 33 66.7
ClCG02G019380 Citrullus lanatus HOM05D000761 ORTHO05D001062 9.3e-06 52.8 33 63.6
MELO3C018371.2 Cucumis melo HOM05D000761 ORTHO05D001062 9.3e-06 52.8 34 67.6
Hma1.2p1_0841F.1_g226780 Hydrangea macrophylla HOM05D000761 ORTHO05D001062 9.3e-06 52.8 35 68.6
Manes.18G136200 Manihot esculenta HOM05D000761 ORTHO05D001062 9.3e-06 52.8 33 69.7
TWI73G0012 Tripterygium wilfordii HOM05D000761 ORTHO05D001062 9.3e-06 52.8 34 61.8


User provided reference genes

Program Settings