Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0196091 Rosa chinensis HOM05D003548 ORTHO05D004066 1.7e-38 162.2 82 100.0
FAN04G2241 Fragaria x ananassa HOM05D003548 ORTHO05D004066 6.2e-28 127.1 81 81.5
FAN08G0634 Fragaria x ananassa HOM05D003548 ORTHO05D029492 1.8e-27 125.6 82 81.7
FAN04G1462 Fragaria x ananassa HOM05D003548 ORTHO05D004066 4.0e-27 124.4 82 80.5
FAN13G0102 Fragaria x ananassa HOM05D003548 ORTHO05D004066 5.3e-27 124.0 82 80.5
FAN18G1037 Fragaria x ananassa HOM05D003548 ORTHO05D004066 1.5e-26 122.5 82 79.3
FvH4_5g03650 Fragaria vesca HOM05D003548 ORTHO05D004066 3.4e-26 121.3 82 78.0
FAN13G1218 Fragaria x ananassa HOM05D003548 ORTHO05D004066 4.2e-24 114.4 81 75.3
MD06G1096100 Malus domestica HOM05D003548 ORTHO05D004066 1.0e-17 93.2 82 62.2
Prupe.5G110700 Prunus persica HOM05D003548 ORTHO05D004066 7.9e-15 83.6 83 60.2
MD14G1116300 Malus domestica HOM05D003548 ORTHO05D004066 1.3e-14 82.8 82 56.1
Duzib205G0585 Durio zibethinus HOM05D003548 ORTHO05D004066 1.0e-09 66.6 91 46.2
Haze_08718 Corylus avellana HOM05D003548 ORTHO05D004066 5.0e-09 64.3 86 48.8
Cfa012267 Carpinus fangiana HOM05D003548 ORTHO05D004066 1.9e-08 62.4 85 48.2
Gohir.A09G191100 Gossypium hirsutum HOM05D003548 ORTHO05D004066 3.2e-08 61.6 90 44.4
Manes.02G014900 Manihot esculenta HOM05D003548 ORTHO05D004066 4.2e-08 61.2 94 43.6
Duzib068G0600 Durio zibethinus HOM05D003548 ORTHO05D004066 7.1e-08 60.5 92 46.7
Thecc.03G289200 Theobroma cacao HOM05D003548 ORTHO05D004066 7.1e-08 60.5 91 44.0
Sabra01G0072500 Salix brachista HOM05D003548 ORTHO05D004066 1.2e-07 59.7 93 41.9
VMungo0251G1700 Vigna mungo HOM05D003548 ORTHO05D004066 1.2e-07 59.7 93 44.1
Glyma.05G213300 Glycine max HOM05D003548 ORTHO05D004066 2.1e-07 58.9 51 56.9
Ca_10964_v3 Cicer arietinum L. HOM05D003548 ORTHO05D004066 2.7e-07 58.5 89 44.9
Ciclev10019140m.g Citrus clementina HOM05D003548 ORTHO05D004066 2.7e-07 58.5 94 45.7
Gohir.D09G185600 Gossypium hirsutum HOM05D003548 ORTHO05D004066 2.7e-07 58.5 90 43.3
Gorai.006G208300 Gossypium raimondii HOM05D003548 ORTHO05D004066 2.7e-07 58.5 90 43.3
Potri.001G097200 Populus trichocarpa HOM05D003548 ORTHO05D004066 2.7e-07 58.5 94 42.6
Glyma.08G019800 Glycine max HOM05D003548 ORTHO05D004066 1.0e-06 56.6 90 42.2
Gohir.A02G103700 Gossypium hirsutum HOM05D003548 ORTHO05D004066 1.3e-06 56.2 87 43.7
Potri.003G134200 Populus trichocarpa HOM05D003548 ORTHO05D004066 1.8e-06 55.8 94 38.3
Gohir.D03G080200 Gossypium hirsutum HOM05D003548 ORTHO05D004066 2.3e-06 55.5 87 41.4
Gorai.003G083700 Gossypium raimondii HOM05D003548 ORTHO05D004066 3.0e-06 55.1 87 41.4
Sopen08g004030 Solanum pennellii HOM05D003548 ORTHO05D004066 3.0e-06 55.1 81 42.0
arahy.Tifrunner.gnm1.ann1.36D870 Arachis hypogaea HOM05D003548 ORTHO05D004066 5.1e-06 54.3 52 53.8
CSS0034195 Camellia sinensis var. sinensis HOM05D003548 ORTHO05D004066 5.1e-06 54.3 56 53.6
Lalb_Chr16g0390341 Lupinus albus HOM05D003548 ORTHO05D004066 6.7e-06 53.9 52 57.7
Atru.chr9.2080 Acer truncatum HOM05D003548 ORTHO05D004066 8.7e-06 53.5 57 54.4
arahy.Tifrunner.gnm1.ann1.59PT6M Arachis hypogaea HOM05D003548 ORTHO05D004066 8.7e-06 53.5 51 51.0
CiPaw.11G126900 Carya illinoinensis HOM05D003548 ORTHO05D004066 8.7e-06 53.5 95 44.2
TAR636G0920 Trochodendron aralioides HOM05D003548 ORTHO05D004066 8.7e-06 53.5 50 54.0


User provided reference genes

Program Settings