Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0194341 Rosa chinensis HOM05D008293 ORTHO05D010504 1.6e-129 466.1 236 100.0
MD03G1241800 Malus domestica HOM05D008293 ORTHO05D010504 1.1e-77 293.9 234 69.2
Prupe.4G167100 Prunus persica HOM05D008293 ORTHO05D010504 1.4e-77 293.5 234 70.1
RcHm_v2.0_Chr5g0030831 Rosa chinensis HOM05D008293 ORTHO05D010504 3.6e-76 288.9 238 70.2
QL08p026533 Quercus lobata HOM05D008293 ORTHO05D010504 1.3e-73 280.4 233 64.4
Haze_09337 Corylus avellana HOM05D008293 ORTHO05D010504 8.5e-70 267.7 247 61.1
GSVIVG01014211001 Vitis vinifera HOM05D008293 ORTHO05D010504 2.1e-68 263.1 236 63.1
CANSAT35G0405 Cannabis sativa HOM05D008293 ORTHO05D010504 2.7e-68 262.7 238 63.9
Hma1.2p1_2505F.1_g323420 Hydrangea macrophylla HOM05D008293 ORTHO05D010504 3.6e-68 262.3 238 61.8
RcHm_v2.0_Chr5g0031411 Rosa chinensis HOM05D008293 ORTHO05D010504 6.1e-68 261.5 222 68.9
Ciclev10020583m.g Citrus clementina HOM05D008293 ORTHO05D010504 1.4e-67 260.4 234 60.7
Actinidia18798 Actinidia chinensis HOM05D008293 ORTHO05D010504 8.8e-67 257.7 236 63.6
Thecc.07G109900 Theobroma cacao HOM05D008293 ORTHO05D010504 2.6e-66 256.1 238 60.1
Dinv14981 Davidia involucrata HOM05D008293 ORTHO05D010504 1.7e-65 253.4 239 59.4
Atru.chr2.2164 Acer truncatum HOM05D008293 ORTHO05D010504 2.8e-65 252.7 241 59.8
CSS0000482 Camellia sinensis var. sinensis HOM05D008293 ORTHO05D010504 4.8e-65 251.9 236 60.2
COL.COLO4_24863 Corchorus olitorius HOM05D008293 ORTHO05D010504 2.4e-64 249.6 234 59.0
Lj1A831T70 Lonicera japonica HOM05D008293 ORTHO05D010504 1.2e-63 247.3 235 60.0
TAR627G0720 Trochodendron aralioides HOM05D008293 ORTHO05D010504 1.7e-62 243.4 236 59.3
Rhsim04G0025400 Rhododendron simsii HOM05D008293 ORTHO05D010504 1.5e-61 240.4 239 57.3
PGR083G2613 Punica granatum HOM05D008293 ORTHO05D010504 4.2e-61 238.8 246 57.3
Gohir.A13G148900 Gossypium hirsutum HOM05D008293 ORTHO05D010504 7.2e-61 238.0 235 58.7
Gohir.D13G153400 Gossypium hirsutum HOM05D008293 ORTHO05D010504 1.6e-60 236.9 235 58.7
RcHm_v2.0_Chr5g0031211 Rosa chinensis HOM05D008293 ORTHO05D010504 4.7e-60 235.3 234 62.8
Gorai.013G173300 Gossypium raimondii HOM05D008293 ORTHO05D010504 2.3e-59 233.0 237 58.6
Nitab4.5_0000246g0170 Nicotiana tabacum HOM05D008293 ORTHO05D010504 1.5e-58 230.3 238 55.0
Nitab4.5_0001145g0060 Nicotiana tabacum HOM05D008293 ORTHO05D010504 1.5e-58 230.3 238 55.0
PSO782G2569 Papaver somniferum HOM05D008293 ORTHO05D010504 3.3e-58 229.2 234 57.3
Sopen07g030780 Solanum pennellii HOM05D008293 ORTHO05D010504 2.8e-57 226.1 238 54.2
Migut.M00735 Erythranthe guttata HOM05D008293 ORTHO05D010504 1.4e-56 223.8 233 54.9
Peaxi162Scf00069g02232 Petunia axillaris HOM05D008293 ORTHO05D010504 1.8e-56 223.4 238 55.5
PGSC0003DMG400012428 Solanum tuberosum HOM05D008293 ORTHO05D010504 5.3e-56 221.9 238 55.0
CAN.G162.9 Capsicum annuum HOM05D008293 ORTHO05D010504 9.1e-56 221.1 237 55.3
Cc05_g11210 Coffea canephora HOM05D008293 ORTHO05D010504 1.2e-55 220.7 233 53.2
Ciclev10023335m.g Citrus clementina HOM05D008293 ORTHO05D010504 2.6e-55 219.5 264 50.8
AagrBONN_evm.TU.Sc2ySwM_344.4932 Anthoceros agrestis HOM05D008293 ORTHO05D010504 9.4e-53 211.1 233 50.6
HPP92_024759 Vanilla planifolia HOM05D008293 ORTHO05D010504 9.4e-53 211.1 239 51.5
Aqoxy4G00368 Aquilegia oxysepala HOM05D008293 ORTHO05D010504 4.7e-52 208.8 241 52.3
Pp3c19_10600 Physcomitrium patens HOM05D008293 ORTHO05D010504 6.1e-52 208.4 234 51.7
Cpa.g.sc97.100 Carica papaya HOM05D008293 ORTHO05D010504 8.0e-52 208.0 174 64.9
Pp3c22_22050 Physcomitrium patens HOM05D008293 ORTHO05D010504 8.8e-51 204.5 234 50.4
SGA_v2.0_scaffold55G19705 Striga asiatica HOM05D008293 ORTHO05D010504 9.1e-48 194.5 234 52.6
SEGI_20639 Sequoiadendron giganteum HOM05D008293 ORTHO05D010504 4.5e-47 192.2 234 47.9
Solyc07g062543.1 Solanum lycopersicum HOM05D008293 ORTHO05D010504 1.7e-46 190.3 173 59.5
Mapoly0032s0102 Marchantia polymorpha HOM05D008293 ORTHO05D010504 4.2e-45 185.7 233 48.5
Nn1g09105 Nelumbo nucifera HOM05D008293 ORTHO05D010504 5.5e-45 185.3 231 51.5
SMO118G0404 Selaginella moellendorffii HOM05D008293 ORTHO05D010504 5.5e-45 185.3 233 48.1
MD10G1199100 Malus domestica HOM05D008293 ORTHO05D010504 1.8e-40 170.2 187 54.5
CBR_g40882 Chara braunii HOM05D008293 ORTHO05D010504 2.6e-34 149.8 219 44.7
PRCOL_00003950 Prasinoderma coloniale HOM05D008293 ORTHO05D010504 5.7e-34 148.7 237 40.5
Atru.chr2.2165 Acer truncatum HOM05D003516 ORTHO05D004068 7.5e-34 148.3 170 54.1
Ca_29004_v3 Cicer arietinum L. HOM05D008293 ORTHO05D010504 3.0e-14 83.2 74 55.4
AagrBONN_evm.TU.Sc2ySwM_344.893 Anthoceros agrestis HOM05D008293 ORTHO05D010504 3.9e-14 82.8 123 43.1
Actinidia35215 Actinidia chinensis HOM05D008293 ORTHO05D010504 7.8e-07 58.5 231 30.7


User provided reference genes

Program Settings