Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0192561 Rosa chinensis HOM05D008921 ORTHO05D010506 8.5e-69 263.5 126 100.0
FAN08G0942 Fragaria x ananassa HOM05D008921 ORTHO05D010506 1.7e-53 212.6 128 84.4
FAN04G2975 Fragaria x ananassa HOM05D008921 ORTHO05D010506 1.4e-50 203.0 128 81.2
FvH4_5g06300 Fragaria vesca HOM05D008921 ORTHO05D010506 2.3e-50 202.2 128 79.7
FAN18G0512 Fragaria x ananassa HOM05D008921 ORTHO05D010506 2.3e-50 202.2 128 79.7
FAN13G1719 Fragaria x ananassa HOM05D008921 ORTHO05D010506 4.3e-36 154.8 107 74.8
Prupe.6G157600 Prunus persica HOM05D008921 ORTHO05D010506 2.4e-26 122.5 123 57.7
Prupe.5G165500 Prunus persica HOM05D008921 ORTHO05D010506 8.4e-24 114.0 126 54.0
Hma1.2p1_0046F.1_g027140 Hydrangea macrophylla HOM05D008921 ORTHO05D010506 4.4e-17 91.7 116 44.0
CSS0048204 Camellia sinensis var. sinensis HOM05D008921 ORTHO05D010506 3.2e-15 85.5 127 43.3
Haze_07588 Corylus avellana HOM05D008921 ORTHO05D010506 5.1e-13 78.2 131 41.2
Cfa019218 Carpinus fangiana HOM05D008921 ORTHO05D010506 6.6e-13 77.8 129 38.8
Cfa019220 Carpinus fangiana HOM05D008921 ORTHO05D010506 4.3e-12 75.1 128 39.8
Sabra12G0061700 Salix brachista HOM05D008921 ORTHO05D010506 1.3e-11 73.6 120 40.8
Cpa.g.sc159.19 Carica papaya HOM05D008921 ORTHO05D010506 2.1e-11 72.8 126 37.3
Potri.012G085800 Populus trichocarpa HOM05D008921 ORTHO05D010506 1.8e-10 69.7 115 38.3
Manes.14G060500 Manihot esculenta HOM05D008921 ORTHO05D010506 2.0e-09 66.2 119 37.0
Atru.chr9.2579 Acer truncatum HOM05D008921 ORTHO05D010506 5.8e-09 64.7 132 37.1
Thecc.03G025900 Theobroma cacao HOM05D008921 ORTHO05D010506 4.9e-08 61.6 130 39.2
Aqoxy5G03744 Aquilegia oxysepala HOM05D008921 ORTHO05D010506 4.2e-07 58.5 120 35.8
Lj5g0011006 Lotus japonicus HOM05D010415 ORTHO05D013002 4.2e-07 58.5 114 36.0
Nitab4.5_0010452g0050 Nicotiana tabacum HOM05D012681 ORTHO05D010506 4.2e-07 58.5 110 35.5
TAR622G0966 Trochodendron aralioides HOM05D008921 ORTHO05D010506 9.3e-07 57.4 125 34.4
Gorai.003G115500 Gossypium raimondii HOM05D008921 ORTHO05D010506 1.6e-06 56.6 130 36.9
Gohir.D03G109400 Gossypium hirsutum HOM05D008921 ORTHO05D010506 7.9e-06 54.3 130 36.2


User provided reference genes

Program Settings