Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 1.0e-201 706.4 334 100.0
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 6.0e-178 627.5 326 89.6
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 6.0e-178 627.5 326 89.6
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 7.8e-178 627.1 326 89.6
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 1.7e-177 625.9 326 89.6
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 1.0e-169 600.1 319 85.6
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 1.9e-168 595.9 327 82.6
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 1.3e-159 566.6 319 80.3
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 8.1e-159 563.9 319 80.6
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 1.8e-158 562.8 318 81.4
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 3.1e-158 562.0 319 79.0
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 1.5e-157 559.7 319 79.0
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 5.8e-157 557.8 319 78.4
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 1.3e-156 556.6 319 78.7
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 1.3e-156 556.6 320 79.4
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 3.8e-156 555.1 319 77.1
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 6.4e-156 554.3 318 79.6
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 8.4e-156 553.9 320 79.1
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 1.4e-155 553.1 318 78.9
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 1.9e-155 552.7 318 78.6
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 4.2e-155 551.6 320 77.5
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 7.1e-155 550.8 318 78.0
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 1.6e-154 549.7 319 76.2
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 2.1e-154 549.3 333 75.7
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 3.5e-154 548.5 319 77.1
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 6.0e-154 547.7 333 75.1
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 2.3e-153 545.8 320 77.5
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 6.6e-153 544.3 319 78.7
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 6.6e-153 544.3 319 76.5
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 8.7e-153 543.9 333 74.5
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 1.5e-152 543.1 320 77.2
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 1.5e-152 543.1 334 75.4
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 2.5e-152 542.3 319 76.2
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 4.3e-152 541.6 319 76.2
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 5.6e-152 541.2 320 76.6
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 7.3e-152 540.8 319 77.4
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 7.3e-152 540.8 319 77.1
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 1.3e-151 540.0 319 76.5
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 4.8e-151 538.1 316 78.2
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 8.1e-151 537.3 319 76.8
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 2.4e-150 535.8 319 76.5
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.4e-150 535.8 320 75.3
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 5.3e-150 534.6 311 76.8
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 6.9e-150 534.3 314 77.1
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 1.2e-149 533.5 319 76.2
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 1.2e-149 533.5 318 75.8
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 1.5e-149 533.1 318 76.1
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 1.5e-149 533.1 318 75.2
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 1.5e-149 533.1 321 75.4
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 1.5e-149 533.1 319 75.9
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 1.5e-149 533.1 321 76.0
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 2.6e-149 532.3 327 73.4
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 4.5e-149 531.6 315 76.5
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 7.6e-149 530.8 319 76.2
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 1.7e-148 529.6 319 74.3
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 1.7e-148 529.6 318 75.8
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 2.2e-148 529.3 319 76.5
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 2.9e-148 528.9 319 74.3
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 2.9e-148 528.9 317 76.3
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 8.4e-148 527.3 318 75.8
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 1.4e-147 526.6 319 75.9
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.9e-147 526.2 318 75.8
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 3.2e-147 525.4 318 75.2
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 4.2e-147 525.0 319 74.6
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 4.2e-147 525.0 319 74.0
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 5.5e-147 524.6 319 74.3
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 5.5e-147 524.6 318 76.7
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 5.5e-147 524.6 318 75.2
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 7.1e-147 524.2 314 74.2
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 7.1e-147 524.2 316 76.6
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 2.1e-146 522.7 320 74.1
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 2.7e-146 522.3 322 73.3
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 6.0e-146 521.2 316 74.4
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 1.8e-145 519.6 317 74.8
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 2.3e-145 519.2 314 75.2
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 3.9e-145 518.5 319 74.3
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 5.1e-145 518.1 314 72.9
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 1.9e-144 516.2 321 74.8
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 2.5e-144 515.8 314 74.2
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 2.5e-144 515.8 319 74.0
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 7.4e-144 514.2 319 73.0
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 9.6e-144 513.8 318 73.6
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 1.3e-143 513.5 320 73.4
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 2.1e-143 512.7 318 73.3
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 2.8e-143 512.3 320 71.2
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 8.1e-143 510.8 318 72.0
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 4.0e-142 508.4 322 69.9
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 9.0e-142 507.3 319 73.7
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 2.0e-141 506.1 320 70.9
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 4.5e-141 505.0 318 70.1
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 4.5e-141 505.0 318 71.7
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 5.8e-141 504.6 308 73.7
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 7.6e-141 504.2 318 72.3
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 2.2e-140 502.7 318 71.1
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 4.2e-139 498.4 318 72.0
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 9.3e-139 497.3 310 72.9
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 4.6e-138 495.0 319 71.8
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 1.0e-137 493.8 317 70.7
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 1.3e-137 493.4 318 71.1
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 5.1e-137 491.5 318 70.8
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 5.1e-137 491.5 301 74.1
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 2.5e-136 489.2 318 67.3
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 3.3e-136 488.8 301 73.8
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 5.7e-136 488.0 317 69.4
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 9.6e-136 487.3 318 67.3
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 1.3e-135 486.9 315 70.2
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 1.6e-135 486.5 317 69.4
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 2.1e-135 486.1 317 69.4
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 3.7e-135 485.3 317 69.1
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 3.7e-135 485.3 318 69.2
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 3.7e-135 485.3 318 69.5
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 6.3e-135 484.6 319 69.9
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 6.9e-134 481.1 306 69.9
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 1.5e-133 479.9 306 69.6
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 1.5e-133 479.9 317 68.5
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.6e-133 479.2 295 73.2
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 7.6e-133 477.6 304 67.4
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 1.7e-132 476.5 306 69.3
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 1.1e-131 473.8 317 66.9
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 1.4e-131 473.4 306 69.3
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 7.9e-130 467.6 304 67.4
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 5.1e-129 464.9 319 69.3
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 8.7e-129 464.2 322 65.8
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 7.7e-125 451.1 315 64.8
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 1.4e-123 446.8 273 72.5
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 1.9e-123 446.4 306 66.7
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 4.2e-123 445.3 319 65.8
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 1.4e-121 440.3 323 62.5
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 1.8e-121 439.9 289 68.5
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 2.2e-119 433.0 294 67.7
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 3.7e-119 432.2 318 60.1
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 5.9e-117 424.9 313 62.9
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 8.5e-116 421.0 306 61.8
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 2.3e-113 412.9 322 57.5
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 3.0e-113 412.5 322 62.4
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 3.0e-113 412.5 322 62.4
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 5.2e-105 385.2 306 57.2
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.3e-103 380.6 303 61.4
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 2.8e-103 379.4 226 74.3
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 6.3e-103 378.3 216 77.8
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 6.1e-98 361.7 307 55.7
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 7.0e-94 348.2 312 52.6
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 1.2e-82 310.8 274 58.0
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.5e-72 277.3 308 47.4
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 3.7e-71 272.7 181 69.6
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 6.8e-65 251.9 262 50.0
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 1.7e-52 210.7 134 73.1
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 4.0e-49 199.5 126 66.7
Gohir.A12G185600 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.7e-47 194.1 117 76.1
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 1.5e-43 181.0 309 34.3
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 4.6e-37 159.5 310 32.6
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 1.4e-33 147.9 359 29.5
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 7.1e-30 135.6 245 35.5
Pp3c2_17660 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.3e-28 131.3 96 60.4
HPP92_020253 Vanilla planifolia HOM05D000434 ORTHO05D005992 2.0e-16 90.9 61 70.5
Oeu057324.1 Olea europaea HOM05D000434 ORTHO05D005992 4.6e-13 79.7 74 54.1


User provided reference genes

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