Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0191541 Rosa chinensis HOM05D004681 ORTHO05D005541 1.4e-220 769.2 381 100.0
RcHm_v2.0_Chr4g0400191 Rosa chinensis HOM05D004681 ORTHO05D005541 6.4e-152 541.2 380 75.0
FAN22G1928 Fragaria x ananassa HOM05D004681 ORTHO05D005541 3.2e-143 512.3 325 79.1
FvH4_4g07590 Fragaria vesca HOM05D004681 ORTHO05D005541 3.5e-142 508.8 325 79.4
FAN12G2798 Fragaria x ananassa HOM05D004681 ORTHO05D005541 1.0e-141 507.3 325 79.1
FAN17G0253 Fragaria x ananassa HOM05D004681 ORTHO05D005541 4.9e-136 488.4 324 76.5
Prupe.1G079200 Prunus persica HOM05D004681 ORTHO05D005541 2.0e-129 466.5 316 72.2
MD13G1245600 Malus domestica HOM05D004681 ORTHO05D005541 9.0e-122 441.0 314 68.2
Thecc.09G181200 Theobroma cacao HOM05D004681 ORTHO05D005541 1.3e-115 420.6 327 65.1
Cfa013431 Carpinus fangiana HOM05D004681 ORTHO05D005541 8.2e-115 417.9 320 64.7
QL12p032381 Quercus lobata HOM05D004681 ORTHO05D005541 5.3e-114 415.2 319 63.9
CiPaw.07G195100 Carya illinoinensis HOM05D004681 ORTHO05D005541 1.5e-113 413.7 320 62.8
Gohir.D08G028500 Gossypium hirsutum HOM05D004681 ORTHO05D005541 2.0e-113 413.3 313 63.9
Gohir.A08G017900 Gossypium hirsutum HOM05D004681 ORTHO05D005541 4.5e-113 412.1 313 63.9
Dinv25404 Davidia involucrata HOM05D004681 ORTHO05D005541 1.0e-112 411.0 324 63.3
Duzib168G0714 Durio zibethinus HOM05D004681 ORTHO05D005541 1.3e-112 410.6 315 65.1
Atru.chr7.819 Acer truncatum HOM05D004681 ORTHO05D005541 1.1e-111 407.5 316 63.3
Duzib170G0205 Durio zibethinus HOM05D004681 ORTHO05D005541 1.1e-111 407.5 314 64.6
Gorai.004G025600 Gossypium raimondii HOM05D004681 ORTHO05D005541 3.2e-111 406.0 324 62.0
CANSAT11G1051 Cannabis sativa HOM05D004681 ORTHO05D005541 2.1e-110 403.3 316 62.7
Dinv26443 Davidia involucrata HOM05D004681 ORTHO05D005541 2.1e-110 403.3 295 67.5
GSVIVG01010902001 Vitis vinifera HOM05D004681 ORTHO05D005541 6.1e-110 401.7 316 61.4
Actinidia06358 Actinidia chinensis HOM05D004681 ORTHO05D005541 2.3e-109 399.8 315 61.9
CiPaw.08G033800 Carya illinoinensis HOM05D004681 ORTHO05D005541 2.0e-108 396.7 313 62.6
Actinidia22469 Actinidia chinensis HOM05D004681 ORTHO05D005541 7.4e-108 394.8 315 61.6
TWI63G0533 Tripterygium wilfordii HOM05D004681 ORTHO05D005541 1.7e-107 393.7 317 60.9
Cpa.g.sc95.29 Carica papaya HOM05D004681 ORTHO05D005541 3.7e-107 392.5 326 62.3
ClCG06G013520 Citrullus lanatus HOM05D004681 ORTHO05D005541 6.3e-107 391.7 320 61.6
Eucgr.C00132 Eucalyptus grandis HOM05D004681 ORTHO05D005541 1.4e-106 390.6 318 62.3
Ciclev10008916m.g Citrus clementina HOM05D004681 ORTHO05D005541 2.9e-104 382.9 318 60.7
Solyc07g009320.3 Solanum lycopersicum HOM05D004681 ORTHO05D005541 5.0e-104 382.1 320 60.3
Sopen07g005070 Solanum pennellii HOM05D004681 ORTHO05D005541 8.5e-104 381.3 320 60.3
MELO3C017439.2 Cucumis melo HOM05D004681 ORTHO05D005541 4.2e-103 379.0 325 59.7
PGSC0003DMG400008514 Solanum tuberosum HOM05D004681 ORTHO05D005541 5.5e-103 378.6 320 60.0
MSTRG.10452 Avicennia marina HOM05D004681 ORTHO05D005541 6.1e-102 375.2 320 58.4
HanXRQChr09g0266261 Helianthus annuus HOM05D004681 ORTHO05D005541 1.5e-100 370.5 315 59.0
Rhsim13G0200500 Rhododendron simsii HOM05D004681 ORTHO05D005541 2.6e-100 369.8 375 52.5
CAN.G1668.9 Capsicum annuum HOM05D004681 ORTHO05D005541 4.4e-100 369.0 319 58.3
SalBow7G3904 Salvia bowleyana HOM05D004681 ORTHO05D005541 4.4e-100 369.0 319 58.6
Lsat_1_v5_gn_4_183080 Lactuca sativa HOM05D004681 ORTHO05D005541 7.4e-100 368.2 318 59.7
Oeu000976.1 Olea europaea HOM05D004681 ORTHO05D005541 5.3e-98 362.1 319 57.4
Ah.09g230170 Amaranthus hybridus HOM05D004681 ORTHO05D005541 7.0e-98 361.7 321 56.4
Sc14g0001370 Simmondsia chinensis HOM05D004681 ORTHO05D005541 2.0e-97 360.1 323 56.0
Peaxi162Scf00324g00718 Petunia axillaris HOM05D004681 ORTHO05D005541 4.5e-97 359.0 320 56.9
CsaV3_1G031790 Cucumis sativus L. HOM05D004681 ORTHO05D005541 7.7e-97 358.2 325 57.8
Cc06_g22600 Coffea canephora HOM05D004681 ORTHO05D005541 1.7e-96 357.1 319 55.5
PGR044G2653 Punica granatum HOM05D004681 ORTHO05D005541 1.7e-96 357.1 322 55.9
Manes.14G161401 Manihot esculenta HOM05D004681 ORTHO05D005541 5.0e-96 355.5 320 57.2
Nitab4.5_0010281g0010 Nicotiana tabacum HOM05D004681 ORTHO05D005541 8.5e-96 354.8 315 56.5
SGA_v2.0_scaffold41G15864 Striga asiatica HOM05D004681 ORTHO05D005541 1.5e-95 354.0 314 57.6
AUR62033246 Chenopodium quinoa HOM05D004681 ORTHO05D005541 2.5e-95 353.2 321 56.1
Manes.04G060300 Manihot esculenta HOM05D004681 ORTHO05D005541 2.5e-95 353.2 320 57.2
Hund09046 Selenicereus undatus HOM05D004681 ORTHO05D005541 3.2e-95 352.8 323 57.9
BcaB03g16704 Brassica carinata HOM05D004681 ORTHO05D005541 5.5e-95 352.1 311 57.2
RcHm_v2.0_Chr7g0191431 Rosa chinensis HOM05D004681 ORTHO05D005541 2.7e-94 349.7 297 66.7
EL10Ac8g18317 Beta vulgaris HOM05D004681 ORTHO05D005541 4.7e-94 349.0 322 54.7
Glyma.15G164000 Glycine max HOM05D004681 ORTHO05D005541 4.7e-94 349.0 316 59.5
Sp3g32480 Schrenkiella parvula HOM05D004681 ORTHO05D005541 1.0e-93 347.8 312 55.1
Potri.006G077100 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.4e-93 347.4 316 56.3
SalBow7G0268 Salvia bowleyana HOM05D004681 ORTHO05D005541 1.4e-93 347.4 337 54.9
Aqoxy7G02735 Aquilegia oxysepala HOM05D004681 ORTHO05D005541 2.3e-93 346.7 325 57.2
CSS0025965 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 3.0e-93 346.3 319 55.8
PSO423G0181 Papaver somniferum HOM05D004681 ORTHO05D005541 3.0e-93 346.3 325 55.4
BcaB07g31622 Brassica carinata HOM05D004681 ORTHO05D005541 4.0e-93 345.9 312 56.4
PSO079G0045 Papaver somniferum HOM05D004681 ORTHO05D005541 4.0e-93 345.9 321 56.7
Potri.018G145508 Populus trichocarpa HOM05D004681 ORTHO05D005541 5.2e-93 345.5 282 62.1
Sed0004411 Sechium edule HOM05D004681 ORTHO05D005541 5.2e-93 345.5 262 63.4
BcaC04g22869 Brassica carinata HOM05D004681 ORTHO05D005541 1.2e-92 344.4 313 55.0
Glyma.09G057900 Glycine max HOM05D004681 ORTHO05D005541 5.7e-92 342.0 317 57.1
CSS0001946 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 7.5e-92 341.7 232 68.5
Nitab4.5_0000074g0040 Nicotiana tabacum HOM05D004681 ORTHO05D005541 7.5e-92 341.7 283 60.8
A09p12190 Brassica napus HOM05D004681 ORTHO05D005541 2.2e-91 340.1 312 54.8
COL.COLO4_29315 Corchorus olitorius HOM05D004681 ORTHO05D005541 2.2e-91 340.1 273 63.4
Thhalv10022785m.g Eutrema salsugineum HOM05D004681 ORTHO05D005541 2.8e-91 339.7 313 55.6
Phvul.003G142900 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 6.3e-91 338.6 318 57.5
AL3G52840 Arabidopsis lyrata HOM05D004681 ORTHO05D005541 1.4e-90 337.4 313 55.9
BraA09t36865Z Brassica rapa HOM05D004681 ORTHO05D005541 2.4e-90 336.7 311 54.3
VMungo1215G0406 Vigna mungo HOM05D004681 ORTHO05D005541 3.1e-90 336.3 318 55.3
BolC9t54347H Brassica oleracea HOM05D004681 ORTHO05D005541 7.0e-90 335.1 313 54.6
HanXRQChr10g0297571 Helianthus annuus HOM05D004681 ORTHO05D005541 9.1e-90 334.7 357 51.0
C09p14440 Brassica napus HOM05D004681 ORTHO05D005541 1.6e-89 334.0 311 54.0
THA.LOC104819968 Tarenaya hassleriana HOM05D004681 ORTHO05D005541 1.6e-89 334.0 312 55.8
ECA232G3088 Erigeron canadensis HOM05D004681 ORTHO05D005541 2.0e-89 333.6 318 54.4
unitig_578.g16069 Utricularia gibba HOM05D004681 ORTHO05D005541 2.7e-89 333.2 314 54.8
Carub.0003s3332 Capsella rubella HOM05D004681 ORTHO05D005541 3.5e-89 332.8 313 55.3
SGA_v2.0_scaffold21G09637 Striga asiatica HOM05D004681 ORTHO05D005541 5.9e-89 332.0 318 56.3
BcaC06g36518 Brassica carinata HOM05D004681 ORTHO05D005541 1.0e-88 331.3 311 53.7
Aa31LG8G16140 Aethionema arabicum HOM05D004681 ORTHO05D005541 1.7e-88 330.5 311 52.7
Lalb_Chr15g0084091 Lupinus albus HOM05D004681 ORTHO05D005541 2.2e-88 330.1 317 54.3
Sabra06G0058400 Salix brachista HOM05D004681 ORTHO05D005541 2.2e-88 330.1 340 51.5
Lj7A127G13 Lonicera japonica HOM05D004681 ORTHO05D005541 5.5e-87 325.5 275 58.9
AT2G19080 Arabidopsis thaliana HOM05D004681 ORTHO05D005541 9.4e-87 324.7 310 53.5
Migut.L01897 Erythranthe guttata HOM05D004681 ORTHO05D005541 3.6e-86 322.8 313 53.7
CARHR109600 Cardamine hirsuta HOM05D004681 ORTHO05D005541 6.1e-86 322.0 311 53.4
MBI13_g31546_MAGBIO Magnolia biondii HOM05D004681 ORTHO05D005541 6.1e-86 322.0 322 53.1
arahy.Tifrunner.gnm1.ann1.K04ERL Arachis hypogaea HOM05D004681 ORTHO05D005541 5.2e-85 318.9 322 52.2
arahy.Tifrunner.gnm1.ann1.L4KBSE Arachis hypogaea HOM05D004681 ORTHO05D005541 1.5e-84 317.4 322 51.9
Glyma.13G099400 Glycine max HOM05D004681 ORTHO05D005541 2.6e-84 316.6 318 52.8
Glyma.17G060700 Glycine max HOM05D004681 ORTHO05D005541 1.3e-83 314.3 319 53.3
C07p03410 Brassica napus HOM05D004681 ORTHO05D005541 3.7e-83 312.8 311 51.8
BolC7t40740H Brassica oleracea HOM05D004681 ORTHO05D005541 3.7e-83 312.8 311 51.8
A07p01650 Brassica napus HOM05D004681 ORTHO05D005541 4.8e-83 312.4 311 51.4
BraA07t27967Z Brassica rapa HOM05D004681 ORTHO05D005541 4.8e-83 312.4 311 51.4
Medtr4g127630 Medicago truncatula HOM05D004681 ORTHO05D005541 8.3e-83 311.6 317 53.9
Lj4g0016729 Lotus japonicus HOM05D004681 ORTHO05D005541 1.4e-82 310.8 317 51.1
Lj6g0005497 Lotus japonicus HOM05D004681 ORTHO05D005541 4.1e-82 309.3 313 52.7
arahy.Tifrunner.gnm1.ann1.KM341F Arachis hypogaea HOM05D004681 ORTHO05D005541 1.0e-80 304.7 318 50.6
Phvul.009G237800 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 1.0e-80 304.7 320 50.3
Psat0s736g0040 Pisum sativum HOM05D004681 ORTHO05D005541 2.9e-80 303.1 312 51.6
VMungo1309G2393 Vigna mungo HOM05D004681 ORTHO05D005541 6.6e-80 302.0 320 49.1
Ca_21245_v3 Cicer arietinum L. HOM05D004410 ORTHO05D006134 5.5e-79 298.9 317 51.4
arahy.Tifrunner.gnm1.ann1.LX7F61 Arachis hypogaea HOM05D004681 ORTHO05D005541 8.0e-78 295.0 318 49.1
TPR.G5388 Trifolium pratense HOM05D004681 ORTHO05D005541 1.4e-77 294.3 318 49.1
Medtr2g036910 Medicago truncatula HOM05D004681 ORTHO05D005541 2.3e-77 293.5 316 50.6
Ca_02042_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 3.0e-77 293.1 319 48.9
HPP92_004723 Vanilla planifolia HOM05D004681 ORTHO05D005541 1.2e-76 291.2 320 50.6
ATR0626G278 Amborella trichopoda HOM05D004681 ORTHO05D005541 1.1e-74 284.6 327 46.8
Lalb_Chr12g0199511 Lupinus albus HOM05D004681 ORTHO05D005541 1.1e-74 284.6 312 49.4
AUR62021331 Chenopodium quinoa HOM05D004681 ORTHO05D005541 8.6e-72 275.0 322 47.8
TPR.G9028 Trifolium pratense HOM05D004681 ORTHO05D005541 3.6e-70 269.6 316 48.1
Os06g0168000 Oryza sativa ssp. japonica HOM05D004681 ORTHO05D005541 4.0e-69 266.2 320 45.0
HanXRQChr04g0105751 Helianthus annuus HOM05D004681 ORTHO05D005541 1.5e-68 264.2 181 66.3
DCAR_019823 Daucus carota HOM05D004410 ORTHO05D006134 1.0e-64 251.5 321 45.8
Psat1g145840 Pisum sativum HOM05D004681 ORTHO05D005541 2.3e-64 250.4 201 58.2
Nn2g12745 Nelumbo nucifera HOM05D004681 ORTHO05D005541 4.3e-63 246.1 318 45.0
CDE06G1906 Ceratophyllum demersum HOM05D004681 ORTHO05D005541 1.6e-62 244.2 323 44.6
vmacro23062 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 1.3e-59 234.6 276 45.7
Haze_21984 Corylus avellana HOM05D004681 ORTHO05D005541 3.7e-59 233.0 204 56.9
SHI02877 Sapria himalayana HOM05D004681 ORTHO05D005541 5.4e-58 229.2 470 35.3
TAR636G1425 Trochodendron aralioides HOM05D004681 ORTHO05D005541 1.0e-56 224.9 223 55.2
Potri.018G147625 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.1e-53 214.9 324 41.0
Zm00001eb375500 Zea mays HOM05D004681 ORTHO05D005541 2.6e-52 210.3 200 53.0
Pp3c12_12510 Physcomitrium patens HOM05D004681 ORTHO05D005541 4.4e-52 209.5 332 39.2
Pp3c4_10660 Physcomitrium patens HOM05D004681 ORTHO05D005541 2.4e-50 203.8 320 38.8
Mapoly0001s0301 Marchantia polymorpha HOM05D004681 ORTHO05D005541 6.0e-49 199.1 325 38.2
CAN.G609.4 Capsicum annuum HOM05D004681 ORTHO05D005541 2.1e-46 190.7 138 65.9
AagrBONN_evm.TU.Sc2ySwM_228.4196 Anthoceros agrestis HOM05D004681 ORTHO05D005541 3.0e-40 170.2 316 34.2
SMO358G0154 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 1.4e-37 161.4 318 35.2
SGA_v2.0_scaffold41G15854 Striga asiatica HOM05D004681 ORTHO05D005541 2.4e-37 160.6 258 42.2
Potri.001G065336 Populus trichocarpa HOM05D004681 ORTHO05D005541 9.3e-34 148.7 113 66.4
Ca_02046_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 1.0e-32 145.2 227 40.1
CAN.G497.61 Capsicum annuum HOM05D004681 ORTHO05D005541 9.0e-29 132.1 115 58.3
Potri.001G064609 Populus trichocarpa HOM05D004681 ORTHO05D005541 5.6e-23 112.8 79 67.1
CAN.G266.1 Capsicum annuum HOM05D004681 ORTHO05D005541 8.1e-22 109.0 157 40.8
CBR_g39348 Chara braunii HOM05D000019 ORTHO05D000002 3.4e-20 103.6 186 32.8
Haze_21988 Corylus avellana HOM05D004681 ORTHO05D005541 3.2e-18 97.1 116 49.1
Potri.018G145080 Populus trichocarpa HOM05D004681 ORTHO05D005541 2.1e-17 94.4 170 36.5
SMO367G0296 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 3.5e-17 93.6 237 32.1
QL05p087685 Quercus lobata HOM05D004681 ORTHO05D005541 2.8e-14 84.0 193 31.1
HanXRQChr04g0105741 Helianthus annuus HOM05D004681 ORTHO05D005541 6.2e-14 82.8 114 44.7
PRCOL_00000454 Prasinoderma coloniale HOM05D004681 ORTHO05D005541 6.9e-13 79.3 247 27.9
vmacro04071 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 2.2e-11 74.3 116 41.4
Haze_21985 Corylus avellana HOM05D004681 ORTHO05D005541 3.8e-11 73.6 113 41.6
Potri.001G065000 Populus trichocarpa HOM05D004681 ORTHO05D005541 3.2e-10 70.5 101 41.6
MELO3C029108.2 Cucumis melo HOM05D004681 ORTHO05D005541 6.1e-09 66.2 50 58.0
AUR62034598 Chenopodium quinoa HOM05D022644 ORTHO05D003557 5.1e-08 63.2 52 50.0
SMO230G0066 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 1.9e-07 61.2 224 28.6
SMO367G1182 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 5.7e-07 59.7 169 29.0
MELO3C024813.2 Cucumis melo HOM05D001097 ORTHO05D001009 8.2e-06 55.8 33 72.7


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