Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0191531 Rosa chinensis HOM05D015678 ORTHO05D013939 5.9e-52 207.2 103 100.0
RcHm_v2.0_Chr7g0191441 Rosa chinensis HOM05D000568 ORTHO05D003200 1.0e-19 100.1 91 62.6
FAN04G2566 Fragaria x ananassa HOM05D000568 ORTHO05D003200 8.7e-19 97.1 91 61.5
FAN13G1895 Fragaria x ananassa HOM05D000568 ORTHO05D003200 7.3e-18 94.0 90 58.9
FAN18G1970 Fragaria x ananassa HOM05D000568 ORTHO05D003200 8.1e-17 90.5 91 57.1
TAR622G0447 Trochodendron aralioides HOM05D000568 ORTHO05D003200 3.8e-14 81.6 78 48.7
MD06G1159200 Malus domestica HOM05D000568 ORTHO05D003200 4.8e-09 64.7 87 44.8
Actinidia00046 Actinidia chinensis HOM05D000568 ORTHO05D000628 1.4e-08 63.2 52 51.9
arahy.Tifrunner.gnm1.ann1.Z8L4ZJ Arachis hypogaea HOM05D015678 ORTHO05D013939 4.0e-08 61.6 62 46.8
Medtr2g019740 Medicago truncatula HOM05D000568 ORTHO05D000628 4.0e-08 61.6 43 60.5
A07p20590 Brassica napus HOM05D015678 ORTHO05D013939 1.5e-07 59.7 41 58.5
A07p20600 Brassica napus HOM05D015678 ORTHO05D013939 1.5e-07 59.7 41 58.5
BraA07t29749Z Brassica rapa HOM05D015678 ORTHO05D013939 1.5e-07 59.7 41 58.5
QL09p036491 Quercus lobata HOM05D015678 ORTHO05D013939 1.5e-07 59.7 54 50.0
CAN.G1090.20 Capsicum annuum HOM05D000002 ORTHO05D000001 2.0e-07 59.3 39 64.1
MD14G1165500 Malus domestica HOM05D000568 ORTHO05D003200 2.0e-07 59.3 87 41.4
Phvul.006G163300 Phaseolus vulgaris HOM05D000568 ORTHO05D000628 2.0e-07 59.3 42 59.5
unitig_899.g14754 Utricularia gibba HOM05D000568 ORTHO05D005559 2.6e-07 58.9 44 59.1
VMungo0540G0868 Vigna mungo HOM05D000568 ORTHO05D000628 2.6e-07 58.9 42 59.5
TPR.G35517 Trifolium pratense HOM05D000568 ORTHO05D000628 3.4e-07 58.5 43 55.8
Ca_00555_v3 Cicer arietinum L. HOM05D000568 ORTHO05D000628 4.5e-07 58.2 43 55.8
Actinidia40246 Actinidia chinensis HOM05D000568 ORTHO05D000628 5.8e-07 57.8 46 54.3
Glyma.13G217000 Glycine max HOM05D000568 ORTHO05D000628 5.8e-07 57.8 35 65.7
Lsat_1_v5_gn_7_95260 Lactuca sativa HOM05D000568 ORTHO05D000628 5.8e-07 57.8 34 64.7
HPP92_025324 Vanilla planifolia HOM05D015678 ORTHO05D013939 5.8e-07 57.8 41 58.5
BolC6t37143H Brassica oleracea HOM05D015678 ORTHO05D013939 9.9e-07 57.0 41 53.7
CAN.G1591.5 Capsicum annuum HOM05D000011 ORTHO05D000018 1.3e-06 56.6 35 68.6
arahy.Tifrunner.gnm1.ann1.75ENLE Arachis hypogaea HOM05D000568 ORTHO05D013939 2.2e-06 55.8 62 41.9
C06p19490 Brassica napus HOM05D015678 ORTHO05D013939 2.2e-06 55.8 41 51.2
Psat1g190000 Pisum sativum HOM05D000568 ORTHO05D000628 2.2e-06 55.8 35 65.7
Nn7g38088 Nelumbo nucifera HOM05D004211 ORTHO05D013939 6.4e-06 54.3 43 55.8
Actinidia36782 Actinidia chinensis HOM05D000568 ORTHO05D013939 8.4e-06 53.9 41 53.7


User provided reference genes

Program Settings