Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0190081 Rosa chinensis HOM05D005804 ORTHO05D006849 2.1e-112 409.1 209 100.0
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 6.8e-87 324.3 193 85.0
FvH4_5g08360 Fragaria vesca HOM05D005804 ORTHO05D006849 2.0e-86 322.8 193 85.0
FAN13G2030 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.7e-85 319.7 195 84.1
FAN04G2797 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.8e-84 316.2 193 82.9
FAN08G1998 Fragaria x ananassa HOM05D005804 ORTHO05D006849 2.0e-83 312.8 188 84.6
MD14G1156600 Malus domestica HOM05D005804 ORTHO05D006849 2.9e-69 265.8 193 72.0
Prupe.5G150700 Prunus persica HOM05D005804 ORTHO05D006849 3.2e-68 262.3 193 72.0
QL10p002869 Quercus lobata HOM05D005804 ORTHO05D006849 1.2e-56 223.8 177 63.8
CiPaw.11G006800 Carya illinoinensis HOM05D005804 ORTHO05D006849 7.1e-52 208.0 199 56.8
Haze_07141 Corylus avellana HOM05D005804 ORTHO05D006849 1.5e-49 200.3 211 51.7
Manes.14G051001 Manihot esculenta HOM05D005804 ORTHO05D006849 1.9e-49 199.9 159 67.3
Gorai.001G058800 Gossypium raimondii HOM05D005804 ORTHO05D006849 4.3e-49 198.7 193 56.0
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 7.3e-49 198.0 190 60.5
Gohir.D07G055466 Gossypium hirsutum HOM05D005804 ORTHO05D006849 1.1e-47 194.1 159 61.6
MD06G1141400 Malus domestica HOM05D005804 ORTHO05D006849 1.1e-47 194.1 145 69.0
Lalb_Chr11g0069551 Lupinus albus HOM05D005804 ORTHO05D006849 1.8e-47 193.4 190 58.9
TPR.G14211 Trifolium pratense HOM05D005804 ORTHO05D006849 1.8e-47 193.4 181 58.0
Gohir.A07G051066 Gossypium hirsutum HOM05D005804 ORTHO05D006849 2.4e-47 193.0 159 61.6
Duzib205G0351 Durio zibethinus HOM05D005804 ORTHO05D006849 3.1e-47 192.6 191 53.4
Dinv23150 Davidia involucrata HOM05D005804 ORTHO05D006849 4.0e-47 192.2 194 54.6
CSS0012660 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 3.4e-46 189.1 163 60.1
Cfa018793 Carpinus fangiana HOM05D005804 ORTHO05D006849 3.4e-46 189.1 213 51.2
Lj1g0008882 Lotus japonicus HOM05D005804 ORTHO05D006849 4.4e-46 188.7 181 58.0
Oeu058729.2 Olea europaea HOM05D005804 ORTHO05D006849 5.8e-46 188.3 166 59.6
Thecc.03G129500 Theobroma cacao HOM05D005804 ORTHO05D006849 7.6e-46 188.0 161 62.1
Psat5g051400 Pisum sativum HOM05D005804 ORTHO05D006849 1.7e-45 186.8 187 56.1
arahy.Tifrunner.gnm1.ann1.Y2QIS7 Arachis hypogaea HOM05D005804 ORTHO05D006849 2.2e-45 186.4 158 62.7
Hma1.2p1_0014F.1_g009390 Hydrangea macrophylla HOM05D005804 ORTHO05D006849 2.9e-45 186.0 187 55.6
Medtr3g099220 Medicago truncatula HOM05D005804 ORTHO05D006849 2.9e-45 186.0 178 57.3
COL.COLO4_28132 Corchorus olitorius HOM05D005804 ORTHO05D006849 1.9e-44 183.3 192 54.2
Ca_16047_v3 Cicer arietinum L. HOM05D005804 ORTHO05D006849 2.4e-44 183.0 163 58.3
Lalb_Chr08g0237201 Lupinus albus HOM05D005804 ORTHO05D006849 2.4e-44 183.0 161 63.4
TWI23G1188 Tripterygium wilfordii HOM05D005804 ORTHO05D006849 5.4e-44 181.8 176 55.1
Medtr2g045240 Medicago truncatula HOM05D005804 ORTHO05D006849 1.6e-43 180.3 177 55.9
Medtr2g045245 Medicago truncatula HOM05D005804 ORTHO05D006849 1.6e-43 180.3 177 55.9
arahy.Tifrunner.gnm1.ann1.489AYV Arachis hypogaea HOM05D005804 ORTHO05D006849 3.5e-43 179.1 143 65.7
Medtr2g045235 Medicago truncatula HOM05D005804 ORTHO05D006849 3.5e-43 179.1 158 58.2
GSVIVG01008547001 Vitis vinifera HOM05D005804 ORTHO05D006849 1.3e-42 177.2 137 64.2
arahy.Tifrunner.gnm1.ann1.PR501J Arachis hypogaea HOM05D005804 ORTHO05D006849 2.3e-42 176.4 172 55.2
Migut.O00254 Erythranthe guttata HOM05D005804 ORTHO05D006849 1.1e-41 174.1 156 57.1
Eucgr.K02724 Eucalyptus grandis HOM05D005804 ORTHO05D006849 2.5e-41 172.9 161 57.8
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 9.6e-41 171.0 157 56.1
Lj9A479T55 Lonicera japonica HOM05D005804 ORTHO05D006849 9.6e-41 171.0 148 59.5
arahy.Tifrunner.gnm1.ann1.I073XK Arachis hypogaea HOM05D005804 ORTHO05D006849 2.1e-40 169.9 144 61.1
THA.LOC104825017 Tarenaya hassleriana HOM05D005804 ORTHO05D006849 2.1e-40 169.9 171 52.0
Nitab4.5_0001180g0250 Nicotiana tabacum HOM05D005804 ORTHO05D006849 2.8e-40 169.5 153 56.2
CsaV3_1G009670 Cucumis sativus L. HOM05D005804 ORTHO05D006849 3.6e-40 169.1 176 50.0
Cc04_g08810 Coffea canephora HOM05D005804 ORTHO05D006849 4.8e-40 168.7 171 52.6
Atru.chr6.1796 Acer truncatum HOM05D005804 ORTHO05D006849 1.1e-39 167.5 170 52.9
MELO3C002363.2 Cucumis melo HOM05D005804 ORTHO05D006849 3.1e-39 166.0 179 49.2
Rhsim12G0175100 Rhododendron simsii HOM05D005804 ORTHO05D006849 5.3e-39 165.2 149 59.1
Solyc03g098330.2 Solanum lycopersicum HOM05D005804 ORTHO05D006849 5.3e-39 165.2 156 54.5
Sopen03g029080 Solanum pennellii HOM05D005804 ORTHO05D006849 6.9e-39 164.9 177 50.3
Aqoxy5G03360 Aquilegia oxysepala HOM05D005804 ORTHO05D006849 9.0e-39 164.5 189 50.8
Nitab4.5_0010950g0010 Nicotiana tabacum HOM05D005804 ORTHO05D006849 9.0e-39 164.5 155 54.2
Cpa.g.sc13.112 Carica papaya HOM05D005804 ORTHO05D006849 1.2e-38 164.1 159 54.7
PSO478G1623 Papaver somniferum HOM05D005804 ORTHO05D006849 5.8e-38 161.8 161 57.8
Peaxi162Scf00171g00421 Petunia axillaris HOM05D005804 ORTHO05D006849 5.8e-38 161.8 148 56.1
PGSC0003DMG400025629 Solanum tuberosum HOM05D005804 ORTHO05D006849 5.8e-38 161.8 157 53.5
Sed0001636 Sechium edule HOM05D005804 ORTHO05D006849 9.9e-38 161.0 178 47.8
Sc22g0003840 Simmondsia chinensis HOM05D005804 ORTHO05D006849 9.9e-38 161.0 189 49.2
TAR629G0711 Trochodendron aralioides HOM05D005804 ORTHO05D006849 1.3e-37 160.6 205 51.2
Ciclev10031832m.g Citrus clementina HOM05D005804 ORTHO05D006849 2.2e-37 159.8 174 52.3
CANSAT80G2783 Cannabis sativa HOM05D005804 ORTHO05D006849 6.4e-37 158.3 128 61.7
AT4G24900 Arabidopsis thaliana HOM05D005804 ORTHO05D006849 1.1e-36 157.5 180 48.9
Glyma.06G170000 Glycine max HOM05D005804 ORTHO05D006849 1.1e-36 157.5 159 54.1
Atru.chr12.1219 Acer truncatum HOM05D005804 ORTHO05D006849 1.4e-36 157.1 166 51.2
DCAR_007491 Daucus carota HOM05D005804 ORTHO05D006849 1.9e-36 156.8 184 49.5
ECA247G1629 Erigeron canadensis HOM05D005804 ORTHO05D006849 7.1e-36 154.8 177 49.7
ClCG03G003790 Citrullus lanatus HOM05D005804 ORTHO05D006849 1.6e-35 153.7 146 54.1
SGA_v2.0_scaffold164G38120 Striga asiatica HOM05D005804 ORTHO05D006849 1.6e-35 153.7 139 56.8
AL7G28300 Arabidopsis lyrata HOM05D005804 ORTHO05D006849 4.6e-35 152.1 181 48.6
Hund02443 Selenicereus undatus HOM05D005804 ORTHO05D006849 4.6e-35 152.1 189 48.1
SalBow8G2935 Salvia bowleyana HOM05D005804 ORTHO05D006849 1.3e-34 150.6 126 61.1
CARHR232300 Cardamine hirsuta HOM05D005804 ORTHO05D006849 1.7e-34 150.2 188 45.7
Thhalv10025155m.g Eutrema salsugineum HOM05D005804 ORTHO05D006849 1.7e-34 150.2 178 47.2
Sp7g22880 Schrenkiella parvula HOM05D005804 ORTHO05D006849 1.9e-33 146.7 149 53.7
unitig_26.g9610 Utricularia gibba HOM05D005804 ORTHO05D006849 2.5e-33 146.4 206 42.7
EL10Ac5g11407 Beta vulgaris HOM05D005804 ORTHO05D006849 4.3e-33 145.6 151 53.0
VMungo1309G0122 Vigna mungo HOM05D005804 ORTHO05D006849 4.3e-33 145.6 178 49.4
HPP92_013611 Vanilla planifolia HOM05D005804 ORTHO05D006849 6.2e-32 141.7 138 50.0
AUR62029607 Chenopodium quinoa HOM05D005804 ORTHO05D006849 8.1e-32 141.4 192 45.3
HanXRQChr13g0408711 Helianthus annuus HOM05D005804 ORTHO05D006849 8.1e-32 141.4 205 43.4
vmacro16720 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 1.4e-31 140.6 143 55.2
SHI10578 Sapria himalayana HOM05D005804 ORTHO05D006849 3.1e-31 139.4 145 53.1
Dinv11175 Davidia involucrata HOM05D005804 ORTHO05D006849 5.3e-31 138.7 120 60.0
CDE05G3468 Ceratophyllum demersum HOM05D005804 ORTHO05D006849 9.0e-31 137.9 131 53.4
Zm00001eb102430 Zea mays HOM05D005804 ORTHO05D006849 2.6e-30 136.3 132 52.3
Carub.0007s1616 Capsella rubella HOM05D005804 ORTHO05D006849 9.9e-30 134.4 188 43.6
Aa31LG7G10880 Aethionema arabicum HOM05D005804 ORTHO05D006849 1.7e-29 133.7 180 45.6
MBI11_g05331_MAGBIO Magnolia biondii HOM05D005804 ORTHO05D006849 9.3e-28 127.9 163 44.2
Ah.02g114880 Amaranthus hybridus HOM05D005804 ORTHO05D006849 1.2e-27 127.5 155 45.2
Lsat_1_v5_gn_1_33221 Lactuca sativa HOM05D005804 ORTHO05D006849 2.1e-27 126.7 148 49.3
BraA01t01555Z Brassica rapa HOM05D005804 ORTHO05D006849 4.6e-27 125.6 171 44.4
A01p16190 Brassica napus HOM05D005804 ORTHO05D006849 6.0e-27 125.2 171 43.9
BcaNung06008 Brassica carinata HOM05D005804 ORTHO05D006849 1.8e-26 123.6 163 44.8
BcaC09g52237 Brassica carinata HOM05D005804 ORTHO05D006849 2.5e-25 119.8 163 46.0
BolC1t01947H Brassica oleracea HOM05D005804 ORTHO05D006849 2.5e-25 119.8 163 46.0
Mapoly0096s0043 Marchantia polymorpha HOM05D005804 ORTHO05D006849 1.6e-24 117.1 149 47.0
ATR0178G002 Amborella trichopoda HOM05D005804 ORTHO05D006849 1.4e-23 114.0 148 42.6
C01p20180 Brassica napus HOM05D005804 ORTHO05D006849 1.4e-23 114.0 161 44.7
Potri.015G096700 Populus trichocarpa HOM05D005804 ORTHO05D006849 1.8e-23 113.6 180 40.0
SEGI_03962 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 4.0e-23 112.5 167 41.3
SEGI_29979 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 4.0e-23 112.5 167 41.3
AagrBONN_evm.TU.Sc2ySwM_362.247 Anthoceros agrestis HOM05D005804 ORTHO05D006849 3.8e-21 105.9 140 46.4
Zm00001eb317740 Zea mays HOM05D005804 ORTHO05D006849 1.1e-20 104.4 133 48.1
Pp3c6_21480 Physcomitrium patens HOM05D005804 ORTHO05D006849 1.6e-19 100.5 158 39.9
Dinv11177 Davidia involucrata HOM05D005804 ORTHO05D006849 2.1e-16 90.1 110 50.9
CSS0025658 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 1.1e-15 87.8 164 39.6
SMO133G0032 Selaginella moellendorffii HOM05D005804 ORTHO05D006849 5.8e-14 82.0 141 36.2
CiPaw.12G043400 Carya illinoinensis HOM05D005804 ORTHO05D006849 9.3e-12 74.7 117 40.2
CBR_g12751 Chara braunii HOM05D005804 ORTHO05D006849 1.2e-11 74.3 174 33.3


User provided reference genes

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