Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0188121 Rosa chinensis HOM05D000087 ORTHO05D005735 1.6e-43 179.1 98 100.0
RcHm_v2.0_Chr7g0188131 Rosa chinensis HOM05D000087 ORTHO05D005735 2.0e-28 129.0 71 95.8
MD06G1127500 Malus domestica HOM05D000087 ORTHO05D005735 7.4e-28 127.1 71 93.0
Prupe.5G137300 Prunus persica HOM05D000087 ORTHO05D005735 9.7e-28 126.7 71 93.0
FAN08G3226 Fragaria x ananassa HOM05D000087 ORTHO05D005735 2.2e-27 125.6 71 93.0
FvH4_5g10170 Fragaria vesca HOM05D000087 ORTHO05D005735 4.8e-27 124.4 71 91.5
FAN04G3195 Fragaria x ananassa HOM05D000087 ORTHO05D005735 8.2e-27 123.6 71 90.1
QL02p026653 Quercus lobata HOM05D000087 ORTHO05D005735 1.7e-24 115.9 71 84.5
CANSAT64G2851 Cannabis sativa HOM05D000087 ORTHO05D005735 2.9e-24 115.2 71 85.9
MD14G1142900 Malus domestica HOM05D000087 ORTHO05D005735 2.9e-24 115.2 70 88.6
Potri.001G454200 Populus trichocarpa HOM05D000087 ORTHO05D005735 2.9e-24 115.2 71 85.9
Sabra16G0307100 Salix brachista HOM05D000087 ORTHO05D005735 2.9e-24 115.2 71 85.9
TAR629G0355 Trochodendron aralioides HOM05D000087 ORTHO05D005735 6.5e-24 114.0 71 84.5
GSVIVG01019707001 Vitis vinifera HOM05D000087 ORTHO05D005735 1.9e-23 112.5 71 84.5
Actinidia22240 Actinidia chinensis HOM05D000087 ORTHO05D005735 3.2e-23 111.7 71 83.1
Rhsim02G0255700 Rhododendron simsii HOM05D000087 ORTHO05D005735 3.2e-23 111.7 71 83.1
CiPaw.11G106200 Carya illinoinensis HOM05D000087 ORTHO05D005735 4.2e-23 111.3 71 81.7
FAN18G0494 Fragaria x ananassa HOM05D000087 ORTHO05D005735 1.2e-22 109.8 63 90.5
FAN18G4270 Fragaria x ananassa HOM05D000087 ORTHO05D005735 1.2e-22 109.8 63 90.5
Solyc07g008450.3 Solanum lycopersicum HOM05D000087 ORTHO05D005735 1.6e-22 109.4 71 83.1
Sopen07g004380 Solanum pennellii HOM05D000087 ORTHO05D005735 1.6e-22 109.4 71 83.1
Manes.17G015000 Manihot esculenta HOM05D000087 ORTHO05D005735 2.1e-22 109.0 71 78.9
TWI81G0850 Tripterygium wilfordii HOM05D000087 ORTHO05D005735 2.1e-22 109.0 71 78.9
MBI04_g04806_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 3.6e-22 108.2 71 77.5
Peaxi162Scf00046g00228 Petunia axillaris HOM05D000087 ORTHO05D005735 3.6e-22 108.2 78 76.9
Dinv11465 Davidia involucrata HOM05D000087 ORTHO05D005735 6.1e-22 107.5 71 81.7
Hma1.2p1_0198F.1_g085370 Hydrangea macrophylla HOM05D000087 ORTHO05D005735 6.1e-22 107.5 71 78.9
Nn3g18737 Nelumbo nucifera HOM05D000087 ORTHO05D005735 8.0e-22 107.1 71 78.9
Nitab4.5_0000491g0190 Nicotiana tabacum HOM05D000087 ORTHO05D005735 1.4e-21 106.3 71 80.3
Nitab4.5_0007502g0010 Nicotiana tabacum HOM05D000087 ORTHO05D005735 1.4e-21 106.3 71 80.3
PGR031G2531 Punica granatum HOM05D000087 ORTHO05D005735 1.4e-21 106.3 71 78.9
Aqoxy5G04397 Aquilegia oxysepala HOM05D000087 ORTHO05D005735 2.3e-21 105.5 71 77.5
CAN.G1548.2 Capsicum annuum HOM05D000087 ORTHO05D005735 2.3e-21 105.5 71 80.3
vmacro08519 Vaccinium macrocarpon HOM05D000087 ORTHO05D005735 3.0e-21 105.1 71 77.5
Ciclev10018581m.g Citrus clementina HOM05D000087 ORTHO05D005735 5.2e-21 104.4 71 76.1
Gohir.A08G107500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 6.7e-21 104.0 71 76.1
Gohir.D08G120500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 6.7e-21 104.0 71 76.1
Gorai.004G127300 Gossypium raimondii HOM05D000087 ORTHO05D005735 6.7e-21 104.0 71 76.1
SGA_v2.0_scaffold123G33449 Striga asiatica HOM05D000087 ORTHO05D005735 8.8e-21 103.6 71 77.5
Cc08_g17160 Coffea canephora HOM05D000087 ORTHO05D005735 1.1e-20 103.2 71 77.5
Eucgr.D02539 Eucalyptus grandis HOM05D000087 ORTHO05D005735 1.1e-20 103.2 72 72.2
Lalb_Chr14g0362591 Lupinus albus HOM05D000087 ORTHO05D005735 1.1e-20 103.2 71 74.6
PSO063G0654 Papaver somniferum HOM05D000087 ORTHO05D005735 1.5e-20 102.8 71 74.6
Duzib068G0232 Durio zibethinus HOM05D000087 ORTHO05D005735 2.0e-20 102.4 72 75.0
CSS0029196 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 3.3e-20 101.7 71 80.3
Medtr3g080640 Medicago truncatula HOM05D000087 ORTHO05D005735 5.7e-20 100.9 71 73.2
Aa31LG6G16960 Aethionema arabicum HOM05D000087 ORTHO05D005735 7.4e-20 100.5 71 71.8
Thhalv10024269m.g Eutrema salsugineum HOM05D000087 ORTHO05D005735 7.4e-20 100.5 71 73.2
Thecc.03G213700 Theobroma cacao HOM05D000087 ORTHO05D005735 7.4e-20 100.5 71 74.6
PSO782G2195 Papaver somniferum HOM05D000087 ORTHO05D005735 9.7e-20 100.1 71 71.8
Sp7g37630 Schrenkiella parvula HOM05D000087 ORTHO05D005735 1.3e-19 99.8 71 71.8
A01p17150 Brassica napus HOM05D000087 ORTHO05D005735 2.2e-19 99.0 71 71.8
C01p21480 Brassica napus HOM05D000087 ORTHO05D005735 2.2e-19 99.0 71 71.8
BolC1t02068H Brassica oleracea HOM05D000087 ORTHO05D005735 2.2e-19 99.0 71 71.8
BraA01t01671Z Brassica rapa HOM05D000087 ORTHO05D005735 2.2e-19 99.0 71 71.8
DCAR_010123 Daucus carota HOM05D000087 ORTHO05D005735 2.8e-19 98.6 71 70.4
AT4G38120 Arabidopsis thaliana HOM05D000087 ORTHO05D005735 3.7e-19 98.2 71 71.8
Lj6g0001276 Lotus japonicus HOM05D000087 ORTHO05D005735 3.7e-19 98.2 71 71.8
Psat5g111000 Pisum sativum HOM05D000087 ORTHO05D005735 3.7e-19 98.2 71 70.4
MSTRG.22476 Avicennia marina HOM05D000087 ORTHO05D005735 4.8e-19 97.8 71 74.6
Lj2C147G10 Lonicera japonica HOM05D000087 ORTHO05D005735 4.8e-19 97.8 83 67.5
Carub.0007s0001 Capsella rubella HOM05D000087 ORTHO05D005735 6.3e-19 97.4 71 71.8
HanXRQChr01g0016041 Helianthus annuus HOM05D000087 ORTHO05D005735 6.3e-19 97.4 71 71.8
THA.LOC104806594 Tarenaya hassleriana HOM05D000087 ORTHO05D005735 6.3e-19 97.4 71 71.8
AL7G10010 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 1.4e-18 96.3 71 70.4
ECA246G1365 Erigeron canadensis HOM05D000087 ORTHO05D005735 1.4e-18 96.3 71 71.8
ATR0579G142 Amborella trichopoda HOM05D000087 ORTHO05D005735 2.4e-18 95.5 71 69.0
AUR62039113 Chenopodium quinoa HOM05D000087 ORTHO05D005735 3.1e-18 95.1 71 70.4
Ca_16291_v3 Cicer arietinum L. HOM05D000087 ORTHO05D005735 3.1e-18 95.1 71 70.4
Glyma.06G181000 Glycine max HOM05D000087 ORTHO05D005735 5.3e-18 94.4 72 69.4
Cpa.g.sc37.117 Carica papaya HOM05D000087 ORTHO05D005735 7.0e-18 94.0 64 81.2
Zm00001eb416210 Zea mays HOM05D000087 ORTHO05D005735 7.0e-18 94.0 71 69.0
arahy.Tifrunner.gnm1.ann1.0XGN9Z Arachis hypogaea HOM05D000087 ORTHO05D005735 9.1e-18 93.6 71 69.0
arahy.Tifrunner.gnm1.ann1.DH86LW Arachis hypogaea HOM05D000087 ORTHO05D005735 9.1e-18 93.6 71 69.0
Phvul.011G167550 Phaseolus vulgaris HOM05D000087 ORTHO05D005735 1.2e-17 93.2 71 64.8
Migut.H02249 Erythranthe guttata HOM05D000087 ORTHO05D005735 2.6e-17 92.0 71 69.0
EL10Ac2g03880 Beta vulgaris HOM05D000087 ORTHO05D005735 3.5e-17 91.7 71 67.6
CDE02G0276 Ceratophyllum demersum HOM05D000087 ORTHO05D005735 3.5e-17 91.7 71 67.6
HPP92_028198 Vanilla planifolia HOM05D000087 ORTHO05D005735 4.5e-17 91.3 71 70.4
SEGI_26992 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 1.0e-16 90.1 71 66.2
Hund03336 Selenicereus undatus HOM05D000087 ORTHO05D005735 2.2e-16 89.0 71 64.8
CsaV3_5G001350 Cucumis sativus L. HOM05D000087 ORTHO05D005735 3.8e-16 88.2 71 64.8
Sed0004639 Sechium edule HOM05D000087 ORTHO05D005735 3.8e-16 88.2 71 64.8
ClCG01G001230 Citrullus lanatus HOM05D000087 ORTHO05D005735 1.9e-15 85.9 71 63.4
AUR62009145 Chenopodium quinoa HOM05D000087 ORTHO05D005735 2.7e-14 82.0 64 67.2
Sc01g0010950 Simmondsia chinensis HOM05D000087 ORTHO05D005735 4.0e-13 78.2 87 51.7
SMO367G1062 Selaginella moellendorffii HOM05D000087 ORTHO05D005735 3.4e-12 75.1 71 50.7
Lsat_1_v5_gn_3_13301 Lactuca sativa HOM05D000087 ORTHO05D005735 9.8e-12 73.6 44 84.1
Oeu019648.1 Olea europaea HOM05D000087 ORTHO05D005735 2.2e-11 72.4 42 85.7
Pp3c3_37190 Physcomitrium patens HOM05D000087 ORTHO05D005735 7.0e-10 67.4 71 46.5
Mapoly0043s0141 Marchantia polymorpha HOM05D000087 ORTHO05D005735 1.6e-09 66.2 71 42.3
CBR_g3175 Chara braunii HOM05D000087 ORTHO05D005735 5.9e-09 64.3 71 46.5
MBI04_g04802_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 7.2e-07 57.4 40 75.0


User provided reference genes

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