Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0186261 Rosa chinensis HOM05D005799 ORTHO05D007150 1.9e-144 515.8 257 100.0
RcHm_v2.0_Chr7g0186751 Rosa chinensis HOM05D005799 ORTHO05D007150 1.9e-67 260.0 282 57.4
FAN18G1901 Fragaria x ananassa HOM05D005799 ORTHO05D007150 6.4e-63 245.0 283 55.5
FvH4_5g11050 Fragaria vesca HOM05D005799 ORTHO05D007150 1.1e-62 244.2 281 55.5
FAN08G2876 Fragaria x ananassa HOM05D005799 ORTHO05D007150 9.3e-62 241.1 291 53.6
FAN04G0556 Fragaria x ananassa HOM05D005799 ORTHO05D007150 2.7e-61 239.6 281 54.4
FAN13G1348 Fragaria x ananassa HOM05D005799 ORTHO05D007150 3.6e-58 229.2 313 49.2
Lalb_Chr10g0096751 Lupinus albus HOM05D005799 ORTHO05D007150 1.7e-55 220.3 276 51.4
Prupe.5G128200 Prunus persica HOM05D005799 ORTHO05D007150 6.4e-55 218.4 275 51.3
TWI60G1445 Tripterygium wilfordii HOM05D005799 ORTHO05D007150 4.6e-53 212.2 269 50.6
Lalb_Chr04g0259181 Lupinus albus HOM05D005799 ORTHO05D007150 7.9e-53 211.5 272 51.8
GSVIVG01019635001 Vitis vinifera HOM05D005799 ORTHO05D007150 7.9e-53 211.5 275 49.8
Dinv12007 Davidia involucrata HOM05D005799 ORTHO05D007150 1.8e-52 210.3 272 50.0
CANSAT21G1656 Cannabis sativa HOM05D005799 ORTHO05D007150 3.0e-52 209.5 267 49.8
MD06G1116900 Malus domestica HOM05D005799 ORTHO05D007150 3.9e-52 209.1 269 50.9
Lj3g0012917 Lotus japonicus HOM05D005799 ORTHO05D007150 5.1e-52 208.8 270 51.1
MD14G1124400 Malus domestica HOM05D005799 ORTHO05D007150 8.7e-52 208.0 275 49.5
TAR375G0991 Trochodendron aralioides HOM05D005799 ORTHO05D007150 1.5e-51 207.2 267 49.8
CSS0005333 Camellia sinensis var. sinensis HOM05D005799 ORTHO05D007150 3.3e-51 206.1 272 49.6
CSS0012502 Camellia sinensis var. sinensis HOM05D005799 ORTHO05D007150 3.3e-51 206.1 272 49.6
Glyma.16G033100 Glycine max HOM05D005799 ORTHO05D007150 4.3e-51 205.7 274 50.7
Haze_09149 Corylus avellana HOM05D005799 ORTHO05D007150 1.6e-50 203.8 265 50.2
DCAR_006533 Daucus carota HOM05D005799 ORTHO05D007150 1.6e-50 203.8 272 48.9
Ca_17312_v3 Cicer arietinum L. HOM05D005799 ORTHO05D007150 6.2e-50 201.8 271 50.6
Rhsim02G0251100 Rhododendron simsii HOM05D005799 ORTHO05D007150 8.1e-50 201.4 270 49.3
Atru.chr9.1907 Acer truncatum HOM05D005799 ORTHO05D007150 1.1e-49 201.1 269 48.3
Glyma.07G067100 Glycine max HOM05D005799 ORTHO05D007150 1.4e-49 200.7 272 49.6
Potri.001G085200 Populus trichocarpa HOM05D005799 ORTHO05D007150 1.4e-49 200.7 267 48.7
Sabra01G0061800 Salix brachista HOM05D005799 ORTHO05D007150 1.8e-49 200.3 267 48.7
Phvul.010G102500 Phaseolus vulgaris HOM05D005799 ORTHO05D007150 3.1e-49 199.5 279 48.4
Eucgr.D01689 Eucalyptus grandis HOM05D005799 ORTHO05D007150 4.0e-49 199.1 274 48.2
MBI17_g40130_MAGBIO Magnolia biondii HOM05D005799 ORTHO05D007150 4.0e-49 199.1 247 50.2
CAN.G335.7 Capsicum annuum HOM05D005799 ORTHO05D007150 5.3e-49 198.7 272 48.5
ClCG10G000860 Citrullus lanatus HOM05D005799 ORTHO05D007150 5.3e-49 198.7 277 48.0
Peaxi162Scf00161g00018 Petunia axillaris HOM05D005799 ORTHO05D007150 5.3e-49 198.7 270 48.1
PGR031G2117 Punica granatum HOM05D005799 ORTHO05D007150 5.3e-49 198.7 264 48.5
VMungo0331G1577 Vigna mungo HOM05D005799 ORTHO05D007150 5.3e-49 198.7 279 48.0
CsaV3_3G000940 Cucumis sativus L. HOM05D005799 ORTHO05D007150 6.9e-49 198.4 279 47.7
Psat7g010960 Pisum sativum HOM05D005799 ORTHO05D007150 9.0e-49 198.0 279 48.4
Ciclev10019070m.g Citrus clementina HOM05D005799 ORTHO05D007150 1.2e-48 197.6 268 47.8
vmacro11512 Vaccinium macrocarpon HOM05D005799 ORTHO05D007150 1.2e-48 197.6 267 48.3
ECA246G3622 Erigeron canadensis HOM05D005799 ORTHO05D007150 1.5e-48 197.2 272 47.8
Nitab4.5_0000837g0110 Nicotiana tabacum HOM05D005799 ORTHO05D007150 1.5e-48 197.2 272 47.8
Peaxi162Scf00039g00141 Petunia axillaris HOM05D005799 ORTHO05D007150 1.5e-48 197.2 270 47.8
QL02p029127 Quercus lobata HOM05D005799 ORTHO05D007150 2.0e-48 196.8 268 48.9
Lj8C201G21 Lonicera japonica HOM05D005799 ORTHO05D007150 2.6e-48 196.4 268 48.5
Medtr8g104280 Medicago truncatula HOM05D005799 ORTHO05D007150 2.6e-48 196.4 277 48.7
Sed0014517 Sechium edule HOM05D005799 ORTHO05D007150 2.6e-48 196.4 277 46.9
arahy.Tifrunner.gnm1.ann1.YTN4Z3 Arachis hypogaea HOM05D005799 ORTHO05D007150 3.4e-48 196.1 270 48.1
Manes.02G004000 Manihot esculenta HOM05D005799 ORTHO05D007150 3.4e-48 196.1 265 48.3
Nitab4.5_0000151g0390 Nicotiana tabacum HOM05D005799 ORTHO05D007150 4.5e-48 195.7 283 47.3
Cfa011938 Carpinus fangiana HOM05D005799 ORTHO05D007150 5.8e-48 195.3 265 49.4
TPR.G32682 Trifolium pratense HOM05D005799 ORTHO05D007150 5.8e-48 195.3 267 49.4
Cc08_g16640 Coffea canephora HOM05D005799 ORTHO05D007150 7.6e-48 194.9 285 46.7
arahy.Tifrunner.gnm1.ann1.3PG13R Arachis hypogaea HOM05D005799 ORTHO05D007150 9.9e-48 194.5 274 47.4
CAN.G1079.6 Capsicum annuum HOM05D005799 ORTHO05D007150 1.3e-47 194.1 272 47.4
Lsat_1_v5_gn_3_13660 Lactuca sativa HOM05D005799 ORTHO05D007150 1.7e-47 193.7 259 47.9
CDE04G1382 Ceratophyllum demersum HOM05D005799 ORTHO05D007150 2.2e-47 193.4 274 46.7
Hma1.2p1_0440F.1_g153730 Hydrangea macrophylla HOM05D005799 ORTHO05D007150 2.2e-47 193.4 289 45.7
PSO063G0471 Papaver somniferum HOM05D005799 ORTHO05D007150 3.8e-47 192.6 253 49.0
Solyc08g066730.3 Solanum lycopersicum HOM05D005799 ORTHO05D007150 4.9e-47 192.2 282 46.1
Sopen08g020700 Solanum pennellii HOM05D005799 ORTHO05D007150 4.9e-47 192.2 282 46.1
CiPaw.12G078600 Carya illinoinensis HOM05D005799 ORTHO05D007150 6.4e-47 191.8 239 50.2
PSO782G0762 Papaver somniferum HOM05D005799 ORTHO05D007150 6.4e-47 191.8 252 48.0
TPR.G37954 Trifolium pratense HOM05D005799 ORTHO05D007150 6.4e-47 191.8 267 48.7
ATR0810G200 Amborella trichopoda HOM05D005799 ORTHO05D007150 8.4e-47 191.4 247 49.0
Oeu010742.3 Olea europaea HOM05D005799 ORTHO05D007150 8.4e-47 191.4 284 46.1
Duzib205G1547 Durio zibethinus HOM05D005799 ORTHO05D007150 2.4e-46 189.9 264 47.0
THA.LOC104806452 Tarenaya hassleriana HOM05D005799 ORTHO05D007150 2.4e-46 189.9 265 45.7
Gohir.D12G240500 Gossypium hirsutum HOM05D005799 ORTHO05D007150 4.2e-46 189.1 274 46.7
Gorai.008G257500 Gossypium raimondii HOM05D005799 ORTHO05D007150 4.2e-46 189.1 274 46.7
HanXRQChr17g0534781 Helianthus annuus HOM05D005799 ORTHO05D007150 4.2e-46 189.1 265 45.7
Thecc.03G222800 Theobroma cacao HOM05D005799 ORTHO05D007150 4.2e-46 189.1 274 46.4
MBI12_g03921_MAGBIO Magnolia biondii HOM05D005799 ORTHO05D007150 5.5e-46 188.7 275 46.5
Gohir.A12G239300 Gossypium hirsutum HOM05D005799 ORTHO05D007150 7.1e-46 188.3 274 46.7
Aa31LG9G11310 Aethionema arabicum HOM05D005799 ORTHO05D007150 1.2e-45 187.6 266 45.5
Ah.07g197850 Amaranthus hybridus HOM05D005799 ORTHO05D007150 1.2e-45 187.6 272 45.6
MSTRG.12196 Avicennia marina HOM05D005799 ORTHO05D007150 2.1e-45 186.8 255 46.3
AUR62007039 Chenopodium quinoa HOM05D005799 ORTHO05D007150 2.7e-45 186.4 270 44.8
PGSC0003DMG400004314 Solanum tuberosum HOM05D005799 ORTHO05D007150 3.5e-45 186.0 283 45.2
AUR62019903 Chenopodium quinoa HOM05D005799 ORTHO05D007150 4.6e-45 185.7 270 44.8
COL.COLO4_10780 Corchorus olitorius HOM05D005799 ORTHO05D007150 4.6e-45 185.7 274 46.4
Medtr2g099870 Medicago truncatula HOM05D005799 ORTHO05D007150 2.3e-44 183.3 248 48.4
AT4G10760 Arabidopsis thaliana HOM05D005799 ORTHO05D007150 1.1e-43 181.0 242 46.3
Carub.0006s2954 Capsella rubella HOM05D005799 ORTHO05D007150 1.1e-43 181.0 242 46.3
CARHR255850 Cardamine hirsuta HOM05D005799 ORTHO05D007150 1.1e-43 181.0 243 46.1
SEGI_05717 Sequoiadendron giganteum HOM05D005799 ORTHO05D007150 1.1e-43 181.0 252 46.0
Os02g0672600 Oryza sativa ssp. japonica HOM05D005799 ORTHO05D007150 1.5e-43 180.6 250 46.4
EL10Ac5g12455 Beta vulgaris HOM05D005799 ORTHO05D007150 2.5e-43 179.9 272 44.1
BcaB01g01512 Brassica carinata HOM05D005799 ORTHO05D007150 2.5e-43 179.9 242 45.9
BcaC04g21070 Brassica carinata HOM05D005799 ORTHO05D007150 2.5e-43 179.9 242 45.9
A09p28470 Brassica napus HOM05D005799 ORTHO05D007150 2.5e-43 179.9 242 45.9
C09p36040 Brassica napus HOM05D005799 ORTHO05D007150 2.5e-43 179.9 242 45.9
BolC9t56443H Brassica oleracea HOM05D005799 ORTHO05D007150 2.5e-43 179.9 242 45.9
BraA09t38412Z Brassica rapa HOM05D005799 ORTHO05D007150 2.5e-43 179.9 242 45.9
AL6G44810 Arabidopsis lyrata HOM05D005799 ORTHO05D007150 3.3e-43 179.5 242 45.9
Thhalv10028481m.g Eutrema salsugineum HOM05D005799 ORTHO05D007150 3.3e-43 179.5 242 45.9
Sp6g06740 Schrenkiella parvula HOM05D005799 ORTHO05D007150 5.6e-43 178.7 242 45.5
Zm00001eb250310 Zea mays HOM05D005799 ORTHO05D007150 5.6e-43 178.7 247 46.2
HPP92_007392 Vanilla planifolia HOM05D005799 ORTHO05D007150 1.6e-42 177.2 231 48.1
SGA_v2.0_scaffold104G30268 Striga asiatica HOM05D005799 ORTHO05D007150 4.8e-42 175.6 253 44.7
MELO3C013781.2 Cucumis melo HOM05D005799 ORTHO05D007150 8.2e-42 174.9 253 47.4
SalBow6G6472 Salvia bowleyana HOM05D005799 ORTHO05D007150 8.2e-42 174.9 270 43.3
Mapoly0036s0127 Marchantia polymorpha HOM05D005799 ORTHO05D007150 2.4e-41 173.3 252 44.8
Migut.I01141 Erythranthe guttata HOM05D005799 ORTHO05D007150 6.9e-41 171.8 245 45.3
unitig_748.g7543 Utricularia gibba HOM05D005799 ORTHO05D007150 2.0e-40 170.2 256 43.8
Pp3c1_32590 Physcomitrium patens HOM05D005799 ORTHO05D007150 4.5e-40 169.1 257 44.0
CBR_g39884 Chara braunii HOM05D005799 ORTHO05D007150 1.0e-39 167.9 280 41.1
Nn3g18897 Nelumbo nucifera HOM05D005799 ORTHO05D007150 1.3e-39 167.5 247 44.9
SMO307G0078 Selaginella moellendorffii HOM05D005799 ORTHO05D007150 1.2e-37 161.0 242 43.8
Sed0010941 Sechium edule HOM05D005799 ORTHO05D007150 2.7e-37 159.8 255 44.3
Actinidia22199 Actinidia chinensis HOM05D005799 ORTHO05D007150 2.2e-31 140.2 150 54.0
AagrBONN_evm.TU.Sc2ySwM_368.1158 Anthoceros agrestis HOM05D005799 ORTHO05D007150 2.2e-31 140.2 147 55.1
CDE07G1281 Ceratophyllum demersum HOM05D005799 ORTHO05D007150 2.2e-31 140.2 152 53.9
RhsimUnG0077100 Rhododendron simsii HOM05D005799 ORTHO05D007150 8.5e-31 138.3 163 49.7
SHI06892 Sapria himalayana HOM05D005799 ORTHO05D007150 2.2e-26 123.6 425 32.7
Cpa.g.sc1337.1 Carica papaya HOM05D005799 ORTHO05D007150 3.8e-23 112.8 99 59.6
Cre06.g295600 Chlamydomonas reinhardtii HOM05D005799 ORTHO05D007150 1.1e-22 111.3 222 34.7
Haze_26998 Corylus avellana HOM05D005799 ORTHO05D007150 3.6e-21 106.3 220 34.1
Haze_26999 Corylus avellana HOM05D005799 ORTHO05D007150 3.6e-21 106.3 220 34.1
SGA_v2.0_scaffold36G14279 Striga asiatica HOM05D005799 ORTHO05D007150 8.2e-18 95.1 141 44.0
CAN.G1079.5 Capsicum annuum HOM05D005799 ORTHO05D007150 5.7e-11 72.4 67 59.7
ATR0585G024 Amborella trichopoda HOM05D005799 ORTHO05D007150 3.2e-06 56.6 48 58.3


User provided reference genes

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