Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0183221 Rosa chinensis HOM05D005465 ORTHO05D006612 3.0e-69 265.0 127 100.0
FvH4_5g13720 Fragaria vesca HOM05D005465 ORTHO05D006612 6.8e-66 253.8 127 95.3
FAN18G4042 Fragaria x ananassa HOM05D005465 ORTHO05D006612 2.0e-65 252.3 125 96.0
FAN13G0353 Fragaria x ananassa HOM05D005465 ORTHO05D006612 2.9e-64 248.4 125 94.4
MD06G1226100 Malus domestica HOM05D005465 ORTHO05D006612 4.3e-52 208.0 122 83.6
DCAR_011037 Daucus carota HOM05D005465 ORTHO05D006612 6.2e-51 204.1 125 78.4
Prupe.5G206300 Prunus persica HOM05D005465 ORTHO05D006612 8.1e-51 203.8 125 78.4
Manes.06G083500 Manihot esculenta HOM05D005465 ORTHO05D006612 1.8e-50 202.6 119 79.8
VMungo1215G2862 Vigna mungo HOM05D005465 ORTHO05D006612 3.1e-50 201.8 125 79.2
MELO3C002037.2 Cucumis melo HOM05D005465 ORTHO05D006612 4.0e-50 201.4 124 75.8
ECA232G0503 Erigeron canadensis HOM05D005465 ORTHO05D006612 6.9e-50 200.7 127 76.4
ClCG04G011730 Citrullus lanatus HOM05D005465 ORTHO05D006612 1.5e-49 199.5 124 75.8
MD14G1213000 Malus domestica HOM05D005465 ORTHO05D006612 3.4e-49 198.4 122 77.9
CsaV3_1G006060 Cucumis sativus L. HOM05D005465 ORTHO05D006612 7.6e-49 197.2 124 74.2
Lsat_1_v5_gn_4_171900 Lactuca sativa HOM05D005465 ORTHO05D006612 9.9e-49 196.8 127 72.4
Haze_07739 Corylus avellana HOM05D005465 ORTHO05D006612 1.3e-48 196.4 124 77.4
Hma1.2p1_0481F.1_g162260 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 1.3e-48 196.4 124 76.6
Hma1.2p1_0481F.1_g162270 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 1.3e-48 196.4 124 76.6
CiPaw.11G054700 Carya illinoinensis HOM05D005465 ORTHO05D006612 2.2e-48 195.7 124 76.6
Glyma.17G079700 Glycine max HOM05D005465 ORTHO05D006612 2.9e-48 195.3 125 76.0
Nn3g17466 Nelumbo nucifera HOM05D005465 ORTHO05D006612 3.8e-48 194.9 123 73.2
TAR622G0582 Trochodendron aralioides HOM05D005465 ORTHO05D006612 6.4e-48 194.1 123 72.4
Cpa.g.sc746.2 Carica papaya HOM05D005465 ORTHO05D006612 1.4e-47 193.0 126 72.2
Cfa019348 Carpinus fangiana HOM05D005465 ORTHO05D006612 1.4e-47 193.0 124 75.8
Aqoxy3G03677 Aquilegia oxysepala HOM05D005465 ORTHO05D006612 2.4e-47 192.2 120 71.7
PSO063G4354 Papaver somniferum HOM05D005465 ORTHO05D006612 2.4e-47 192.2 120 74.2
PSO782G3842 Papaver somniferum HOM05D005465 ORTHO05D006612 2.4e-47 192.2 120 72.5
Nn4g23446 Nelumbo nucifera HOM05D005465 ORTHO05D006612 3.2e-47 191.8 118 74.6
Phvul.003G183800 Phaseolus vulgaris HOM05D005465 ORTHO05D006612 4.2e-47 191.4 125 74.4
Duzib205G0879 Durio zibethinus HOM05D005465 ORTHO05D006612 5.4e-47 191.0 123 73.2
Glyma.05G020100 Glycine max HOM05D005465 ORTHO05D006612 9.3e-47 190.3 125 74.4
Sed0023287 Sechium edule HOM05D005465 ORTHO05D006612 9.3e-47 190.3 124 70.2
Thecc.03G103400 Theobroma cacao HOM05D005465 ORTHO05D006612 3.5e-46 188.3 122 73.8
CSS0002198 Camellia sinensis var. sinensis HOM05D005465 ORTHO05D006612 6.0e-46 187.6 124 70.2
Nitab4.5_0000212g0270 Nicotiana tabacum HOM05D005465 ORTHO05D006612 7.8e-46 187.2 124 72.6
TWI81G0357 Tripterygium wilfordii HOM05D005465 ORTHO05D006612 7.8e-46 187.2 124 71.0
arahy.Tifrunner.gnm1.ann1.13IMLW Arachis hypogaea HOM05D005465 ORTHO05D006612 1.0e-45 186.8 126 71.4
Gohir.D03G097000 Gossypium hirsutum HOM05D005465 ORTHO05D006612 1.0e-45 186.8 123 72.4
Gorai.003G101800 Gossypium raimondii HOM05D005465 ORTHO05D006612 1.0e-45 186.8 123 72.4
TAR371G0638 Trochodendron aralioides HOM05D005465 ORTHO05D006612 1.0e-45 186.8 123 71.5
Duzib084G0509 Durio zibethinus HOM05D005465 ORTHO05D006612 1.3e-45 186.4 123 71.5
Gohir.A03G070600 Gossypium hirsutum HOM05D005465 ORTHO05D006612 2.3e-45 185.7 123 71.5
Nitab4.5_0008370g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 8.7e-45 183.7 122 73.8
Gorai.006G268200 Gossypium raimondii HOM05D005465 ORTHO05D006612 1.1e-44 183.3 123 69.9
Sc14g0006350 Simmondsia chinensis HOM05D005465 ORTHO05D006612 1.5e-44 183.0 120 75.0
COL.COLO4_24335 Corchorus olitorius HOM05D005465 ORTHO05D006612 1.9e-44 182.6 123 70.7
SGA_v2.0_scaffold4G02379 Striga asiatica HOM05D005465 ORTHO05D006612 7.3e-44 180.6 124 73.4
Migut.H00618 Erythranthe guttata HOM05D005465 ORTHO05D006612 9.6e-44 180.3 124 69.4
Lj4g0014841 Lotus japonicus HOM05D005465 ORTHO05D006612 9.6e-44 180.3 126 74.6
Atru.chr9.555 Acer truncatum HOM05D005465 ORTHO05D006612 1.6e-43 179.5 128 71.1
Rhsim08G0075200 Rhododendron simsii HOM05D005465 ORTHO05D006612 1.6e-43 179.5 123 72.4
Solyc10g082064.1 Solanum lycopersicum HOM05D005465 ORTHO05D006612 1.6e-43 179.5 124 69.4
Actinidia26253 Actinidia chinensis HOM05D005465 ORTHO05D006612 2.1e-43 179.1 124 69.4
Lalb_Chr13g0302801 Lupinus albus HOM05D005465 ORTHO05D006612 4.8e-43 177.9 121 71.9
Eucgr.K02534 Eucalyptus grandis HOM05D005465 ORTHO05D006612 1.1e-42 176.8 120 66.7
SGA_v2.0_scaffold52G19131 Striga asiatica HOM05D005465 ORTHO05D006612 1.1e-42 176.8 124 71.0
TPR.G2036 Trifolium pratense HOM05D005465 ORTHO05D006612 1.4e-42 176.4 124 66.1
Ciclev10022497m.g Citrus clementina HOM05D005465 ORTHO05D006612 3.1e-42 175.3 125 67.2
PGSC0003DMG400026569 Solanum tuberosum HOM05D005465 ORTHO05D006612 3.1e-42 175.3 124 67.7
AUR62038681 Chenopodium quinoa HOM05D005465 ORTHO05D006612 4.0e-42 174.9 120 66.7
THA.LOC104801135 Tarenaya hassleriana HOM05D005465 ORTHO05D006612 4.0e-42 174.9 124 71.0
PGR044G0931 Punica granatum HOM05D005465 ORTHO05D006612 6.9e-42 174.1 125 71.2
AUR62018194 Chenopodium quinoa HOM05D005465 ORTHO05D006612 1.5e-41 172.9 120 67.5
Cc07_g04290 Coffea canephora HOM05D005465 ORTHO05D006612 2.6e-41 172.2 120 69.2
MBI16_g10835_MAGBIO Magnolia biondii HOM05D005465 ORTHO05D006612 2.6e-41 172.2 122 68.0
SHI17457 Sapria himalayana HOM05D005465 ORTHO05D006612 2.6e-41 172.2 118 68.6
Ca_21764_v3 Cicer arietinum L. HOM05D005465 ORTHO05D006612 3.4e-41 171.8 124 66.9
Medtr4g109650 Medicago truncatula HOM05D005465 ORTHO05D006612 4.5e-41 171.4 124 65.3
BcaB08g37294 Brassica carinata HOM05D005465 ORTHO05D006612 5.8e-41 171.0 124 68.5
C09p68870 Brassica napus HOM05D005465 ORTHO05D006612 5.8e-41 171.0 124 68.5
Peaxi162Scf00991g00013 Petunia axillaris HOM05D005465 ORTHO05D006612 5.8e-41 171.0 124 65.3
Psat4g047600 Pisum sativum HOM05D005465 ORTHO05D006612 5.8e-41 171.0 124 66.9
BcaB01g05639 Brassica carinata HOM05D005465 ORTHO05D006612 7.6e-41 170.6 125 68.0
A10p28580 Brassica napus HOM05D005465 ORTHO05D006612 7.6e-41 170.6 124 67.7
BolC9t59633H Brassica oleracea HOM05D005465 ORTHO05D006612 7.6e-41 170.6 124 67.7
Ah.10g032300 Amaranthus hybridus HOM05D005465 ORTHO05D006612 9.9e-41 170.2 124 66.9
Nitab4.5_0010535g0020 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.7e-40 169.5 124 64.5
BraA10t44907Z Brassica rapa HOM05D005465 ORTHO05D006612 2.2e-40 169.1 124 66.9
Sp6g34890 Schrenkiella parvula HOM05D005465 ORTHO05D006612 2.2e-40 169.1 125 67.2
unitig_899.g15102 Utricularia gibba HOM05D005465 ORTHO05D006612 2.2e-40 169.1 120 70.8
Carub.0006s0695 Capsella rubella HOM05D005465 ORTHO05D006612 1.4e-39 166.4 127 66.1
Thhalv10015010m.g Eutrema salsugineum HOM05D005465 ORTHO05D006612 1.9e-39 166.0 125 67.2
Aa31LG3G18480 Aethionema arabicum HOM05D005465 ORTHO05D006612 3.2e-39 165.2 124 65.3
QL10p019840 Quercus lobata HOM05D005465 ORTHO05D006612 3.2e-39 165.2 122 65.6
EL10Ac2g03144 Beta vulgaris HOM05D005465 ORTHO05D006612 4.2e-39 164.9 125 64.0
A03p03570 Brassica napus HOM05D005465 ORTHO05D006612 5.4e-39 164.5 124 66.1
BraA03t09707Z Brassica rapa HOM05D005465 ORTHO05D006612 5.4e-39 164.5 124 66.1
PGSC0003DMG400001360 Solanum tuberosum HOM05D005465 ORTHO05D006612 7.1e-39 164.1 124 64.5
CARHR205120 Cardamine hirsuta HOM05D005465 ORTHO05D006612 9.3e-39 163.7 125 65.6
Dinv34936 Davidia involucrata HOM05D005465 ORTHO05D006612 9.3e-39 163.7 125 64.8
Sopen02g033620 Solanum pennellii HOM05D005465 ORTHO05D006612 9.3e-39 163.7 124 63.7
AL6G18430 Arabidopsis lyrata HOM05D005465 ORTHO05D006612 1.2e-38 163.3 125 64.0
Peaxi162Scf00166g00046 Petunia axillaris HOM05D005465 ORTHO05D006612 1.6e-38 162.9 120 65.0
DCAR_025436 Daucus carota HOM05D005465 ORTHO05D006612 2.1e-38 162.5 126 62.7
Nitab4.5_0005910g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 2.1e-38 162.5 125 64.0
Solyc02g088930.4 Solanum lycopersicum HOM05D005465 ORTHO05D006612 2.7e-38 162.2 124 62.9
AT5G08060 Arabidopsis thaliana HOM05D005465 ORTHO05D006612 3.5e-38 161.8 125 64.0
BraA02t04941Z Brassica rapa HOM05D005465 ORTHO05D006612 4.6e-38 161.4 128 64.1
Oeu062167.1 Olea europaea HOM05D005465 ORTHO05D006612 4.6e-38 161.4 124 66.9
BolC3t12939H Brassica oleracea HOM05D005465 ORTHO05D006612 1.8e-37 159.5 125 65.6
Potri.004G123700 Populus trichocarpa HOM05D005465 ORTHO05D006612 8.7e-37 157.1 125 63.2
PGSC0003DMG400035500 Solanum tuberosum HOM05D005465 ORTHO05D006612 8.7e-37 157.1 118 65.3
Zm00001eb370380 Zea mays HOM05D005465 ORTHO05D006612 3.3e-36 155.2 127 60.6
Zm00001eb152340 Zea mays HOM05D005465 ORTHO05D006612 9.6e-36 153.7 122 62.3
Os01g0763300 Oryza sativa ssp. japonica HOM05D005465 ORTHO05D006612 2.8e-35 152.1 126 58.7
Sabra04G0090300 Salix brachista HOM05D005465 ORTHO05D006612 1.1e-34 150.2 125 61.6
Gohir.D09G244200 Gossypium hirsutum HOM05D005465 ORTHO05D006612 3.1e-34 148.7 123 62.6
Rhsim10G0048500 Rhododendron simsii HOM05D005465 ORTHO05D006612 3.1e-34 148.7 124 56.5
Rhsim10G0047800 Rhododendron simsii HOM05D005465 ORTHO05D006612 6.9e-34 147.5 124 55.6
BcaB05g21584 Brassica carinata HOM05D005465 ORTHO05D006612 3.8e-32 141.7 126 57.1
Rhsim10G0050100 Rhododendron simsii HOM05D005465 ORTHO05D006612 5.5e-31 137.9 124 55.6
Hma1.2p1_0029F.1_g018040 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 1.6e-30 136.3 80 78.8
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 1.9e-28 129.4 97 63.9
Rhsim10G0048300 Rhododendron simsii HOM05D005465 ORTHO05D006612 1.9e-28 129.4 124 52.4
FAN08G0639 Fragaria x ananassa HOM05D005465 ORTHO05D006612 3.7e-27 125.2 66 86.4
Gohir.A09G243500 Gossypium hirsutum HOM05D005465 ORTHO05D006612 4.8e-27 124.8 77 72.7
BcaB08g37291 Brassica carinata HOM05D005465 ORTHO05D006612 6.9e-26 120.9 86 67.4
EL10Ac5g11896 Beta vulgaris HOM05D005465 ORTHO05D006612 7.6e-25 117.5 96 60.4
Sopen02g016050 Solanum pennellii HOM05D005465 ORTHO05D006612 3.8e-24 115.2 124 49.2
Sopen10g022010 Solanum pennellii HOM05D005465 ORTHO05D006612 3.2e-23 112.1 124 50.8
Sopen10g012570 Solanum pennellii HOM05D005465 ORTHO05D006612 4.3e-20 101.7 112 48.2
Actinidia17587 Actinidia chinensis HOM05D005465 ORTHO05D006612 2.2e-19 99.4 67 70.1
SEGI_31914 Sequoiadendron giganteum HOM05D005465 ORTHO05D006612 5.3e-18 94.7 117 47.0
Sopen10g006060 Solanum pennellii HOM05D005465 ORTHO05D006612 6.9e-18 94.4 112 46.4
TAR622G1303 Trochodendron aralioides HOM05D005465 ORTHO05D006612 2.0e-17 92.8 97 49.5
EL10Ac5g12104 Beta vulgaris HOM05D005465 ORTHO05D006612 6.5e-16 87.8 68 61.8
BcaB01g05638 Brassica carinata HOM05D005465 ORTHO05D006612 8.5e-16 87.4 70 64.3
SEGI_27681 Sequoiadendron giganteum HOM05D005465 ORTHO05D006612 7.2e-15 84.3 128 39.1
Mapoly0019s0055 Marchantia polymorpha HOM05D005465 ORTHO05D006612 7.4e-12 74.3 65 50.8
SMO263G0026 Selaginella moellendorffii HOM05D005465 ORTHO05D006612 1.7e-11 73.2 70 47.1
AagrBONN_evm.TU.Sc2ySwM_362.2833 Anthoceros agrestis HOM05D005465 ORTHO05D006612 4.8e-11 71.6 75 46.7
Pp3c16_5680 Physcomitrium patens HOM05D005465 ORTHO05D006612 3.1e-10 68.9 81 48.1
Lsat_1_v5_gn_4_50580 Lactuca sativa HOM05D005465 ORTHO05D006612 6.9e-10 67.8 61 59.0
Peaxi162Scf00991g00114 Petunia axillaris HOM05D005465 ORTHO05D006612 1.5e-09 66.6 76 48.7
Cre12.g484700 Chlamydomonas reinhardtii HOM05D005465 ORTHO05D006612 1.3e-08 63.5 84 42.9
CBR_g37656 Chara braunii HOM05D005465 ORTHO05D006612 6.5e-08 61.2 97 36.1
MCO16G501 Micromonas commoda HOM05D005465 ORTHO05D006612 1.1e-07 60.5 109 33.0


User provided reference genes

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