Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 9.5e-53 209.9 107 100.0
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 2.7e-47 191.8 107 90.7
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 6.0e-47 190.7 107 89.7
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 3.0e-46 188.3 107 88.8
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 2.6e-42 175.3 99 88.9
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 3.8e-41 171.4 102 81.4
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 4.1e-40 167.9 98 82.7
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 4.1e-40 167.9 98 82.7
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 4.1e-40 167.9 98 82.7
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 7.1e-40 167.2 98 80.6
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 9.2e-40 166.8 97 83.5
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 1.6e-39 166.0 97 84.5
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 3.5e-39 164.9 99 78.8
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 4.6e-39 164.5 98 80.6
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 4.6e-39 164.5 98 80.6
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 6.0e-39 164.1 98 83.7
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 6.0e-39 164.1 98 81.6
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 7.8e-39 163.7 98 77.6
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 7.8e-39 163.7 97 83.5
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 1.0e-38 163.3 102 79.4
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 1.7e-38 162.5 98 80.6
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 2.3e-38 162.2 98 78.6
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 2.3e-38 162.2 98 79.6
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 6.6e-38 160.6 97 77.3
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 8.6e-38 160.2 98 79.6
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 8.6e-38 160.2 97 76.3
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 8.6e-38 160.2 102 72.5
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 8.6e-38 160.2 102 72.5
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 8.6e-38 160.2 102 72.5
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 8.6e-38 160.2 99 74.7
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 1.1e-37 159.8 97 76.3
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 1.1e-37 159.8 100 74.0
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 1.1e-37 159.8 97 77.3
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 1.1e-37 159.8 99 76.8
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 1.5e-37 159.5 97 80.4
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 1.5e-37 159.5 97 75.3
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 1.5e-37 159.5 98 76.5
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 1.9e-37 159.1 97 76.3
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 1.9e-37 159.1 96 77.1
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 1.9e-37 159.1 97 76.3
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 2.5e-37 158.7 100 76.0
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 3.3e-37 158.3 97 75.3
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 3.3e-37 158.3 97 78.4
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 4.3e-37 157.9 98 75.5
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 4.3e-37 157.9 98 75.5
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 4.3e-37 157.9 98 77.6
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 7.3e-37 157.1 97 75.3
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 1.6e-36 156.0 98 71.4
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 2.1e-36 155.6 97 75.3
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 2.8e-36 155.2 97 71.1
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 3.6e-36 154.8 97 78.4
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 4.7e-36 154.5 97 70.1
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 8.1e-36 153.7 97 70.1
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 8.1e-36 153.7 97 70.1
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 8.1e-36 153.7 96 71.9
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 1.1e-35 153.3 100 74.0
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 1.4e-35 152.9 99 72.7
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 3.1e-35 151.8 96 75.0
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 4.0e-35 151.4 96 70.8
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 4.0e-35 151.4 97 68.0
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 5.2e-35 151.0 97 68.0
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 5.2e-35 151.0 101 70.3
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 9.0e-35 150.2 96 69.8
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 1.2e-34 149.8 96 71.9
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 2.0e-34 149.1 93 72.0
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 9.9e-34 146.7 96 69.8
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 9.9e-34 146.7 99 73.7
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 1.3e-33 146.4 98 68.4
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 2.2e-33 145.6 96 68.8
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 6.4e-33 144.1 92 73.9
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 1.1e-32 143.3 92 73.9
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 1.1e-32 143.3 92 73.9
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 1.1e-32 143.3 91 71.4
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 1.9e-32 142.5 101 65.3
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 3.2e-32 141.7 86 75.6
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 5.4e-32 141.0 98 67.3
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 7.1e-32 140.6 95 68.4
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 7.1e-32 140.6 98 67.3
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 7.1e-32 140.6 98 67.3
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 9.3e-32 140.2 101 67.3
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 1.2e-31 139.8 130 57.7
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 2.7e-31 138.7 98 67.3
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 6.0e-31 137.5 101 66.3
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 1.0e-30 136.7 95 74.7
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 6.6e-30 134.0 99 61.6
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 8.7e-30 133.7 142 52.8
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 8.7e-30 133.7 99 64.6
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 8.7e-30 133.7 95 64.2
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 1.1e-29 133.3 96 68.8
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 4.8e-28 127.9 94 68.1
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 6.2e-28 127.5 81 74.1
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 6.2e-28 127.5 82 75.6
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 1.5e-26 122.9 82 68.3
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 2.0e-26 122.5 98 61.2
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 2.0e-26 122.5 81 71.6
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 2.6e-26 122.1 92 66.3
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 3.4e-26 121.7 89 64.0
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 5.8e-26 120.9 79 73.4
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 5.8e-26 120.9 94 58.5
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 1.7e-25 119.4 80 66.2
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 3.2e-24 115.2 90 62.2
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 1.8e-22 109.4 92 57.6
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 3.3e-21 105.1 82 68.3
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 4.3e-21 104.8 81 59.3
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 5.6e-21 104.4 89 57.3
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 7.4e-21 104.0 78 71.8
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 1.3e-20 103.2 82 64.6
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 1.1e-19 100.1 55 81.8
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 7.6e-18 94.0 52 80.8
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 1.3e-17 93.2 52 82.7
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 2.9e-17 92.0 70 60.0
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 1.9e-16 89.4 73 57.5
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 9.6e-13 77.0 52 73.1
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 6.9e-11 70.9 47 68.1
MCO16G157 Micromonas commoda HOM05D006748 ORTHO05D008553 3.2e-08 62.0 83 36.1
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 7.9e-07 57.4 46 54.3
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 1.0e-06 57.0 45 48.9


User provided reference genes

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