Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0180511 Rosa chinensis HOM05D009463 ORTHO05D012229 7.1e-193 677.2 360 100.0
RcHm_v2.0_Chr1g0366971 Rosa chinensis HOM05D009463 ORTHO05D012229 2.2e-178 629.0 360 94.2
RcHm_v2.0_Chr2g0154821 Rosa chinensis HOM05D009463 ORTHO05D012229 5.1e-159 564.7 360 85.8
RcHm_v2.0_Chr6g0281431 Rosa chinensis HOM05D009463 ORTHO05D012229 9.7e-142 507.3 376 75.8
RcHm_v2.0_Chr3g0457891 Rosa chinensis HOM05D009463 ORTHO05D012229 7.2e-137 491.1 293 86.0
RcHm_v2.0_Chr3g0471041 Rosa chinensis HOM05D009463 ORTHO05D012229 2.2e-130 469.5 395 69.9
RcHm_v2.0_Chr3g0452071 Rosa chinensis HOM05D009463 ORTHO05D012229 9.1e-124 447.6 293 78.8
FAN03G1452 Fragaria x ananassa HOM05D009463 ORTHO05D012229 5.9e-107 391.7 424 53.8
FAN09G2392 Fragaria x ananassa HOM05D009463 ORTHO05D012229 8.9e-103 377.9 424 56.1
RcHm_v2.0_Chr2g0159611 Rosa chinensis HOM05D009463 ORTHO05D012229 1.7e-98 363.6 270 72.6
RcHm_v2.0_Chr5g0041301 Rosa chinensis HOM05D009463 ORTHO05D012229 1.5e-97 360.5 286 69.2
FAN11G1018 Fragaria x ananassa HOM05D009463 ORTHO05D012229 6.8e-95 351.7 286 66.4
RcHm_v2.0_Chr1g0372841 Rosa chinensis HOM05D009463 ORTHO05D012229 4.4e-94 349.0 270 70.7
FAN09G4195 Fragaria x ananassa HOM05D009463 ORTHO05D012229 4.6e-83 312.4 352 52.0
FAN09G2122 Fragaria x ananassa HOM05D009463 ORTHO05D012229 1.7e-77 293.9 329 53.5
FvH4_6g25780 Fragaria vesca HOM05D009463 ORTHO05D012229 1.6e-75 287.3 312 54.8
FvH4_6g25920 Fragaria vesca HOM05D009463 ORTHO05D012229 9.9e-70 268.1 283 54.4
FAN03G0630 Fragaria x ananassa HOM05D009463 ORTHO05D012229 1.7e-69 267.3 254 64.2
RcHm_v2.0_Chr2g0146841 Rosa chinensis HOM05D009463 ORTHO05D012229 1.3e-56 224.6 267 53.9
RcHm_v2.0_Chr3g0453731 Rosa chinensis HOM05D009463 ORTHO05D012229 1.6e-56 224.2 142 76.8
FAN08G3224 Fragaria x ananassa HOM05D009463 ORTHO05D012229 5.9e-46 189.1 269 46.1
RcHm_v2.0_Chr4g0427761 Rosa chinensis HOM05D009463 ORTHO05D012229 2.2e-37 160.6 97 81.4
FAN18G0706 Fragaria x ananassa HOM05D009463 ORTHO05D208178 3.3e-25 120.2 88 65.9
FvH4_5g16130 Fragaria vesca HOM05D000253 ORTHO05D000149 6.3e-24 115.9 187 41.7
FAN17G1717 Fragaria x ananassa HOM05D009463 ORTHO05D208839 1.1e-20 105.1 138 46.4
FAN18G1031 Fragaria x ananassa HOM05D009463 ORTHO05D012229 2.5e-20 104.0 116 58.6
FAN10G3848 Fragaria x ananassa HOM05D009463 ORTHO05D012229 7.0e-15 85.9 99 57.6
RcHm_v2.0_Chr5g0076511 Rosa chinensis HOM05D009463 ORTHO05D348212 2.7e-14 84.0 81 84.0


User provided reference genes

Program Settings