Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0179751 Rosa chinensis HOM05D003533 ORTHO05D004009 4.9e-31 137.5 87 100.0
FAN18G0586 Fragaria x ananassa HOM05D003533 ORTHO05D004009 3.2e-22 108.2 91 69.2
FAN13G2147 Fragaria x ananassa HOM05D003533 ORTHO05D004009 2.5e-19 98.6 90 65.6
FvH4_5g16360 Fragaria vesca HOM05D000073 ORTHO05D035262 3.3e-19 98.2 63 85.7
MD06G1181300 Malus domestica HOM05D003533 ORTHO05D004009 8.1e-18 93.6 85 62.4
Prupe.5G179600 Prunus persica HOM05D003533 ORTHO05D004009 6.4e-15 84.0 57 80.7
MD14G1187200 Malus domestica HOM05D003533 ORTHO05D004009 7.8e-13 77.0 75 61.3
QL10p012332 Quercus lobata HOM05D003533 ORTHO05D004009 4.3e-11 71.2 81 51.9
Duzib084G0973 Durio zibethinus HOM05D003533 ORTHO05D004009 6.9e-09 63.9 84 50.0
CANSAT54G2961 Cannabis sativa HOM05D003533 ORTHO05D004009 1.2e-08 63.2 76 50.0
Thecc.03G004000 Theobroma cacao HOM05D003533 ORTHO05D004009 3.4e-08 61.6 83 48.2
Thecc.03G004200 Theobroma cacao HOM05D003533 ORTHO05D004009 4.4e-08 61.2 83 48.2
TAR629G1875 Trochodendron aralioides HOM05D003533 ORTHO05D004009 5.8e-08 60.8 80 48.8
CiPaw.06G076100 Carya illinoinensis HOM05D003533 ORTHO05D004009 7.6e-08 60.5 85 47.1
Cfa019066 Carpinus fangiana HOM05D003533 ORTHO05D004009 9.9e-08 60.1 81 66.7
TAR622G1413 Trochodendron aralioides HOM05D003533 ORTHO05D004009 9.9e-08 60.1 80 46.2
AL5G27512 Arabidopsis lyrata HOM05D003533 ORTHO05D004009 1.3e-07 59.7 77 48.1
Prupe.1G261100 Prunus persica HOM05D003533 ORTHO05D004009 1.3e-07 59.7 81 54.3
CiPaw.06G076300 Carya illinoinensis HOM05D003533 ORTHO05D004009 2.9e-07 58.5 85 45.9
CiPaw.12G022900 Carya illinoinensis HOM05D003533 ORTHO05D004009 2.9e-07 58.5 76 48.7
COL.COLO4_21432 Corchorus olitorius HOM05D003533 ORTHO05D004009 2.9e-07 58.5 87 43.7
FvH4_4g35190 Fragaria vesca HOM05D003533 ORTHO05D004009 4.9e-07 57.8 81 45.7
Manes.06G100300 Manihot esculenta HOM05D003533 ORTHO05D004009 4.9e-07 57.8 83 49.4
CiPaw.06G076000 Carya illinoinensis HOM05D003533 ORTHO05D004009 8.4e-07 57.0 85 45.9
CiPaw.06G076200 Carya illinoinensis HOM05D003533 ORTHO05D004009 8.4e-07 57.0 85 45.9
FAN12G1992 Fragaria x ananassa HOM05D003533 ORTHO05D004009 1.4e-06 56.2 81 44.4
CsaV3_1G001820 Cucumis sativus L. HOM05D003533 ORTHO05D004009 1.9e-06 55.8 73 53.4
Manes.14G070400 Manihot esculenta HOM05D003533 ORTHO05D004009 1.9e-06 55.8 84 46.4
FAN22G0766 Fragaria x ananassa HOM05D003533 ORTHO05D004009 2.4e-06 55.5 81 44.4
Oeu005054.1 Olea europaea HOM05D003533 ORTHO05D004009 2.4e-06 55.5 73 50.7
TWI15G0955 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 3.2e-06 55.1 73 46.6
TWI81G0654 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 3.2e-06 55.1 74 45.9
MELO3C017124.2 Cucumis melo HOM05D003533 ORTHO05D004009 4.2e-06 54.7 85 41.2
RcHm_v2.0_Chr4g0444801 Rosa chinensis HOM05D003533 ORTHO05D004009 5.4e-06 54.3 81 43.2
BcaB03g12939 Brassica carinata HOM05D003533 ORTHO05D004009 7.1e-06 53.9 80 46.2
THA.LOC104821473 Tarenaya hassleriana HOM05D003533 ORTHO05D004009 9.3e-06 53.5 73 56.2


User provided reference genes

Program Settings