Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0178291 Rosa chinensis HOM05D000149 ORTHO05D000076 5.2e-34 147.1 74 100.0
RcHm_v2.0_Chr7g0178281 Rosa chinensis HOM05D000149 ORTHO05D000076 3.4e-33 144.4 74 95.9
RcHm_v2.0_Chr7g0179001 Rosa chinensis HOM05D000149 ORTHO05D000076 3.5e-30 134.4 74 90.5
RcHm_v2.0_Chr7g0179031 Rosa chinensis HOM05D000149 ORTHO05D000076 6.0e-22 107.1 76 69.7
FvH4_5g16970 Fragaria vesca HOM05D000149 ORTHO05D000076 2.1e-19 98.6 76 68.4
FAN18G0880 Fragaria x ananassa HOM05D000149 ORTHO05D000076 7.6e-17 90.1 72 65.3
FAN13G0927 Fragaria x ananassa HOM05D000149 ORTHO05D000076 2.9e-16 88.2 68 67.6
RcHm_v2.0_Chr1g0327261 Rosa chinensis HOM05D000149 ORTHO05D000076 3.8e-16 87.8 77 58.4
RcHm_v2.0_Chr7g0179051 Rosa chinensis HOM05D000149 ORTHO05D000076 6.4e-16 87.0 76 57.9
RcHm_v2.0_Chr7g0179021 Rosa chinensis HOM05D000149 ORTHO05D000076 5.4e-15 84.0 77 58.4
FAN04G0066 Fragaria x ananassa HOM05D000149 ORTHO05D000076 2.7e-14 81.6 68 58.8
Prupe.5G228700 Prunus persica HOM05D000149 ORTHO05D000076 3.9e-13 77.8 75 53.3
RcHm_v2.0_Chr7g0201901 Rosa chinensis HOM05D000149 ORTHO05D000076 2.5e-12 75.1 76 51.3
Prupe.5G228900 Prunus persica HOM05D000149 ORTHO05D000076 4.3e-12 74.3 76 50.0
MD06G1223600 Malus domestica HOM05D000149 ORTHO05D000076 9.6e-12 73.2 71 53.5
MD14G1232900 Malus domestica HOM05D000149 ORTHO05D000076 1.3e-11 72.8 72 54.2
RcHm_v2.0_Chr7g0201881 Rosa chinensis HOM05D000149 ORTHO05D000076 3.7e-11 71.2 78 48.7
Prupe.5G228500 Prunus persica HOM05D000149 ORTHO05D000076 4.8e-11 70.9 75 57.3
Dinv19664 Davidia involucrata HOM05D000149 ORTHO05D000076 8.1e-11 70.1 73 49.3
Prupe.5G228600 Prunus persica HOM05D000149 ORTHO05D000076 3.1e-10 68.2 71 52.1
RcHm_v2.0_Chr3g0486051 Rosa chinensis HOM05D000149 ORTHO05D000076 5.3e-10 67.4 78 48.7
RcHm_v2.0_Chr3g0486091 Rosa chinensis HOM05D000149 ORTHO05D000076 5.3e-10 67.4 77 49.4
Prupe.8G008300 Prunus persica HOM05D000149 ORTHO05D000076 9.0e-10 66.6 68 52.9
RcHm_v2.0_Chr2g0128631 Rosa chinensis HOM05D000149 ORTHO05D000076 9.0e-10 66.6 59 55.9
RcHm_v2.0_Chr7g0178951 Rosa chinensis HOM05D000149 ORTHO05D000076 1.2e-09 66.2 66 51.5
RcHm_v2.0_Chr4g0400921 Rosa chinensis HOM05D000149 ORTHO05D000076 2.6e-09 65.1 71 47.9
FAN06G2908 Fragaria x ananassa HOM05D000149 ORTHO05D000076 4.5e-09 64.3 74 45.9
MD10G1005900 Malus domestica HOM05D000149 ORTHO05D000076 5.8e-09 63.9 68 52.9
MD05G1007900 Malus domestica HOM05D000149 ORTHO05D000076 1.0e-08 63.2 70 47.1
FvH4_7g18490 Fragaria vesca HOM05D000149 ORTHO05D000076 1.3e-08 62.8 74 44.6
FAN06G0422 Fragaria x ananassa HOM05D000149 ORTHO05D000076 1.3e-08 62.8 74 44.6
MD06G1223800 Malus domestica HOM05D000149 ORTHO05D000076 1.3e-08 62.8 70 50.0
MD14G1232400 Malus domestica HOM05D000149 ORTHO05D000076 1.3e-08 62.8 70 50.0
Prupe.5G228800 Prunus persica HOM05D000149 ORTHO05D000076 1.3e-08 62.8 79 46.8
RcHm_v2.0_Chr4g0400991 Rosa chinensis HOM05D000149 ORTHO05D000076 1.3e-08 62.8 70 48.6
RcHm_v2.0_Chr7g0178961 Rosa chinensis HOM05D000149 ORTHO05D000076 1.7e-08 62.4 77 48.1
MD06G1223500 Malus domestica HOM05D000149 ORTHO05D000076 2.2e-08 62.0 73 50.7
MD06G1223700 Malus domestica HOM05D000149 ORTHO05D000076 2.2e-08 62.0 75 50.7
MD10G1005200 Malus domestica HOM05D000149 ORTHO05D000076 3.8e-08 61.2 68 50.0
RcHm_v2.0_Chr7g0187641 Rosa chinensis HOM05D000149 ORTHO05D000076 3.8e-08 61.2 73 46.6
MD09G1254300 Malus domestica HOM05D000149 ORTHO05D000076 4.9e-08 60.8 57 56.1
MD14G1233000 Malus domestica HOM05D000149 ORTHO05D000076 6.5e-08 60.5 72 44.4
RcHm_v2.0_Chr2g0137031 Rosa chinensis HOM05D000149 ORTHO05D000076 8.4e-08 60.1 60 53.3
Dinv10418 Davidia involucrata HOM05D000149 ORTHO05D000076 1.1e-07 59.7 76 43.4
Dinv19750 Davidia involucrata HOM05D000149 ORTHO05D000076 1.1e-07 59.7 76 43.4
MD14G1232700 Malus domestica HOM05D000149 ORTHO05D000076 2.5e-07 58.5 72 48.6
MD15G1255300 Malus domestica HOM05D000149 ORTHO05D000076 2.5e-07 58.5 73 45.2
Nn6g34657 Nelumbo nucifera HOM05D000149 ORTHO05D000076 3.2e-07 58.2 78 42.3
CiPaw.16G090400 Carya illinoinensis HOM05D000149 ORTHO05D000076 4.2e-07 57.8 73 41.1
FvH4_4g07940 Fragaria vesca HOM05D000149 ORTHO05D000076 4.2e-07 57.8 55 49.1
QL10p027354 Quercus lobata HOM05D000149 ORTHO05D000076 4.2e-07 57.8 76 40.8
RcHm_v2.0_Chr7g0178991 Rosa chinensis HOM05D000149 ORTHO05D000076 4.2e-07 57.8 68 44.1
TAR629G2309 Trochodendron aralioides HOM05D000149 ORTHO05D000076 5.5e-07 57.4 73 39.7
FAN12G0949 Fragaria x ananassa HOM05D000149 ORTHO05D000076 9.3e-07 56.6 50 52.0
Dinv19753 Davidia involucrata HOM05D000149 ORTHO05D000076 1.2e-06 56.2 76 42.1
FAN01G1979 Fragaria x ananassa HOM05D000149 ORTHO05D000076 1.2e-06 56.2 54 50.0
MD09G1254000 Malus domestica HOM05D000149 ORTHO05D000076 1.2e-06 56.2 74 47.3
MD14G1232800 Malus domestica HOM05D000149 ORTHO05D000076 1.6e-06 55.8 72 45.8
Aqoxy1G01070 Aquilegia oxysepala HOM05D000149 ORTHO05D000076 2.1e-06 55.5 65 40.0
MD02G1312500 Malus domestica HOM05D000149 ORTHO05D000076 2.1e-06 55.5 73 43.8
MD09G1253900 Malus domestica HOM05D000149 ORTHO05D000076 2.1e-06 55.5 63 49.2
QL10p027335 Quercus lobata HOM05D000149 ORTHO05D000076 2.7e-06 55.1 73 41.1
Dinv10416 Davidia involucrata HOM05D000149 ORTHO05D000076 3.5e-06 54.7 76 39.5
MD02G1312100 Malus domestica HOM05D000149 ORTHO05D000076 3.5e-06 54.7 76 43.4
Eucgr.K02257 Eucalyptus grandis HOM05D000149 ORTHO05D000076 4.6e-06 54.3 74 44.6
CiPaw.16G090300 Carya illinoinensis HOM05D000149 ORTHO05D000076 6.0e-06 53.9 72 43.1
Sp7g34140 Schrenkiella parvula HOM05D000149 ORTHO05D000076 7.9e-06 53.5 62 48.4
Sc04g0003220 Simmondsia chinensis HOM05D000149 ORTHO05D000076 7.9e-06 53.5 69 42.0


User provided reference genes

Program Settings